RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W MTC1P47018 478 aaKnown RBP8.97□□□□□ -0.97
BCD1YHR040W DRS1P32892 752 aaKnown RBP8.9□□□□□ -0.98
BCD1YHR040W FAP1P53971 965 aa8.67□□□□□ -1.02
BCD1YHR040W PRY3P47033 881 aa8.22□□□□□ -1.09
BCD1YHR040W YCK3P39962 524 aa7.82□□□□□ -1.16
BCD1YHR040W BFR2Q06631 534 aaKnown RBP7.63□□□□□ -1.19
BCD1YHR040W DIP2Q12220 943 aaPredicted RBP7.61□□□□□ -1.19
BCD1YHR040W HAA1Q12753 694 aaKnown RBP7.6□□□□□ -1.19
BCD1YHR040W AAD16Q02895 342 aa7.58□□□□□ -1.2
BCD1YHR040W PRI1P10363 409 aa7.46□□□□□ -1.22
BCD1YHR040W AVT3P36062 692 aa7.42□□□□□ -1.22
BCD1YHR040W ISW2Q08773 1120 aa7.38□□□□□ -1.23
BCD1YHR040W RPG1P38249 964 aaKnown RBP7.27□□□□□ -1.25
BCD1YHR040W RSE1Q04693 1361 aaKnown RBP7.24□□□□□ -1.25
BCD1YHR040W TFA1P36100 482 aa7.01□□□□□ -1.29
BCD1YHR040W TSR3Q12094 313 aaKnown RBP7□□□□□ -1.29
BCD1YHR040W RPL17AP05740 184 aaKnown RBP6.98□□□□□ -1.29
BCD1YHR040W RPL17BP46990 184 aaKnown RBP6.98□□□□□ -1.29
BCD1YHR040W REB1P21538 810 aa6.94□□□□□ -1.3
BCD1YHR040W BUD31P25337 157 aaPredicted RBP6.85□□□□□ -1.31
BCD1YHR040W YGL015CP33199 130 aa6.78□□□□□ -1.32
BCD1YHR040W MRPL32P25348 183 aa6.71□□□□□ -1.34
BCD1YHR040W SPT21P35209 758 aa6.64□□□□□ -1.35
BCD1YHR040W RIM101P33400 625 aa6.53□□□□□ -1.36
BCD1YHR040W YKR023WP36119 530 aaKnown RBP6.47□□□□□ -1.37
BCD1YHR040W HOP09932 586 aa6.38□□□□□ -1.39
BCD1YHR040W CDC27P38042 758 aa6.38□□□□□ -1.39
BCD1YHR040W SIS1P25294 352 aaKnown RBP6.37□□□□□ -1.39
BCD1YHR040W TFC8Q12308 588 aa6.36□□□□□ -1.39
BCD1YHR040W DCD1P06773 312 aa6.33□□□□□ -1.4
BCD1YHR040W YIL055CP40523 627 aaKnown RBP6.33□□□□□ -1.4
BCD1YHR040W RQC2Q12532 1038 aaKnown RBP6.33□□□□□ -1.4
BCD1YHR040W OXP1P28273 1286 aa6.32□□□□□ -1.4
BCD1YHR040W PTP3P40048 928 aa6.29□□□□□ -1.4
BCD1YHR040W YAH1Q12184 172 aaKnown RBP6.27□□□□□ -1.41
BCD1YHR040W SSP1P38871 571 aa6.21□□□□□ -1.42
BCD1YHR040W INO80P53115 1489 aa6.19□□□□□ -1.42
BCD1YHR040W RSM7P47150 247 aa6.18□□□□□ -1.42
BCD1YHR040W BCH2P36122 765 aa6.17□□□□□ -1.42
BCD1YHR040W UBP10P53874 792 aaPredicted RBP6.17□□□□□ -1.42
BCD1YHR040W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
BCD1YHR040W MAP2P38174 421 aaKnown RBP6.15□□□□□ -1.42
BCD1YHR040W SCY1P53009 804 aa6.13□□□□□ -1.43
BCD1YHR040W YLR271WQ06152 274 aa6.13□□□□□ -1.43
BCD1YHR040W BBC1P47068 1157 aa6.09□□□□□ -1.43
BCD1YHR040W MON2P48563 1636 aaPredicted RBP6.08□□□□□ -1.44
BCD1YHR040W AI2P03876 854 aa6.08□□□□□ -1.44
BCD1YHR040W EPS1P40557 701 aa6.07□□□□□ -1.44
BCD1YHR040W UBP9P39967 754 aa6.06□□□□□ -1.44
BCD1YHR040W SLX5P32828 619 aaKnown RBP6.04□□□□□ -1.44
BCD1YHR040W BDF1P35817 686 aa6.02□□□□□ -1.45
BCD1YHR040W MGA2P40578 1113 aa6□□□□□ -1.45
BCD1YHR040W PSD2P53037 1138 aaKnown RBP5.97□□□□□ -1.45
BCD1YHR040W TIF4632P39936 914 aaKnown RBP5.96□□□□□ -1.46
BCD1YHR040W CST9Q06032 482 aa5.94□□□□□ -1.46
BCD1YHR040W TAF7Q05021 590 aa5.91□□□□□ -1.46
BCD1YHR040W MRM1P25270 412 aa5.9□□□□□ -1.46
BCD1YHR040W TGL3P40308 642 aa5.88□□□□□ -1.47
BCD1YHR040W DNA2P38859 1522 aa5.82□□□□□ -1.48
BCD1YHR040W RTG3P38165 486 aa5.81□□□□□ -1.48
BCD1YHR040W SGS1P35187 1447 aa5.79□□□□□ -1.48
BCD1YHR040W MIF2P35201 549 aa5.76□□□□□ -1.49
BCD1YHR040W DMA1P38823 416 aa5.75□□□□□ -1.49
BCD1YHR040W YAP5P40574 245 aa5.75□□□□□ -1.49
BCD1YHR040W RCR1P38212 213 aa5.74□□□□□ -1.49
BCD1YHR040W NSR1P27476 414 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
BCD1YHR040W YOR238WQ08634 303 aa5.73□□□□□ -1.49
BCD1YHR040W VPS29P38759 282 aa5.71□□□□□ -1.5
BCD1YHR040W YMR1P47147 688 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
BCD1YHR040W SPA2P23201 1466 aaKnown RBP5.71□□□□□ -1.5
BCD1YHR040W RAM2P29703 316 aa5.7□□□□□ -1.5
BCD1YHR040W DBP1P24784 617 aaKnown RBP5.68□□□□□ -1.5
BCD1YHR040W PIB1Q06651 286 aa5.68□□□□□ -1.5
BCD1YHR040W YFR006WP43590 535 aa5.67□□□□□ -1.5
BCD1YHR040W KOG1P38873 1557 aa5.65□□□□□ -1.5
BCD1YHR040W GTT3P39996 337 aa5.65□□□□□ -1.5
BCD1YHR040W MST1P07236 462 aa5.64□□□□□ -1.51
BCD1YHR040W MAK11P20484 414 aaKnown RBP5.64□□□□□ -1.51
BCD1YHR040W STS1P38637 319 aa5.64□□□□□ -1.51
BCD1YHR040W YBL029C-AQ3E756 94 aa5.62□□□□□ -1.51
BCD1YHR040W TCB3Q03640 1545 aaKnown RBP5.6□□□□□ -1.51
BCD1YHR040W VMA1P17255 1071 aaKnown RBP5.57□□□□□ -1.52
BCD1YHR040W SET1P38827 1080 aaKnown RBP5.57□□□□□ -1.52
BCD1YHR040W COQ8P27697 501 aa5.56□□□□□ -1.52
BCD1YHR040W LEO1P38439 464 aa5.56□□□□□ -1.52
BCD1YHR040W WSC3Q12215 556 aa5.56□□□□□ -1.52
BCD1YHR040W SSN2P38931 1420 aa5.52□□□□□ -1.53
BCD1YHR040W EDS1P38073 919 aa5.51□□□□□ -1.53
BCD1YHR040W PTC3P34221 468 aaKnown RBP5.5□□□□□ -1.53
BCD1YHR040W SET4P42948 560 aa5.5□□□□□ -1.53
BCD1YHR040W IFH1P39520 1085 aa5.49□□□□□ -1.53
BCD1YHR040W YOL036WQ08206 761 aa5.49□□□□□ -1.53
BCD1YHR040W SAM3Q08986 587 aa5.49□□□□□ -1.53
BCD1YHR040W NOP53Q12080 455 aaKnown RBP5.49□□□□□ -1.53
BCD1YHR040W GYP5Q12344 894 aa5.49□□□□□ -1.53
BCD1YHR040W AIR2Q12476 344 aaKnown RBP5.49□□□□□ -1.53
BCD1YHR040W VNX1P42839 908 aa5.48□□□□□ -1.53
BCD1YHR040W ATH1P48016 1211 aa5.48□□□□□ -1.53
BCD1YHR040W GRE2Q12068 342 aaKnown RBP5.48□□□□□ -1.53
BCD1YHR040W MSB4Q12317 492 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms