Protein–RNA interactions for Protein: Q00916

SNP1, U1 small nuclear ribonucleoprotein 70 kDa homolog, yeastyeast

Predicted RBP Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNP1Q00916 YML009W-BYML009W-B 477 nt19.15■□□□□ 0.66
SNP1Q00916 NSR1YGR159C 1245 nt18.89■□□□□ 0.61
SNP1Q00916 NOP1YDL014W 984 nt18.71■□□□□ 0.59
SNP1Q00916 YKL036CYKL036C 393 nt17.35■□□□□ 0.37
SNP1Q00916 MDJ1YFL016C 1536 nt16.61■□□□□ 0.25
SNP1Q00916 Q0297Q0297 156 nt16.36■□□□□ 0.21
SNP1Q00916 SRX1YKL086W 384 nt16.29■□□□□ 0.2
SNP1Q00916 YJL027CYJL027C 417 nt16.23■□□□□ 0.19
SNP1Q00916 SCS3YGL126W 1143 nt15.81■□□□□ 0.12
SNP1Q00916 YCR051WYCR051W 669 nt15.5■□□□□ 0.07
SNP1Q00916 YOL085CYOL085C 342 nt14.98□□□□□ -0.01
SNP1Q00916 PKP1YIL042C 1185 nt14.74□□□□□ -0.05
SNP1Q00916 DBP2YNL112W 1641 nt14.69□□□□□ -0.06
SNP1Q00916 RPP1BYDL130W 321 nt14.68□□□□□ -0.06
SNP1Q00916 TRN1tP(UGG)A 72 nt14.63□□□□□ -0.07
SNP1Q00916 SUF9tP(UGG)F 72 nt14.63□□□□□ -0.07
SNP1Q00916 SUF8tP(UGG)H 72 nt14.63□□□□□ -0.07
SNP1Q00916 tP(UGG)LtP(UGG)L 72 nt14.63□□□□□ -0.07
SNP1Q00916 SUF7tP(UGG)M 72 nt14.63□□□□□ -0.07
SNP1Q00916 tP(UGG)N1tP(UGG)N1 72 nt14.63□□□□□ -0.07
SNP1Q00916 tP(UGG)N2tP(UGG)N2 72 nt14.63□□□□□ -0.07
SNP1Q00916 tP(UGG)O1tP(UGG)O1 72 nt14.63□□□□□ -0.07
SNP1Q00916 SUF11tP(UGG)O2 72 nt14.63□□□□□ -0.07
SNP1Q00916 CCC1YLR220W 969 nt14.52□□□□□ -0.09
SNP1Q00916 SCJ1YMR214W 1134 nt14.21□□□□□ -0.13
SNP1Q00916 ATS1YAL020C 1002 nt14.18□□□□□ -0.14
SNP1Q00916 YBR190WYBR190W 312 nt14.16□□□□□ -0.14
SNP1Q00916 RVS167YDR388W 1449 nt14.01□□□□□ -0.17
SNP1Q00916 PET122YER153C 765 nt13.99□□□□□ -0.17
SNP1Q00916 SCR1SCR1 522 nt13.97□□□□□ -0.17
SNP1Q00916 RTC3YHR087W 336 nt13.91□□□□□ -0.18
SNP1Q00916 tP(UGG)O3tP(UGG)O3 72 nt13.89□□□□□ -0.19
SNP1Q00916 Q0182Q0182 405 nt13.87□□□□□ -0.19
SNP1Q00916 RRN5YLR141W 1092 nt13.61□□□□□ -0.23
SNP1Q00916 SHR5YOL110W 714 nt13.49□□□□□ -0.25
SNP1Q00916 YDJ1YNL064C 1230 nt13.46□□□□□ -0.25
SNP1Q00916 RSB1YOR049C 1065 nt13.41□□□□□ -0.26
SNP1Q00916 YER088W-BYER088W-B 147 nt13.33□□□□□ -0.28
SNP1Q00916 MOT3YMR070W 1473 nt13.29□□□□□ -0.28
SNP1Q00916 GAR1YHR089C 618 nt13.14□□□□□ -0.31
SNP1Q00916 PST2YDR032C 597 nt13.09□□□□□ -0.31
SNP1Q00916 DEP1YAL013W 1218 nt13.04□□□□□ -0.32
SNP1Q00916 URN1YPR152C 1398 nt13.02□□□□□ -0.33
SNP1Q00916 RPN10YHR200W 807 nt12.94□□□□□ -0.34
SNP1Q00916 YNL208WYNL208W 600 nt12.89□□□□□ -0.35
SNP1Q00916 OPI9YLR338W 858 nt12.8□□□□□ -0.36
SNP1Q00916 YKL097CYKL097C 411 nt12.71□□□□□ -0.37
SNP1Q00916 TIR1YER011W 765 nt12.69□□□□□ -0.38
SNP1Q00916 PUT4YOR348C 1884 nt12.68□□□□□ -0.38
SNP1Q00916 SAH1YER043C 1350 nt12.66□□□□□ -0.38
SNP1Q00916 SHU1YHL006C 453 nt12.52□□□□□ -0.41
SNP1Q00916 ARE1YCR048W 1833 nt12.5□□□□□ -0.41
SNP1Q00916 PUN1YLR414C 792 nt12.47□□□□□ -0.41
SNP1Q00916 SSA1YAL005C 1929 nt12.45□□□□□ -0.42
SNP1Q00916 YJR018WYJR018W 363 nt12.44□□□□□ -0.42
SNP1Q00916 YHR049C-AYHR049C-A 297 nt12.4□□□□□ -0.42
SNP1Q00916 POA1YBR022W 534 nt12.34□□□□□ -0.43
SNP1Q00916 RPP2BYDR382W 333 nt12.3□□□□□ -0.44
SNP1Q00916 YAL037C-BYAL037C-B 975 nt12.28□□□□□ -0.44
SNP1Q00916 PTC2YER089C 1395 nt12.27□□□□□ -0.45
SNP1Q00916 SRB2YHR041C 633 nt12.19□□□□□ -0.46
SNP1Q00916 YGR021WYGR021W 873 nt12.17□□□□□ -0.46
SNP1Q00916 YJR120WYJR120W 351 nt12.17□□□□□ -0.46
SNP1Q00916 BUD23YCR047C 828 nt12.16□□□□□ -0.46
SNP1Q00916 WWM1YFL010C 636 nt12.13□□□□□ -0.47
SNP1Q00916 YOR139CYOR139C 393 nt12.09□□□□□ -0.47
SNP1Q00916 NAB2YGL122C 1578 nt12.09□□□□□ -0.47
SNP1Q00916 NPL3YDR432W 1245 nt12.07□□□□□ -0.48
SNP1Q00916 HOM6YJR139C 1080 nt12.06□□□□□ -0.48
SNP1Q00916 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
SNP1Q00916 INM2YDR287W 879 nt12.01□□□□□ -0.49
SNP1Q00916 MNP1YGL068W 585 nt12.01□□□□□ -0.49
SNP1Q00916 BDH2YAL061W 1254 nt12□□□□□ -0.49
SNP1Q00916 YFL021C-AYFL021C-A 855 nt11.97□□□□□ -0.49
SNP1Q00916 FPR4YLR449W 1179 nt11.97□□□□□ -0.49
SNP1Q00916 DAL1YIR027C 1383 nt11.96□□□□□ -0.49
SNP1Q00916 YOL037CYOL037C 354 nt11.94□□□□□ -0.5
SNP1Q00916 RKM5YLR137W 1104 nt11.9□□□□□ -0.5
SNP1Q00916 YBL100CYBL100C 315 nt11.9□□□□□ -0.5
SNP1Q00916 LSM3YLR438C-A 270 nt11.89□□□□□ -0.51
SNP1Q00916 FIS1YIL065C 468 nt11.88□□□□□ -0.51
SNP1Q00916 PHO4YFR034C 939 nt11.83□□□□□ -0.52
SNP1Q00916 SSA3YBL075C 1950 nt11.79□□□□□ -0.52
SNP1Q00916 TRM9YML014W 840 nt11.79□□□□□ -0.52
SNP1Q00916 FUN26YAL022C 1554 nt11.75□□□□□ -0.53
SNP1Q00916 tM(CAU)CtM(CAU)C 72 nt11.63□□□□□ -0.55
SNP1Q00916 IMT4tM(CAU)E 72 nt11.63□□□□□ -0.55
SNP1Q00916 IMT3tM(CAU)J3 72 nt11.63□□□□□ -0.55
SNP1Q00916 IMT1tM(CAU)O1 72 nt11.63□□□□□ -0.55
SNP1Q00916 IMT2tM(CAU)P 72 nt11.63□□□□□ -0.55
SNP1Q00916 ALF1YNL148C 765 nt11.62□□□□□ -0.55
SNP1Q00916 CCT6YDR188W 1641 nt11.61□□□□□ -0.55
SNP1Q00916 YLR281CYLR281C 468 nt11.59□□□□□ -0.55
SNP1Q00916 SUF2tP(AGG)C 72 nt11.58□□□□□ -0.56
SNP1Q00916 SUF10tP(AGG)N 72 nt11.58□□□□□ -0.56
SNP1Q00916 WHI5YOR083W 888 nt11.55□□□□□ -0.56
SNP1Q00916 PUS2YGL063W 1113 nt11.54□□□□□ -0.56
SNP1Q00916 YPS1YLR120C 1710 nt11.52□□□□□ -0.56
SNP1Q00916 YDR095CYDR095C 411 nt11.49□□□□□ -0.57
SNP1Q00916 YHR165W-AYHR165W-A 312 nt11.45□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms