Protein–RNA interactions for Protein: P25441

RPC53, DNA-directed RNA polymerase III subunit RPC4, yeastyeast

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPC53P25441 YML009W-BYML009W-B 477 nt22.52■■□□□ 1.2
RPC53P25441 NSR1YGR159C 1245 nt22.28■■□□□ 1.16
RPC53P25441 NOP1YDL014W 984 nt21.96■■□□□ 1.11
RPC53P25441 YKL036CYKL036C 393 nt20.31■□□□□ 0.84
RPC53P25441 MDJ1YFL016C 1536 nt19.86■□□□□ 0.77
RPC53P25441 Q0297Q0297 156 nt19.21■□□□□ 0.67
RPC53P25441 SRX1YKL086W 384 nt19.15■□□□□ 0.66
RPC53P25441 YJL027CYJL027C 417 nt18.98■□□□□ 0.63
RPC53P25441 SCS3YGL126W 1143 nt18.52■□□□□ 0.56
RPC53P25441 YCR051WYCR051W 669 nt18.18■□□□□ 0.5
RPC53P25441 YOL085CYOL085C 342 nt17.56■□□□□ 0.4
RPC53P25441 DBP2YNL112W 1641 nt17.5■□□□□ 0.39
RPC53P25441 TRN1tP(UGG)A 72 nt17.26■□□□□ 0.35
RPC53P25441 SUF9tP(UGG)F 72 nt17.26■□□□□ 0.35
RPC53P25441 SUF8tP(UGG)H 72 nt17.26■□□□□ 0.35
RPC53P25441 tP(UGG)LtP(UGG)L 72 nt17.26■□□□□ 0.35
RPC53P25441 SUF7tP(UGG)M 72 nt17.26■□□□□ 0.35
RPC53P25441 tP(UGG)N1tP(UGG)N1 72 nt17.26■□□□□ 0.35
RPC53P25441 tP(UGG)N2tP(UGG)N2 72 nt17.26■□□□□ 0.35
RPC53P25441 tP(UGG)O1tP(UGG)O1 72 nt17.26■□□□□ 0.35
RPC53P25441 SUF11tP(UGG)O2 72 nt17.26■□□□□ 0.35
RPC53P25441 PKP1YIL042C 1185 nt17.26■□□□□ 0.35
RPC53P25441 RPP1BYDL130W 321 nt17.24■□□□□ 0.35
RPC53P25441 CCC1YLR220W 969 nt17.07■□□□□ 0.32
RPC53P25441 YBR190WYBR190W 312 nt16.98■□□□□ 0.31
RPC53P25441 RTC3YHR087W 336 nt16.61■□□□□ 0.25
RPC53P25441 ATS1YAL020C 1002 nt16.57■□□□□ 0.24
RPC53P25441 SCJ1YMR214W 1134 nt16.54■□□□□ 0.24
RPC53P25441 RVS167YDR388W 1449 nt16.51■□□□□ 0.23
RPC53P25441 PET122YER153C 765 nt16.45■□□□□ 0.22
RPC53P25441 tP(UGG)O3tP(UGG)O3 72 nt16.35■□□□□ 0.21
RPC53P25441 SCR1SCR1 522 nt16.35■□□□□ 0.21
RPC53P25441 RRN5YLR141W 1092 nt15.95■□□□□ 0.14
RPC53P25441 SHR5YOL110W 714 nt15.92■□□□□ 0.14
RPC53P25441 YDJ1YNL064C 1230 nt15.83■□□□□ 0.12
RPC53P25441 RSB1YOR049C 1065 nt15.7■□□□□ 0.1
RPC53P25441 YER088W-BYER088W-B 147 nt15.66■□□□□ 0.1
RPC53P25441 PUT4YOR348C 1884 nt15.53■□□□□ 0.08
RPC53P25441 URN1YPR152C 1398 nt15.48■□□□□ 0.07
RPC53P25441 GAR1YHR089C 618 nt15.44■□□□□ 0.06
RPC53P25441 DEP1YAL013W 1218 nt15.43■□□□□ 0.06
RPC53P25441 PST2YDR032C 597 nt15.31■□□□□ 0.04
RPC53P25441 OPI9YLR338W 858 nt15.29■□□□□ 0.04
RPC53P25441 RPN10YHR200W 807 nt15.26■□□□□ 0.03
RPC53P25441 SAH1YER043C 1350 nt15.24■□□□□ 0.03
RPC53P25441 YNL208WYNL208W 600 nt15.21■□□□□ 0.03
RPC53P25441 ARE1YCR048W 1833 nt15.2■□□□□ 0.02
RPC53P25441 POA1YBR022W 534 nt15.04■□□□□ -0
RPC53P25441 YHR049C-AYHR049C-A 297 nt15.02■□□□□ -0
RPC53P25441 TIR1YER011W 765 nt14.93□□□□□ -0.02
RPC53P25441 PUN1YLR414C 792 nt14.85□□□□□ -0.03
RPC53P25441 SSA3YBL075C 1950 nt14.83□□□□□ -0.04
RPC53P25441 YKL097CYKL097C 411 nt14.8□□□□□ -0.04
RPC53P25441 YJR018WYJR018W 363 nt14.76□□□□□ -0.05
RPC53P25441 BSC6YOL137W 1494 nt14.74□□□□□ -0.05
RPC53P25441 SSA1YAL005C 1929 nt14.7□□□□□ -0.06
RPC53P25441 PTC2YER089C 1395 nt14.69□□□□□ -0.06
RPC53P25441 BUD23YCR047C 828 nt14.67□□□□□ -0.06
RPC53P25441 SHU1YHL006C 453 nt14.67□□□□□ -0.06
RPC53P25441 NAB2YGL122C 1578 nt14.52□□□□□ -0.08
RPC53P25441 RPP2BYDR382W 333 nt14.48□□□□□ -0.09
RPC53P25441 YJR120WYJR120W 351 nt14.48□□□□□ -0.09
RPC53P25441 SRB2YHR041C 633 nt14.43□□□□□ -0.1
RPC53P25441 YAL037C-BYAL037C-B 975 nt14.39□□□□□ -0.11
RPC53P25441 DAL1YIR027C 1383 nt14.31□□□□□ -0.12
RPC53P25441 YGR021WYGR021W 873 nt14.29□□□□□ -0.12
RPC53P25441 FIS1YIL065C 468 nt14.29□□□□□ -0.12
RPC53P25441 FPR4YLR449W 1179 nt14.28□□□□□ -0.12
RPC53P25441 INM2YDR287W 879 nt14.26□□□□□ -0.13
RPC53P25441 WWM1YFL010C 636 nt14.26□□□□□ -0.13
RPC53P25441 HOM6YJR139C 1080 nt14.19□□□□□ -0.14
RPC53P25441 BDH2YAL061W 1254 nt14.17□□□□□ -0.14
RPC53P25441 PHO4YFR034C 939 nt14.16□□□□□ -0.14
RPC53P25441 YOR139CYOR139C 393 nt14.14□□□□□ -0.15
RPC53P25441 SPT5YML010W 3192 nt14.14□□□□□ -0.15
RPC53P25441 MNP1YGL068W 585 nt14.13□□□□□ -0.15
RPC53P25441 YBL100CYBL100C 315 nt14.1□□□□□ -0.15
RPC53P25441 YFL021C-AYFL021C-A 855 nt14.09□□□□□ -0.15
RPC53P25441 NPL3YDR432W 1245 nt14.07□□□□□ -0.16
RPC53P25441 LSM3YLR438C-A 270 nt14□□□□□ -0.17
RPC53P25441 RKM5YLR137W 1104 nt13.99□□□□□ -0.17
RPC53P25441 YOL037CYOL037C 354 nt13.99□□□□□ -0.17
RPC53P25441 YPS1YLR120C 1710 nt13.94□□□□□ -0.18
RPC53P25441 FUN26YAL022C 1554 nt13.92□□□□□ -0.18
RPC53P25441 TRM9YML014W 840 nt13.88□□□□□ -0.19
RPC53P25441 MEP2YNL142W 1500 nt13.85□□□□□ -0.19
RPC53P25441 YDR095CYDR095C 411 nt13.83□□□□□ -0.2
RPC53P25441 YHR165W-AYHR165W-A 312 nt13.81□□□□□ -0.2
RPC53P25441 ALF1YNL148C 765 nt13.77□□□□□ -0.21
RPC53P25441 CCT6YDR188W 1641 nt13.75□□□□□ -0.21
RPC53P25441 SSA4YER103W 1929 nt13.7□□□□□ -0.22
RPC53P25441 SUF2tP(AGG)C 72 nt13.65□□□□□ -0.22
RPC53P25441 SUF10tP(AGG)N 72 nt13.65□□□□□ -0.22
RPC53P25441 DCW1YKL046C 1350 nt13.63□□□□□ -0.23
RPC53P25441 YLR281CYLR281C 468 nt13.59□□□□□ -0.23
RPC53P25441 tM(CAU)CtM(CAU)C 72 nt13.58□□□□□ -0.24
RPC53P25441 IMT4tM(CAU)E 72 nt13.58□□□□□ -0.24
RPC53P25441 IMT3tM(CAU)J3 72 nt13.58□□□□□ -0.24
RPC53P25441 IMT1tM(CAU)O1 72 nt13.58□□□□□ -0.24
RPC53P25441 IMT2tM(CAU)P 72 nt13.58□□□□□ -0.24
Retrieved 100 of 7,029 protein–RNA pairs in 42.2 ms