RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W SGM1P47166 707 aa3.73□□□□□ -1.81
BCD1YHR040W MAL13P53338 473 aa3.73□□□□□ -1.81
BCD1YHR040W SEC5P89102 971 aa3.73□□□□□ -1.81
BCD1YHR040W MDM1Q01846 1127 aa3.73□□□□□ -1.81
BCD1YHR040W YVH1Q02256 364 aaKnown RBP3.73□□□□□ -1.81
BCD1YHR040W VPS30Q02948 557 aa3.73□□□□□ -1.81
BCD1YHR040W VPS38Q05919 439 aa3.73□□□□□ -1.81
BCD1YHR040W MLC2Q06580 163 aa3.73□□□□□ -1.81
BCD1YHR040W VIP1Q06685 1146 aaKnown RBP3.73□□□□□ -1.81
BCD1YHR040W OPY2Q06810 360 aa3.73□□□□□ -1.81
BCD1YHR040W NBA1Q08229 501 aaKnown RBP3.73□□□□□ -1.81
BCD1YHR040W SLK19Q08581 821 aaKnown RBP3.73□□□□□ -1.81
BCD1YHR040W DSE3Q08729 430 aa3.73□□□□□ -1.81
BCD1YHR040W ERP4Q12450 207 aa3.73□□□□□ -1.81
BCD1YHR040W RTP1Q12751 981 aa3.73□□□□□ -1.81
BCD1YHR040W FIG2P25653 1609 aa3.73□□□□□ -1.81
BCD1YHR040W NUC1P08466 329 aa3.72□□□□□ -1.81
BCD1YHR040W MPH2P0CD99 609 aa3.72□□□□□ -1.81
BCD1YHR040W MSD1P15179 658 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W OM45P16547 393 aa3.72□□□□□ -1.81
BCD1YHR040W MSM1P22438 575 aa3.72□□□□□ -1.81
BCD1YHR040W PCL2P25693 308 aa3.72□□□□□ -1.81
BCD1YHR040W MCM4P30665 933 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W SRB4P32569 687 aa3.72□□□□□ -1.81
BCD1YHR040W PUB1P32588 453 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
BCD1YHR040W TOA1P32773 286 aa3.72□□□□□ -1.81
BCD1YHR040W YSC84P32793 468 aa3.72□□□□□ -1.81
BCD1YHR040W NIC96P34077 839 aa3.72□□□□□ -1.81
BCD1YHR040W CST26P38226 397 aa3.72□□□□□ -1.81
BCD1YHR040W PTC7P38797 343 aa3.72□□□□□ -1.81
BCD1YHR040W SPT8P38915 602 aa3.72□□□□□ -1.81
BCD1YHR040W SHC1P39000 512 aa3.72□□□□□ -1.81
BCD1YHR040W STT3P39007 718 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W SIP5P40210 489 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W NDC80P40460 691 aa3.72□□□□□ -1.81
BCD1YHR040W CSM2P40465 213 aa3.72□□□□□ -1.81
BCD1YHR040W HOS4P40480 1083 aa3.72□□□□□ -1.81
BCD1YHR040W MPH1P40562 993 aa3.72□□□□□ -1.81
BCD1YHR040W THI6P41835 540 aa3.72□□□□□ -1.81
BCD1YHR040W RSC8P43609 557 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W NIT2P47016 307 aa3.72□□□□□ -1.81
BCD1YHR040W YJR096WP47137 282 aa3.72□□□□□ -1.81
BCD1YHR040W COS5P47187 383 aa3.72□□□□□ -1.81
BCD1YHR040W APT1P49435 187 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W MET13P53128 600 aa3.72□□□□□ -1.81
BCD1YHR040W SSL2Q00578 843 aa3.72□□□□□ -1.81
BCD1YHR040W SDH1Q00711 640 aa3.72□□□□□ -1.81
BCD1YHR040W YLR287CQ05881 355 aa3.72□□□□□ -1.81
BCD1YHR040W SKG3Q06315 1026 aa3.72□□□□□ -1.81
BCD1YHR040W BRE4Q07660 1125 aa3.72□□□□□ -1.81
BCD1YHR040W YTM1Q12024 460 aaPredicted RBP3.72□□□□□ -1.81
BCD1YHR040W DUR1,2P32528 1835 aaKnown RBP3.72□□□□□ -1.81
BCD1YHR040W CDC9P04819 755 aa3.71□□□□□ -1.82
BCD1YHR040W SFL1P20134 766 aa3.71□□□□□ -1.82
BCD1YHR040W SPO11P23179 398 aa3.71□□□□□ -1.82
BCD1YHR040W STE11P23561 717 aa3.71□□□□□ -1.82
BCD1YHR040W RPC53P25441 422 aa3.71□□□□□ -1.82
BCD1YHR040W BYE1P36106 594 aa3.71□□□□□ -1.82
BCD1YHR040W JNM1P36224 373 aa3.71□□□□□ -1.82
BCD1YHR040W YBR284WP38150 797 aa3.71□□□□□ -1.82
BCD1YHR040W EXO84P38261 753 aa3.71□□□□□ -1.82
BCD1YHR040W CCZ1P38273 704 aa3.71□□□□□ -1.82
BCD1YHR040W CKB2P38930 258 aa3.71□□□□□ -1.82
BCD1YHR040W PEX7P39108 375 aa3.71□□□□□ -1.82
BCD1YHR040W SAH1P39954 449 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W SAP185P40856 1058 aa3.71□□□□□ -1.82
BCD1YHR040W GTS1P40956 396 aa3.71□□□□□ -1.82
BCD1YHR040W GZF3P42944 551 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W GSM1P42950 618 aa3.71□□□□□ -1.82
BCD1YHR040W TAF1P46677 1066 aa3.71□□□□□ -1.82
BCD1YHR040W FOL2P51601 243 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W UBA2P52488 636 aa3.71□□□□□ -1.82
BCD1YHR040W VID30P53076 958 aa3.71□□□□□ -1.82
BCD1YHR040W SOL4P53315 255 aa3.71□□□□□ -1.82
BCD1YHR040W TNA1P53322 534 aa3.71□□□□□ -1.82
BCD1YHR040W CBK1P53894 756 aa3.71□□□□□ -1.82
BCD1YHR040W SNP1Q00916 300 aaPredicted RBP3.71□□□□□ -1.82
BCD1YHR040W RNT1Q02555 471 aa3.71□□□□□ -1.82
BCD1YHR040W MFM1Q02783 413 aa3.71□□□□□ -1.82
BCD1YHR040W EBS1Q03466 884 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W BUL2Q03758 920 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W SSY1Q03770 852 aa3.71□□□□□ -1.82
BCD1YHR040W SPP382Q06411 708 aaPredicted RBP3.71□□□□□ -1.82
BCD1YHR040W YLH47Q06493 454 aa3.71□□□□□ -1.82
BCD1YHR040W TLG2Q08144 397 aa3.71□□□□□ -1.82
BCD1YHR040W AFT2Q08957 416 aa3.71□□□□□ -1.82
BCD1YHR040W HMI1Q12039 706 aa3.71□□□□□ -1.82
BCD1YHR040W SMC6Q12749 1114 aa3.71□□□□□ -1.82
BCD1YHR040W GLT1Q12680 2145 aaKnown RBP3.71□□□□□ -1.82
BCD1YHR040W TUS1Q06412 1307 aa3.7□□□□□ -1.82
BCD1YHR040W TUF1P02992 437 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W RAD18P10862 487 aa3.7□□□□□ -1.82
BCD1YHR040W CAF20P12962 161 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W PET123P17558 318 aa3.7□□□□□ -1.82
BCD1YHR040W VPS1P21576 704 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W RPS7AP26786 190 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W PRO3P32263 286 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W AAR2P32357 355 aaPredicted RBP3.7□□□□□ -1.82
BCD1YHR040W PRP19P32523 503 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W AIM26P32858 118 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms