Protein–RNA interactions for Protein: P25515

VMA3, V-type proton ATPase subunit c, yeastyeast

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA3P25515 YML009W-BYML009W-B 477 nt17.19■□□□□ 0.34
VMA3P25515 NSR1YGR159C 1245 nt17.13■□□□□ 0.33
VMA3P25515 NOP1YDL014W 984 nt16.66■□□□□ 0.26
VMA3P25515 MDJ1YFL016C 1536 nt15.5■□□□□ 0.07
VMA3P25515 YKL036CYKL036C 393 nt15.26■□□□□ 0.03
VMA3P25515 SRX1YKL086W 384 nt14.51□□□□□ -0.09
VMA3P25515 Q0297Q0297 156 nt14.5□□□□□ -0.09
VMA3P25515 Q0182Q0182 405 nt14.33□□□□□ -0.12
VMA3P25515 YJL027CYJL027C 417 nt14.26□□□□□ -0.13
VMA3P25515 MOT3YMR070W 1473 nt14.16□□□□□ -0.14
VMA3P25515 YCR051WYCR051W 669 nt13.83□□□□□ -0.2
VMA3P25515 SCS3YGL126W 1143 nt13.82□□□□□ -0.2
VMA3P25515 DBP2YNL112W 1641 nt13.53□□□□□ -0.24
VMA3P25515 YBR190WYBR190W 312 nt13.25□□□□□ -0.29
VMA3P25515 YOL085CYOL085C 342 nt13.21□□□□□ -0.29
VMA3P25515 TRN1tP(UGG)A 72 nt13.17□□□□□ -0.3
VMA3P25515 SUF9tP(UGG)F 72 nt13.17□□□□□ -0.3
VMA3P25515 SUF8tP(UGG)H 72 nt13.17□□□□□ -0.3
VMA3P25515 tP(UGG)LtP(UGG)L 72 nt13.17□□□□□ -0.3
VMA3P25515 SUF7tP(UGG)M 72 nt13.17□□□□□ -0.3
VMA3P25515 tP(UGG)N1tP(UGG)N1 72 nt13.17□□□□□ -0.3
VMA3P25515 tP(UGG)N2tP(UGG)N2 72 nt13.17□□□□□ -0.3
VMA3P25515 tP(UGG)O1tP(UGG)O1 72 nt13.17□□□□□ -0.3
VMA3P25515 SUF11tP(UGG)O2 72 nt13.17□□□□□ -0.3
VMA3P25515 CCC1YLR220W 969 nt13.13□□□□□ -0.31
VMA3P25515 PKP1YIL042C 1185 nt13.06□□□□□ -0.32
VMA3P25515 RPP1BYDL130W 321 nt13.03□□□□□ -0.32
VMA3P25515 RTC3YHR087W 336 nt13□□□□□ -0.33
VMA3P25515 RVS167YDR388W 1449 nt12.71□□□□□ -0.37
VMA3P25515 SCJ1YMR214W 1134 nt12.57□□□□□ -0.4
VMA3P25515 NME1NME1 340 nt12.55□□□□□ -0.4
VMA3P25515 YGR139WYGR139W 339 nt12.54□□□□□ -0.4
VMA3P25515 PET122YER153C 765 nt12.46□□□□□ -0.41
VMA3P25515 tP(UGG)O3tP(UGG)O3 72 nt12.46□□□□□ -0.41
VMA3P25515 SCR1SCR1 522 nt12.34□□□□□ -0.43
VMA3P25515 ATS1YAL020C 1002 nt12.33□□□□□ -0.44
VMA3P25515 PUT4YOR348C 1884 nt12.29□□□□□ -0.44
VMA3P25515 SSA3YBL075C 1950 nt12.25□□□□□ -0.45
VMA3P25515 SHR5YOL110W 714 nt12.21□□□□□ -0.45
VMA3P25515 RRN5YLR141W 1092 nt12.11□□□□□ -0.47
VMA3P25515 URN1YPR152C 1398 nt12.03□□□□□ -0.48
VMA3P25515 YDJ1YNL064C 1230 nt12.02□□□□□ -0.49
VMA3P25515 ARE1YCR048W 1833 nt11.98□□□□□ -0.49
VMA3P25515 DEP1YAL013W 1218 nt11.96□□□□□ -0.49
VMA3P25515 SAH1YER043C 1350 nt11.93□□□□□ -0.5
VMA3P25515 POA1YBR022W 534 nt11.91□□□□□ -0.5
VMA3P25515 OPI9YLR338W 858 nt11.89□□□□□ -0.51
VMA3P25515 YER088W-BYER088W-B 147 nt11.86□□□□□ -0.51
VMA3P25515 YHR049C-AYHR049C-A 297 nt11.85□□□□□ -0.51
VMA3P25515 RSB1YOR049C 1065 nt11.85□□□□□ -0.51
VMA3P25515 GAR1YHR089C 618 nt11.83□□□□□ -0.52
VMA3P25515 RPN10YHR200W 807 nt11.77□□□□□ -0.53
VMA3P25515 YNL208WYNL208W 600 nt11.71□□□□□ -0.53
VMA3P25515 BSC6YOL137W 1494 nt11.7□□□□□ -0.54
VMA3P25515 CSM2YIL132C 642 nt11.61□□□□□ -0.55
VMA3P25515 BUD23YCR047C 828 nt11.58□□□□□ -0.56
VMA3P25515 PUN1YLR414C 792 nt11.55□□□□□ -0.56
VMA3P25515 PTC2YER089C 1395 nt11.49□□□□□ -0.57
VMA3P25515 YJR018WYJR018W 363 nt11.45□□□□□ -0.58
VMA3P25515 PST2YDR032C 597 nt11.42□□□□□ -0.58
VMA3P25515 TIR1YER011W 765 nt11.42□□□□□ -0.58
VMA3P25515 NAB2YGL122C 1578 nt11.37□□□□□ -0.59
VMA3P25515 SPT5YML010W 3192 nt11.33□□□□□ -0.6
VMA3P25515 SSA1YAL005C 1929 nt11.28□□□□□ -0.6
VMA3P25515 PAU21YOR394W 495 nt11.27□□□□□ -0.61
VMA3P25515 PAU22YPL282C 495 nt11.27□□□□□ -0.61
VMA3P25515 YJR120WYJR120W 351 nt11.18□□□□□ -0.62
VMA3P25515 FPR4YLR449W 1179 nt11.18□□□□□ -0.62
VMA3P25515 FIS1YIL065C 468 nt11.17□□□□□ -0.62
VMA3P25515 RPP2BYDR382W 333 nt11.16□□□□□ -0.62
VMA3P25515 DAL1YIR027C 1383 nt11.16□□□□□ -0.62
VMA3P25515 ARO7YPR060C 771 nt11.14□□□□□ -0.63
VMA3P25515 SSA4YER103W 1929 nt11.13□□□□□ -0.63
VMA3P25515 INM2YDR287W 879 nt11.06□□□□□ -0.64
VMA3P25515 PHO4YFR034C 939 nt11.06□□□□□ -0.64
VMA3P25515 SRB2YHR041C 633 nt11.05□□□□□ -0.64
VMA3P25515 MEP2YNL142W 1500 nt11.01□□□□□ -0.65
VMA3P25515 MET8YBR213W 825 nt11.01□□□□□ -0.65
VMA3P25515 SHU1YHL006C 453 nt10.99□□□□□ -0.65
VMA3P25515 YPS1YLR120C 1710 nt10.95□□□□□ -0.66
VMA3P25515 YKL097CYKL097C 411 nt10.94□□□□□ -0.66
VMA3P25515 YBL100CYBL100C 315 nt10.93□□□□□ -0.66
VMA3P25515 CLB6YGR109C 1143 nt10.92□□□□□ -0.66
VMA3P25515 WWM1YFL010C 636 nt10.9□□□□□ -0.66
VMA3P25515 YAL037C-BYAL037C-B 975 nt10.9□□□□□ -0.66
VMA3P25515 YHR165W-AYHR165W-A 312 nt10.88□□□□□ -0.67
VMA3P25515 BDH2YAL061W 1254 nt10.88□□□□□ -0.67
VMA3P25515 DCW1YKL046C 1350 nt10.85□□□□□ -0.67
VMA3P25515 YDR095CYDR095C 411 nt10.82□□□□□ -0.68
VMA3P25515 YGR021WYGR021W 873 nt10.79□□□□□ -0.68
VMA3P25515 FUN26YAL022C 1554 nt10.78□□□□□ -0.68
VMA3P25515 REG2YBR050C 1017 nt10.75□□□□□ -0.69
VMA3P25515 TRM9YML014W 840 nt10.74□□□□□ -0.69
VMA3P25515 HOM6YJR139C 1080 nt10.73□□□□□ -0.69
VMA3P25515 LSM3YLR438C-A 270 nt10.72□□□□□ -0.69
VMA3P25515 ALF1YNL148C 765 nt10.71□□□□□ -0.69
VMA3P25515 BDF1YLR399C 2061 nt10.7□□□□□ -0.7
VMA3P25515 YFL021C-AYFL021C-A 855 nt10.7□□□□□ -0.7
VMA3P25515 EMI2YDR516C 1503 nt10.69□□□□□ -0.7
VMA3P25515 MNP1YGL068W 585 nt10.69□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms