Protein–RNA interactions for Protein: P37291

SHM2, Serine hydroxymethyltransferase, cytosolic, yeastyeast

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM2P37291 YML009W-BYML009W-B 477 nt17.42■□□□□ 0.38
SHM2P37291 NSR1YGR159C 1245 nt17.23■□□□□ 0.35
SHM2P37291 NOP1YDL014W 984 nt16.97■□□□□ 0.31
SHM2P37291 YKL036CYKL036C 393 nt15.72■□□□□ 0.11
SHM2P37291 MDJ1YFL016C 1536 nt15.22■□□□□ 0.03
SHM2P37291 Q0297Q0297 156 nt14.87□□□□□ -0.03
SHM2P37291 SRX1YKL086W 384 nt14.82□□□□□ -0.04
SHM2P37291 YJL027CYJL027C 417 nt14.69□□□□□ -0.06
SHM2P37291 SCS3YGL126W 1143 nt14.34□□□□□ -0.11
SHM2P37291 YCR051WYCR051W 669 nt14.07□□□□□ -0.16
SHM2P37291 SSA3YBL075C 1950 nt13.71□□□□□ -0.21
SHM2P37291 YOL085CYOL085C 342 nt13.6□□□□□ -0.23
SHM2P37291 DBP2YNL112W 1641 nt13.5□□□□□ -0.25
SHM2P37291 PKP1YIL042C 1185 nt13.39□□□□□ -0.27
SHM2P37291 RPP1BYDL130W 321 nt13.35□□□□□ -0.27
SHM2P37291 TRN1tP(UGG)A 72 nt13.35□□□□□ -0.27
SHM2P37291 SUF9tP(UGG)F 72 nt13.35□□□□□ -0.27
SHM2P37291 SUF8tP(UGG)H 72 nt13.35□□□□□ -0.27
SHM2P37291 tP(UGG)LtP(UGG)L 72 nt13.35□□□□□ -0.27
SHM2P37291 SUF7tP(UGG)M 72 nt13.35□□□□□ -0.27
SHM2P37291 tP(UGG)N1tP(UGG)N1 72 nt13.35□□□□□ -0.27
SHM2P37291 tP(UGG)N2tP(UGG)N2 72 nt13.35□□□□□ -0.27
SHM2P37291 tP(UGG)O1tP(UGG)O1 72 nt13.35□□□□□ -0.27
SHM2P37291 SUF11tP(UGG)O2 72 nt13.35□□□□□ -0.27
SHM2P37291 Q0182Q0182 405 nt13.32□□□□□ -0.28
SHM2P37291 CCC1YLR220W 969 nt13.21□□□□□ -0.29
SHM2P37291 YBR190WYBR190W 312 nt12.97□□□□□ -0.33
SHM2P37291 ATS1YAL020C 1002 nt12.85□□□□□ -0.35
SHM2P37291 SCJ1YMR214W 1134 nt12.81□□□□□ -0.36
SHM2P37291 MOT3YMR070W 1473 nt12.79□□□□□ -0.36
SHM2P37291 PET122YER153C 765 nt12.74□□□□□ -0.37
SHM2P37291 RVS167YDR388W 1449 nt12.73□□□□□ -0.37
SHM2P37291 RTC3YHR087W 336 nt12.69□□□□□ -0.38
SHM2P37291 tP(UGG)O3tP(UGG)O3 72 nt12.66□□□□□ -0.38
SHM2P37291 SCR1SCR1 522 nt12.64□□□□□ -0.39
SHM2P37291 RRN5YLR141W 1092 nt12.37□□□□□ -0.43
SHM2P37291 SHR5YOL110W 714 nt12.31□□□□□ -0.44
SHM2P37291 PUT4YOR348C 1884 nt12.29□□□□□ -0.44
SHM2P37291 YDJ1YNL064C 1230 nt12.25□□□□□ -0.45
SHM2P37291 RSB1YOR049C 1065 nt12.15□□□□□ -0.46
SHM2P37291 YER088W-BYER088W-B 147 nt12.13□□□□□ -0.47
SHM2P37291 GAR1YHR089C 618 nt11.95□□□□□ -0.5
SHM2P37291 SSA4YER103W 1929 nt11.92□□□□□ -0.5
SHM2P37291 DEP1YAL013W 1218 nt11.92□□□□□ -0.5
SHM2P37291 URN1YPR152C 1398 nt11.91□□□□□ -0.5
SHM2P37291 PST2YDR032C 597 nt11.88□□□□□ -0.51
SHM2P37291 SPT5YML010W 3192 nt11.87□□□□□ -0.51
SHM2P37291 POA1YBR022W 534 nt11.84□□□□□ -0.51
SHM2P37291 ARE1YCR048W 1833 nt11.79□□□□□ -0.52
SHM2P37291 RPN10YHR200W 807 nt11.77□□□□□ -0.53
SHM2P37291 BSC6YOL137W 1494 nt11.76□□□□□ -0.53
SHM2P37291 YNL208WYNL208W 600 nt11.75□□□□□ -0.53
SHM2P37291 OPI9YLR338W 858 nt11.71□□□□□ -0.53
SHM2P37291 YHR049C-AYHR049C-A 297 nt11.65□□□□□ -0.54
SHM2P37291 SAH1YER043C 1350 nt11.61□□□□□ -0.55
SHM2P37291 TIR1YER011W 765 nt11.55□□□□□ -0.56
SHM2P37291 BDF1YLR399C 2061 nt11.55□□□□□ -0.56
SHM2P37291 PAC11YDR488C 1602 nt11.49□□□□□ -0.57
SHM2P37291 YKL097CYKL097C 411 nt11.47□□□□□ -0.57
SHM2P37291 PUN1YLR414C 792 nt11.39□□□□□ -0.59
SHM2P37291 SSA1YAL005C 1929 nt11.39□□□□□ -0.59
SHM2P37291 SHU1YHL006C 453 nt11.38□□□□□ -0.59
SHM2P37291 TAT1YBR069C 1860 nt11.38□□□□□ -0.59
SHM2P37291 YJR018WYJR018W 363 nt11.36□□□□□ -0.59
SHM2P37291 BUD23YCR047C 828 nt11.31□□□□□ -0.6
SHM2P37291 PTC2YER089C 1395 nt11.22□□□□□ -0.61
SHM2P37291 NVJ2YPR091C 2313 nt11.21□□□□□ -0.61
SHM2P37291 SRB2YHR041C 633 nt11.2□□□□□ -0.62
SHM2P37291 YJR120WYJR120W 351 nt11.19□□□□□ -0.62
SHM2P37291 YAL037C-BYAL037C-B 975 nt11.18□□□□□ -0.62
SHM2P37291 RPP2BYDR382W 333 nt11.17□□□□□ -0.62
SHM2P37291 MEP2YNL142W 1500 nt11.13□□□□□ -0.63
SHM2P37291 NAB2YGL122C 1578 nt11.07□□□□□ -0.64
SHM2P37291 WWM1YFL010C 636 nt11.05□□□□□ -0.64
SHM2P37291 YGR021WYGR021W 873 nt11.04□□□□□ -0.64
SHM2P37291 HOM6YJR139C 1080 nt10.99□□□□□ -0.65
SHM2P37291 YOR139CYOR139C 393 nt10.98□□□□□ -0.65
SHM2P37291 INM2YDR287W 879 nt10.95□□□□□ -0.66
SHM2P37291 MNP1YGL068W 585 nt10.95□□□□□ -0.66
SHM2P37291 BDH2YAL061W 1254 nt10.95□□□□□ -0.66
SHM2P37291 DAL1YIR027C 1383 nt10.94□□□□□ -0.66
SHM2P37291 DCW1YKL046C 1350 nt10.93□□□□□ -0.66
SHM2P37291 FIS1YIL065C 468 nt10.92□□□□□ -0.66
SHM2P37291 FPR4YLR449W 1179 nt10.92□□□□□ -0.66
SHM2P37291 NPL3YDR432W 1245 nt10.89□□□□□ -0.67
SHM2P37291 YFL021C-AYFL021C-A 855 nt10.89□□□□□ -0.67
SHM2P37291 YBL100CYBL100C 315 nt10.87□□□□□ -0.67
SHM2P37291 YBR220CYBR220C 1683 nt10.87□□□□□ -0.67
SHM2P37291 PHO4YFR034C 939 nt10.84□□□□□ -0.67
SHM2P37291 RKM5YLR137W 1104 nt10.83□□□□□ -0.68
SHM2P37291 LSM3YLR438C-A 270 nt10.82□□□□□ -0.68
SHM2P37291 YOL037CYOL037C 354 nt10.81□□□□□ -0.68
SHM2P37291 YMR090WYMR090W 684 nt10.78□□□□□ -0.68
SHM2P37291 EMI2YDR516C 1503 nt10.76□□□□□ -0.69
SHM2P37291 FUN26YAL022C 1554 nt10.73□□□□□ -0.69
SHM2P37291 TRM9YML014W 840 nt10.72□□□□□ -0.69
SHM2P37291 PCH2YBR186W 1695 nt10.72□□□□□ -0.69
SHM2P37291 YPS1YLR120C 1710 nt10.71□□□□□ -0.69
SHM2P37291 GUT2YIL155C 1950 nt10.69□□□□□ -0.7
SHM2P37291 FPS1YLL043W 2010 nt10.68□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms