Protein–RNA interactions for Protein: P47075

VTC4, Vacuolar transporter chaperone 4, yeastyeast

Predictions only

Length 721 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTC4P47075 YML009W-BYML009W-B 477 nt21.37■■□□□ 1.01
VTC4P47075 NSR1YGR159C 1245 nt21.24■□□□□ 0.99
VTC4P47075 NOP1YDL014W 984 nt20.92■□□□□ 0.94
VTC4P47075 YKL036CYKL036C 393 nt19.39■□□□□ 0.69
VTC4P47075 MDJ1YFL016C 1536 nt18.61■□□□□ 0.57
VTC4P47075 Q0297Q0297 156 nt18.36■□□□□ 0.53
VTC4P47075 SRX1YKL086W 384 nt18.28■□□□□ 0.52
VTC4P47075 YJL027CYJL027C 417 nt18.09■□□□□ 0.49
VTC4P47075 SCS3YGL126W 1143 nt17.68■□□□□ 0.42
VTC4P47075 YCR051WYCR051W 669 nt17.27■□□□□ 0.36
VTC4P47075 YOL085CYOL085C 342 nt16.78■□□□□ 0.28
VTC4P47075 DBP2YNL112W 1641 nt16.58■□□□□ 0.24
VTC4P47075 RPP1BYDL130W 321 nt16.45■□□□□ 0.22
VTC4P47075 TRN1tP(UGG)A 72 nt16.44■□□□□ 0.22
VTC4P47075 SUF9tP(UGG)F 72 nt16.44■□□□□ 0.22
VTC4P47075 SUF8tP(UGG)H 72 nt16.44■□□□□ 0.22
VTC4P47075 tP(UGG)LtP(UGG)L 72 nt16.44■□□□□ 0.22
VTC4P47075 SUF7tP(UGG)M 72 nt16.44■□□□□ 0.22
VTC4P47075 tP(UGG)N1tP(UGG)N1 72 nt16.44■□□□□ 0.22
VTC4P47075 tP(UGG)N2tP(UGG)N2 72 nt16.44■□□□□ 0.22
VTC4P47075 tP(UGG)O1tP(UGG)O1 72 nt16.44■□□□□ 0.22
VTC4P47075 SUF11tP(UGG)O2 72 nt16.44■□□□□ 0.22
VTC4P47075 PKP1YIL042C 1185 nt16.42■□□□□ 0.22
VTC4P47075 CCC1YLR220W 969 nt16.17■□□□□ 0.18
VTC4P47075 SCJ1YMR214W 1134 nt15.94■□□□□ 0.14
VTC4P47075 YBR190WYBR190W 312 nt15.94■□□□□ 0.14
VTC4P47075 ATS1YAL020C 1002 nt15.86■□□□□ 0.13
VTC4P47075 PET122YER153C 765 nt15.65■□□□□ 0.1
VTC4P47075 RVS167YDR388W 1449 nt15.65■□□□□ 0.1
VTC4P47075 tP(UGG)O3tP(UGG)O3 72 nt15.58■□□□□ 0.08
VTC4P47075 SCR1SCR1 522 nt15.57■□□□□ 0.08
VTC4P47075 RTC3YHR087W 336 nt15.5■□□□□ 0.07
VTC4P47075 RRN5YLR141W 1092 nt15.22■□□□□ 0.03
VTC4P47075 SHR5YOL110W 714 nt15.14■□□□□ 0.01
VTC4P47075 YDJ1YNL064C 1230 nt15.12■□□□□ 0.01
VTC4P47075 YER088W-BYER088W-B 147 nt14.93□□□□□ -0.02
VTC4P47075 RSB1YOR049C 1065 nt14.93□□□□□ -0.02
VTC4P47075 PST2YDR032C 597 nt14.69□□□□□ -0.06
VTC4P47075 GAR1YHR089C 618 nt14.66□□□□□ -0.06
VTC4P47075 URN1YPR152C 1398 nt14.59□□□□□ -0.07
VTC4P47075 PUT4YOR348C 1884 nt14.55□□□□□ -0.08
VTC4P47075 DEP1YAL013W 1218 nt14.55□□□□□ -0.08
VTC4P47075 RPN10YHR200W 807 nt14.47□□□□□ -0.09
VTC4P47075 YNL208WYNL208W 600 nt14.45□□□□□ -0.1
VTC4P47075 OPI9YLR338W 858 nt14.4□□□□□ -0.1
VTC4P47075 ARE1YCR048W 1833 nt14.22□□□□□ -0.13
VTC4P47075 SAH1YER043C 1350 nt14.22□□□□□ -0.13
VTC4P47075 TIR1YER011W 765 nt14.21□□□□□ -0.13
VTC4P47075 YKL097CYKL097C 411 nt14.15□□□□□ -0.14
VTC4P47075 SSA3YBL075C 1950 nt14.07□□□□□ -0.16
VTC4P47075 POA1YBR022W 534 nt14.03□□□□□ -0.16
VTC4P47075 SHU1YHL006C 453 nt14.02□□□□□ -0.17
VTC4P47075 YHR049C-AYHR049C-A 297 nt13.99□□□□□ -0.17
VTC4P47075 PUN1YLR414C 792 nt13.99□□□□□ -0.17
VTC4P47075 SSA1YAL005C 1929 nt13.99□□□□□ -0.17
VTC4P47075 YJR018WYJR018W 363 nt13.95□□□□□ -0.18
VTC4P47075 BSC6YOL137W 1494 nt13.78□□□□□ -0.2
VTC4P47075 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
VTC4P47075 PTC2YER089C 1395 nt13.73□□□□□ -0.21
VTC4P47075 SRB2YHR041C 633 nt13.73□□□□□ -0.21
VTC4P47075 RPP2BYDR382W 333 nt13.72□□□□□ -0.21
VTC4P47075 YAL037C-BYAL037C-B 975 nt13.7□□□□□ -0.22
VTC4P47075 YGR021WYGR021W 873 nt13.61□□□□□ -0.23
VTC4P47075 BUD23YCR047C 828 nt13.6□□□□□ -0.23
VTC4P47075 NAB2YGL122C 1578 nt13.6□□□□□ -0.23
VTC4P47075 WWM1YFL010C 636 nt13.56□□□□□ -0.24
VTC4P47075 HOM6YJR139C 1080 nt13.54□□□□□ -0.24
VTC4P47075 YOR139CYOR139C 393 nt13.54□□□□□ -0.24
VTC4P47075 INM2YDR287W 879 nt13.48□□□□□ -0.25
VTC4P47075 BDH2YAL061W 1254 nt13.47□□□□□ -0.25
VTC4P47075 DAL1YIR027C 1383 nt13.44□□□□□ -0.26
VTC4P47075 SPT5YML010W 3192 nt13.42□□□□□ -0.26
VTC4P47075 YFL021C-AYFL021C-A 855 nt13.42□□□□□ -0.26
VTC4P47075 NPL3YDR432W 1245 nt13.41□□□□□ -0.26
VTC4P47075 MNP1YGL068W 585 nt13.41□□□□□ -0.26
VTC4P47075 FIS1YIL065C 468 nt13.38□□□□□ -0.27
VTC4P47075 LSM3YLR438C-A 270 nt13.36□□□□□ -0.27
VTC4P47075 YOL037CYOL037C 354 nt13.35□□□□□ -0.27
VTC4P47075 Q0182Q0182 405 nt13.33□□□□□ -0.28
VTC4P47075 RKM5YLR137W 1104 nt13.33□□□□□ -0.28
VTC4P47075 YBL100CYBL100C 315 nt13.32□□□□□ -0.28
VTC4P47075 FPR4YLR449W 1179 nt13.3□□□□□ -0.28
VTC4P47075 PHO4YFR034C 939 nt13.28□□□□□ -0.28
VTC4P47075 MOT3YMR070W 1473 nt13.23□□□□□ -0.29
VTC4P47075 TRM9YML014W 840 nt13.18□□□□□ -0.3
VTC4P47075 FUN26YAL022C 1554 nt13.17□□□□□ -0.3
VTC4P47075 YGR139WYGR139W 339 nt13.15□□□□□ -0.3
VTC4P47075 CCT6YDR188W 1641 nt13.08□□□□□ -0.32
VTC4P47075 tM(CAU)CtM(CAU)C 72 nt13.03□□□□□ -0.32
VTC4P47075 IMT4tM(CAU)E 72 nt13.03□□□□□ -0.32
VTC4P47075 IMT3tM(CAU)J3 72 nt13.03□□□□□ -0.32
VTC4P47075 IMT1tM(CAU)O1 72 nt13.03□□□□□ -0.32
VTC4P47075 IMT2tM(CAU)P 72 nt13.03□□□□□ -0.32
VTC4P47075 YPS1YLR120C 1710 nt13□□□□□ -0.33
VTC4P47075 YLR281CYLR281C 468 nt13□□□□□ -0.33
VTC4P47075 SUF2tP(AGG)C 72 nt12.96□□□□□ -0.33
VTC4P47075 SUF10tP(AGG)N 72 nt12.96□□□□□ -0.33
VTC4P47075 MEP2YNL142W 1500 nt12.96□□□□□ -0.33
VTC4P47075 YDR095CYDR095C 411 nt12.95□□□□□ -0.34
VTC4P47075 ALF1YNL148C 765 nt12.94□□□□□ -0.34
Retrieved 100 of 7,029 protein–RNA pairs in 26.5 ms