RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PHM7Q12252 991 aa6.03□□□□□ -1.44
PDB1YBR221C PAR32Q12515 295 aaKnown RBP6.03□□□□□ -1.44
PDB1YBR221C CDC9P04819 755 aa6.02□□□□□ -1.45
PDB1YBR221C KEX2P13134 814 aa6.02□□□□□ -1.45
PDB1YBR221C PFK2P16862 959 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
PDB1YBR221C COX11P19516 300 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C PUP2P32379 260 aa6.02□□□□□ -1.45
PDB1YBR221C DAL3P32459 195 aa6.02□□□□□ -1.45
PDB1YBR221C FBP26P32604 452 aa6.02□□□□□ -1.45
PDB1YBR221C DOM34P33309 386 aa6.02□□□□□ -1.45
PDB1YBR221C MCD4P36051 919 aa6.02□□□□□ -1.45
PDB1YBR221C RDH54P38086 958 aa6.02□□□□□ -1.45
PDB1YBR221C YBL028CP38202 106 aa6.02□□□□□ -1.45
PDB1YBR221C APM2P38700 605 aa6.02□□□□□ -1.45
PDB1YBR221C RAD55P38953 406 aa6.02□□□□□ -1.45
PDB1YBR221C SMC2P38989 1170 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C XDJ1P39102 459 aa6.02□□□□□ -1.45
PDB1YBR221C YAP5P40574 245 aa6.02□□□□□ -1.45
PDB1YBR221C ZIM17P42844 174 aa6.02□□□□□ -1.45
PDB1YBR221C RMD8P43620 662 aa6.02□□□□□ -1.45
PDB1YBR221C GYP7P48365 746 aa6.02□□□□□ -1.45
PDB1YBR221C PSP2P50109 593 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C HAS1Q03532 505 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C YMR155WQ03795 547 aa6.02□□□□□ -1.45
PDB1YBR221C COG8Q04632 607 aa6.02□□□□□ -1.45
PDB1YBR221C SMD2Q06217 110 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C PHO92Q06390 306 aa6.02□□□□□ -1.45
PDB1YBR221C PIB1Q06651 286 aa6.02□□□□□ -1.45
PDB1YBR221C HIM1Q06674 414 aa6.02□□□□□ -1.45
PDB1YBR221C DIB1Q06819 143 aaPredicted RBP6.02□□□□□ -1.45
PDB1YBR221C BMS1Q08965 1183 aaKnown RBP6.02□□□□□ -1.45
PDB1YBR221C GRX6Q12438 231 aa6.02□□□□□ -1.45
PDB1YBR221C AUS1Q08409 1394 aa6.02□□□□□ -1.45
PDB1YBR221C SWI5P08153 709 aa6.01□□□□□ -1.45
PDB1YBR221C TOP3P13099 656 aa6.01□□□□□ -1.45
PDB1YBR221C CKA1P15790 372 aa6.01□□□□□ -1.45
PDB1YBR221C CBP3P21560 335 aa6.01□□□□□ -1.45
PDB1YBR221C LCB1P25045 558 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C SPB1P25582 841 aaPredicted RBP6.01□□□□□ -1.45
PDB1YBR221C EFB1P32471 206 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C CBF2P32504 956 aa6.01□□□□□ -1.45
PDB1YBR221C SMI1P32566 505 aa6.01□□□□□ -1.45
PDB1YBR221C RPT3P33298 428 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C SER1P33330 395 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C PIN4P34217 668 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
PDB1YBR221C COY1P34237 679 aa6.01□□□□□ -1.45
PDB1YBR221C DID4P36108 232 aa6.01□□□□□ -1.45
PDB1YBR221C CCZ1P38273 704 aa6.01□□□□□ -1.45
PDB1YBR221C RGA1P39083 1007 aa6.01□□□□□ -1.45
PDB1YBR221C UBP7P40453 1071 aa6.01□□□□□ -1.45
PDB1YBR221C MKT1P40850 830 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C SMK1P41808 388 aa6.01□□□□□ -1.45
PDB1YBR221C SKP2P42843 763 aa6.01□□□□□ -1.45
PDB1YBR221C UBP6P43593 499 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C NUT1P53114 1132 aa6.01□□□□□ -1.45
PDB1YBR221C NNF2P53253 936 aa6.01□□□□□ -1.45
PDB1YBR221C YGR250CP53316 781 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C YPL071CQ02864 156 aa6.01□□□□□ -1.45
PDB1YBR221C RMT2Q03305 412 aa6.01□□□□□ -1.45
PDB1YBR221C YLL054CQ12244 843 aa6.01□□□□□ -1.45
PDB1YBR221C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
PDB1YBR221C PGA3Q12746 312 aaKnown RBP6.01□□□□□ -1.45
PDB1YBR221C BI4P03879 638 aa6□□□□□ -1.45
PDB1YBR221C GCD1P09032 578 aaPredicted RBP6□□□□□ -1.45
PDB1YBR221C HSP104P31539 908 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C NIP1P32497 812 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C HBS1P32769 611 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C MRE11P32829 692 aa6□□□□□ -1.45
PDB1YBR221C RER2P35196 286 aa6□□□□□ -1.45
PDB1YBR221C ECM2P38241 364 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C PPE1P38796 400 aa6□□□□□ -1.45
PDB1YBR221C NTA1P40354 457 aa6□□□□□ -1.45
PDB1YBR221C YIL161WP40449 235 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C DPH1P40487 425 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C IMA5P40884 581 aa6□□□□□ -1.45
PDB1YBR221C FET4P40988 552 aa6□□□□□ -1.45
PDB1YBR221C ARF3P40994 183 aaRIP-Chip data6□□□□□ -1.45not detected
PDB1YBR221C VNX1P42839 908 aa6□□□□□ -1.45
PDB1YBR221C AIP1P46680 615 aaKnown RBP6□□□□□ -1.45
PDB1YBR221C CCM1P48237 864 aaPredicted RBP6□□□□□ -1.45
PDB1YBR221C DSD1P53095 428 aa6□□□□□ -1.45
PDB1YBR221C HOP2P53187 214 aa6□□□□□ -1.45
PDB1YBR221C TEP1P53916 434 aa6□□□□□ -1.45
PDB1YBR221C SNZ1Q03148 297 aa6□□□□□ -1.45
PDB1YBR221C SKY1Q03656 742 aa6□□□□□ -1.45
PDB1YBR221C MCP2Q06567 569 aa6□□□□□ -1.45
PDB1YBR221C CDC16P09798 840 aa5.99□□□□□ -1.45
PDB1YBR221C STE6P12866 1290 aa5.99□□□□□ -1.45
PDB1YBR221C CAF20P12962 161 aaKnown RBP5.99□□□□□ -1.45
PDB1YBR221C POL3P15436 1097 aa5.99□□□□□ -1.45
PDB1YBR221C ERG3P32353 365 aa5.99□□□□□ -1.45
PDB1YBR221C VPS17P32913 551 aa5.99□□□□□ -1.45
PDB1YBR221C IRS4P36115 615 aaKnown RBP5.99□□□□□ -1.45
PDB1YBR221C SHM2P37291 469 aaKnown RBP5.99□□□□□ -1.45
PDB1YBR221C VTC4P47075 721 aa5.99□□□□□ -1.45
PDB1YBR221C NCS6P53088 359 aa5.99□□□□□ -1.45
PDB1YBR221C SPP1Q03012 353 aa5.99□□□□□ -1.45
PDB1YBR221C YDR131CQ03899 556 aa5.99□□□□□ -1.45
PDB1YBR221C MFB1Q04922 465 aa5.99□□□□□ -1.45
PDB1YBR221C ERF2Q06551 359 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms