Protein–RNA interactions for Protein: P23179

SPO11, Meiosis-specific protein SPO11, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPO11P23179 NSR1YGR159C 1245 nt22.12■■□□□ 1.13
SPO11P23179 YML009W-BYML009W-B 477 nt22.09■■□□□ 1.13
SPO11P23179 NOP1YDL014W 984 nt21.29■■□□□ 1
SPO11P23179 MDJ1YFL016C 1536 nt20.01■□□□□ 0.79
SPO11P23179 YKL036CYKL036C 393 nt19.76■□□□□ 0.75
SPO11P23179 SRX1YKL086W 384 nt18.61■□□□□ 0.57
SPO11P23179 Q0297Q0297 156 nt18.59■□□□□ 0.57
SPO11P23179 YJL027CYJL027C 417 nt18.49■□□□□ 0.55
SPO11P23179 SCS3YGL126W 1143 nt18.18■□□□□ 0.5
SPO11P23179 YCR051WYCR051W 669 nt17.7■□□□□ 0.42
SPO11P23179 DBP2YNL112W 1641 nt17.55■□□□□ 0.4
SPO11P23179 YOL085CYOL085C 342 nt17.15■□□□□ 0.34
SPO11P23179 YBR190WYBR190W 312 nt17.05■□□□□ 0.32
SPO11P23179 TRN1tP(UGG)A 72 nt17.01■□□□□ 0.31
SPO11P23179 SUF9tP(UGG)F 72 nt17.01■□□□□ 0.31
SPO11P23179 SUF8tP(UGG)H 72 nt17.01■□□□□ 0.31
SPO11P23179 tP(UGG)LtP(UGG)L 72 nt17.01■□□□□ 0.31
SPO11P23179 SUF7tP(UGG)M 72 nt17.01■□□□□ 0.31
SPO11P23179 tP(UGG)N1tP(UGG)N1 72 nt17.01■□□□□ 0.31
SPO11P23179 tP(UGG)N2tP(UGG)N2 72 nt17.01■□□□□ 0.31
SPO11P23179 tP(UGG)O1tP(UGG)O1 72 nt17.01■□□□□ 0.31
SPO11P23179 SUF11tP(UGG)O2 72 nt17.01■□□□□ 0.31
SPO11P23179 CCC1YLR220W 969 nt16.92■□□□□ 0.3
SPO11P23179 PKP1YIL042C 1185 nt16.87■□□□□ 0.29
SPO11P23179 RTC3YHR087W 336 nt16.73■□□□□ 0.27
SPO11P23179 RPP1BYDL130W 321 nt16.68■□□□□ 0.26
SPO11P23179 SCJ1YMR214W 1134 nt16.42■□□□□ 0.22
SPO11P23179 RVS167YDR388W 1449 nt16.39■□□□□ 0.21
SPO11P23179 ATS1YAL020C 1002 nt16.34■□□□□ 0.21
SPO11P23179 tP(UGG)O3tP(UGG)O3 72 nt16.01■□□□□ 0.15
SPO11P23179 PET122YER153C 765 nt16■□□□□ 0.15
SPO11P23179 SHR5YOL110W 714 nt15.77■□□□□ 0.12
SPO11P23179 SCR1SCR1 522 nt15.75■□□□□ 0.11
SPO11P23179 PUT4YOR348C 1884 nt15.73■□□□□ 0.11
SPO11P23179 URN1YPR152C 1398 nt15.55■□□□□ 0.08
SPO11P23179 DEP1YAL013W 1218 nt15.51■□□□□ 0.07
SPO11P23179 RRN5YLR141W 1092 nt15.51■□□□□ 0.07
SPO11P23179 YDJ1YNL064C 1230 nt15.44■□□□□ 0.06
SPO11P23179 SAH1YER043C 1350 nt15.37■□□□□ 0.05
SPO11P23179 ARE1YCR048W 1833 nt15.37■□□□□ 0.05
SPO11P23179 OPI9YLR338W 858 nt15.33■□□□□ 0.04
SPO11P23179 SSA3YBL075C 1950 nt15.32■□□□□ 0.04
SPO11P23179 POA1YBR022W 534 nt15.26■□□□□ 0.03
SPO11P23179 RSB1YOR049C 1065 nt15.24■□□□□ 0.03
SPO11P23179 GAR1YHR089C 618 nt15.23■□□□□ 0.03
SPO11P23179 YER088W-BYER088W-B 147 nt15.21■□□□□ 0.03
SPO11P23179 YHR049C-AYHR049C-A 297 nt15.2■□□□□ 0.02
SPO11P23179 RPN10YHR200W 807 nt15.19■□□□□ 0.02
SPO11P23179 YNL208WYNL208W 600 nt15.15■□□□□ 0.02
SPO11P23179 PST2YDR032C 597 nt15.1■□□□□ 0.01
SPO11P23179 BSC6YOL137W 1494 nt14.96□□□□□ -0.01
SPO11P23179 PUN1YLR414C 792 nt14.87□□□□□ -0.03
SPO11P23179 BUD23YCR047C 828 nt14.85□□□□□ -0.03
SPO11P23179 PTC2YER089C 1395 nt14.79□□□□□ -0.04
SPO11P23179 YJR018WYJR018W 363 nt14.79□□□□□ -0.04
SPO11P23179 TIR1YER011W 765 nt14.7□□□□□ -0.06
SPO11P23179 YKL097CYKL097C 411 nt14.61□□□□□ -0.07
SPO11P23179 SSA1YAL005C 1929 nt14.6□□□□□ -0.07
SPO11P23179 NAB2YGL122C 1578 nt14.6□□□□□ -0.07
SPO11P23179 YJR120WYJR120W 351 nt14.53□□□□□ -0.08
SPO11P23179 SHU1YHL006C 453 nt14.43□□□□□ -0.1
SPO11P23179 FPR4YLR449W 1179 nt14.4□□□□□ -0.1
SPO11P23179 SPT5YML010W 3192 nt14.4□□□□□ -0.1
SPO11P23179 RPP2BYDR382W 333 nt14.39□□□□□ -0.11
SPO11P23179 FIS1YIL065C 468 nt14.39□□□□□ -0.11
SPO11P23179 SRB2YHR041C 633 nt14.36□□□□□ -0.11
SPO11P23179 DAL1YIR027C 1383 nt14.35□□□□□ -0.11
SPO11P23179 INM2YDR287W 879 nt14.26□□□□□ -0.13
SPO11P23179 PHO4YFR034C 939 nt14.25□□□□□ -0.13
SPO11P23179 YAL037C-BYAL037C-B 975 nt14.13□□□□□ -0.15
SPO11P23179 YBL100CYBL100C 315 nt14.12□□□□□ -0.15
SPO11P23179 BDH2YAL061W 1254 nt14.06□□□□□ -0.16
SPO11P23179 YOR139CYOR139C 393 nt14.06□□□□□ -0.16
SPO11P23179 YPS1YLR120C 1710 nt14.05□□□□□ -0.16
SPO11P23179 SSA4YER103W 1929 nt14.05□□□□□ -0.16
SPO11P23179 MEP2YNL142W 1500 nt14.05□□□□□ -0.16
SPO11P23179 WWM1YFL010C 636 nt14.04□□□□□ -0.16
SPO11P23179 YHR165W-AYHR165W-A 312 nt13.95□□□□□ -0.18
SPO11P23179 FUN26YAL022C 1554 nt13.95□□□□□ -0.18
SPO11P23179 YDR095CYDR095C 411 nt13.91□□□□□ -0.18
SPO11P23179 DCW1YKL046C 1350 nt13.88□□□□□ -0.19
SPO11P23179 TRM9YML014W 840 nt13.86□□□□□ -0.19
SPO11P23179 ALF1YNL148C 765 nt13.81□□□□□ -0.2
SPO11P23179 YGR021WYGR021W 873 nt13.79□□□□□ -0.2
SPO11P23179 LSM3YLR438C-A 270 nt13.79□□□□□ -0.2
SPO11P23179 NPL3YDR432W 1245 nt13.77□□□□□ -0.21
SPO11P23179 HOM6YJR139C 1080 nt13.77□□□□□ -0.21
SPO11P23179 YFL021C-AYFL021C-A 855 nt13.75□□□□□ -0.21
SPO11P23179 MNP1YGL068W 585 nt13.75□□□□□ -0.21
SPO11P23179 CCT6YDR188W 1641 nt13.71□□□□□ -0.22
SPO11P23179 PTP1YDL230W 1008 nt13.66□□□□□ -0.22
SPO11P23179 RPP2AYOL039W 321 nt13.66□□□□□ -0.22
SPO11P23179 EMI2YDR516C 1503 nt13.65□□□□□ -0.22
SPO11P23179 CAC2YML102W 1407 nt13.62□□□□□ -0.23
SPO11P23179 SUF2tP(AGG)C 72 nt13.6□□□□□ -0.23
SPO11P23179 SUF10tP(AGG)N 72 nt13.6□□□□□ -0.23
SPO11P23179 SIS1YNL007C 1059 nt13.58□□□□□ -0.24
SPO11P23179 RKM5YLR137W 1104 nt13.57□□□□□ -0.24
SPO11P23179 YOL037CYOL037C 354 nt13.55□□□□□ -0.24
SPO11P23179 YDL221WYDL221W 552 nt13.53□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms