Protein–RNA interactions for Protein: P40994

ARF3, ADP-ribosylation factor 3, yeastyeast

RIP-Chip data

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ARF3P40994 NSR1YGR159C 1245 nt19.25■□□□□ 0.67
ARF3P40994 YML009W-BYML009W-B 477 nt19.03■□□□□ 0.64
ARF3P40994 NOP1YDL014W 984 nt18.37■□□□□ 0.53
ARF3P40994 MDJ1YFL016C 1536 nt17.38■□□□□ 0.37 RIP-Chip
ARF3P40994 YKL036CYKL036C 393 nt16.69■□□□□ 0.26
ARF3P40994 SRX1YKL086W 384 nt16.11■□□□□ 0.17
ARF3P40994 Q0297Q0297 156 nt16.06■□□□□ 0.16
ARF3P40994 YJL027CYJL027C 417 nt15.97■□□□□ 0.15
ARF3P40994 DBP2YNL112W 1641 nt15.34■□□□□ 0.05
ARF3P40994 YCR051WYCR051W 669 nt15.2■□□□□ 0.02
ARF3P40994 SCS3YGL126W 1143 nt15.06■□□□□ 0
ARF3P40994 YBR190WYBR190W 312 nt14.9□□□□□ -0.02
ARF3P40994 TRN1tP(UGG)A 72 nt14.77□□□□□ -0.05
ARF3P40994 SUF9tP(UGG)F 72 nt14.77□□□□□ -0.05
ARF3P40994 SUF8tP(UGG)H 72 nt14.77□□□□□ -0.05
ARF3P40994 tP(UGG)LtP(UGG)L 72 nt14.77□□□□□ -0.05
ARF3P40994 SUF7tP(UGG)M 72 nt14.77□□□□□ -0.05
ARF3P40994 tP(UGG)N1tP(UGG)N1 72 nt14.77□□□□□ -0.05
ARF3P40994 tP(UGG)N2tP(UGG)N2 72 nt14.77□□□□□ -0.05
ARF3P40994 tP(UGG)O1tP(UGG)O1 72 nt14.77□□□□□ -0.05
ARF3P40994 SUF11tP(UGG)O2 72 nt14.77□□□□□ -0.05
ARF3P40994 CCC1YLR220W 969 nt14.55□□□□□ -0.08
ARF3P40994 YOL085CYOL085C 342 nt14.52□□□□□ -0.09
ARF3P40994 RTC3YHR087W 336 nt14.48□□□□□ -0.09
ARF3P40994 RPP1BYDL130W 321 nt14.39□□□□□ -0.11
ARF3P40994 PKP1YIL042C 1185 nt14.3□□□□□ -0.12
ARF3P40994 RVS167YDR388W 1449 nt14.18□□□□□ -0.14 RIP-Chip
ARF3P40994 SCJ1YMR214W 1134 nt14.18□□□□□ -0.14
ARF3P40994 tP(UGG)O3tP(UGG)O3 72 nt13.86□□□□□ -0.19
ARF3P40994 PUT4YOR348C 1884 nt13.84□□□□□ -0.19 RIP-Chip
ARF3P40994 PET122YER153C 765 nt13.8□□□□□ -0.2
ARF3P40994 SHR5YOL110W 714 nt13.69□□□□□ -0.22
ARF3P40994 SSA3YBL075C 1950 nt13.69□□□□□ -0.22 RIP-Chip
ARF3P40994 URN1YPR152C 1398 nt13.49□□□□□ -0.25
ARF3P40994 ARE1YCR048W 1833 nt13.48□□□□□ -0.25
ARF3P40994 SCR1SCR1 522 nt13.48□□□□□ -0.25
ARF3P40994 YDJ1YNL064C 1230 nt13.42□□□□□ -0.26
ARF3P40994 ATS1YAL020C 1002 nt13.4□□□□□ -0.26
ARF3P40994 DEP1YAL013W 1218 nt13.39□□□□□ -0.27
ARF3P40994 OPI9YLR338W 858 nt13.39□□□□□ -0.27
ARF3P40994 SAH1YER043C 1350 nt13.39□□□□□ -0.27
ARF3P40994 RRN5YLR141W 1092 nt13.37□□□□□ -0.27
ARF3P40994 POA1YBR022W 534 nt13.33□□□□□ -0.28
ARF3P40994 YHR049C-AYHR049C-A 297 nt13.24□□□□□ -0.29
ARF3P40994 RPN10YHR200W 807 nt13.15□□□□□ -0.3
ARF3P40994 YNL208WYNL208W 600 nt13.14□□□□□ -0.31
ARF3P40994 GAR1YHR089C 618 nt13.12□□□□□ -0.31
ARF3P40994 YER088W-BYER088W-B 147 nt13.11□□□□□ -0.31
ARF3P40994 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
ARF3P40994 Q0182Q0182 405 nt13.06□□□□□ -0.32
ARF3P40994 PUN1YLR414C 792 nt12.95□□□□□ -0.34
ARF3P40994 RSB1YOR049C 1065 nt12.93□□□□□ -0.34 RIP-Chip
ARF3P40994 SPT5YML010W 3192 nt12.89□□□□□ -0.35 RIP-Chip
ARF3P40994 PTC2YER089C 1395 nt12.87□□□□□ -0.35
ARF3P40994 BUD23YCR047C 828 nt12.86□□□□□ -0.35
ARF3P40994 YJR018WYJR018W 363 nt12.85□□□□□ -0.35
ARF3P40994 NAB2YGL122C 1578 nt12.74□□□□□ -0.37
ARF3P40994 TIR1YER011W 765 nt12.72□□□□□ -0.37
ARF3P40994 YJR120WYJR120W 351 nt12.71□□□□□ -0.37
ARF3P40994 SSA1YAL005C 1929 nt12.68□□□□□ -0.38
ARF3P40994 FIS1YIL065C 468 nt12.58□□□□□ -0.4
ARF3P40994 DAL1YIR027C 1383 nt12.51□□□□□ -0.41
ARF3P40994 PST2YDR032C 597 nt12.5□□□□□ -0.41
ARF3P40994 SRB2YHR041C 633 nt12.49□□□□□ -0.41
ARF3P40994 SSA4YER103W 1929 nt12.45□□□□□ -0.42
ARF3P40994 INM2YDR287W 879 nt12.43□□□□□ -0.42
ARF3P40994 RPP2BYDR382W 333 nt12.43□□□□□ -0.42
ARF3P40994 FPR4YLR449W 1179 nt12.41□□□□□ -0.42
ARF3P40994 PHO4YFR034C 939 nt12.4□□□□□ -0.42
ARF3P40994 MEP2YNL142W 1500 nt12.35□□□□□ -0.43 RIP-Chip
ARF3P40994 YPS1YLR120C 1710 nt12.31□□□□□ -0.44 RIP-Chip
ARF3P40994 MOT3YMR070W 1473 nt12.27□□□□□ -0.44 RIP-Chip
ARF3P40994 YBL100CYBL100C 315 nt12.25□□□□□ -0.45
ARF3P40994 BDH2YAL061W 1254 nt12.21□□□□□ -0.45
ARF3P40994 YDR095CYDR095C 411 nt12.18□□□□□ -0.46
ARF3P40994 DCW1YKL046C 1350 nt12.17□□□□□ -0.46
ARF3P40994 WWM1YFL010C 636 nt12.12□□□□□ -0.47
ARF3P40994 FUN26YAL022C 1554 nt12.12□□□□□ -0.47
ARF3P40994 YHR165W-AYHR165W-A 312 nt12.11□□□□□ -0.47
ARF3P40994 BDF1YLR399C 2061 nt12.07□□□□□ -0.48
ARF3P40994 SHU1YHL006C 453 nt12.05□□□□□ -0.48
ARF3P40994 PTP1YDL230W 1008 nt12.01□□□□□ -0.49
ARF3P40994 LSM3YLR438C-A 270 nt12□□□□□ -0.49
ARF3P40994 TRM9YML014W 840 nt12□□□□□ -0.49
ARF3P40994 EMI2YDR516C 1503 nt11.97□□□□□ -0.49
ARF3P40994 CCT6YDR188W 1641 nt11.95□□□□□ -0.5
ARF3P40994 CAC2YML102W 1407 nt11.94□□□□□ -0.5
ARF3P40994 YAL037C-BYAL037C-B 975 nt11.94□□□□□ -0.5
ARF3P40994 ALF1YNL148C 765 nt11.93□□□□□ -0.5
ARF3P40994 RPP2AYOL039W 321 nt11.93□□□□□ -0.5
ARF3P40994 HOM6YJR139C 1080 nt11.92□□□□□ -0.5
ARF3P40994 YFL021C-AYFL021C-A 855 nt11.91□□□□□ -0.5
ARF3P40994 YGR021WYGR021W 873 nt11.9□□□□□ -0.5
ARF3P40994 YBR220CYBR220C 1683 nt11.9□□□□□ -0.5
ARF3P40994 YKL097CYKL097C 411 nt11.89□□□□□ -0.51
ARF3P40994 SIS1YNL007C 1059 nt11.88□□□□□ -0.51 RIP-Chip
ARF3P40994 TAT1YBR069C 1860 nt11.88□□□□□ -0.51
ARF3P40994 YJL225CYJL225C 5277 nt11.88□□□□□ -0.51
ARF3P40994 YDL221WYDL221W 552 nt11.87□□□□□ -0.51
ARF3P40994 YMR090WYMR090W 684 nt11.82□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms