Protein–RNA interactions for Protein: P43593

UBP6, Ubiquitin carboxyl-terminal hydrolase 6, yeastyeast

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP6P43593 NSR1YGR159C 1245 nt20.11■□□□□ 0.81
UBP6P43593 YML009W-BYML009W-B 477 nt19.81■□□□□ 0.76
UBP6P43593 NOP1YDL014W 984 nt19.11■□□□□ 0.65
UBP6P43593 MDJ1YFL016C 1536 nt18.23■□□□□ 0.51
UBP6P43593 YKL036CYKL036C 393 nt17.26■□□□□ 0.35
UBP6P43593 YJL027CYJL027C 417 nt16.76■□□□□ 0.27
UBP6P43593 SRX1YKL086W 384 nt16.73■□□□□ 0.27
UBP6P43593 Q0297Q0297 156 nt16.65■□□□□ 0.26
UBP6P43593 DBP2YNL112W 1641 nt16.03■□□□□ 0.16
UBP6P43593 YCR051WYCR051W 669 nt15.78■□□□□ 0.12
UBP6P43593 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
UBP6P43593 SCS3YGL126W 1143 nt15.5■□□□□ 0.07
UBP6P43593 TRN1tP(UGG)A 72 nt15.39■□□□□ 0.05
UBP6P43593 SUF9tP(UGG)F 72 nt15.39■□□□□ 0.05
UBP6P43593 SUF8tP(UGG)H 72 nt15.39■□□□□ 0.05
UBP6P43593 tP(UGG)LtP(UGG)L 72 nt15.39■□□□□ 0.05
UBP6P43593 SUF7tP(UGG)M 72 nt15.39■□□□□ 0.05
UBP6P43593 tP(UGG)N1tP(UGG)N1 72 nt15.39■□□□□ 0.05
UBP6P43593 tP(UGG)N2tP(UGG)N2 72 nt15.39■□□□□ 0.05
UBP6P43593 tP(UGG)O1tP(UGG)O1 72 nt15.39■□□□□ 0.05
UBP6P43593 SUF11tP(UGG)O2 72 nt15.39■□□□□ 0.05
UBP6P43593 SSA3YBL075C 1950 nt15.38■□□□□ 0.05
UBP6P43593 RTC3YHR087W 336 nt15.22■□□□□ 0.03
UBP6P43593 CCC1YLR220W 969 nt15.15■□□□□ 0.02
UBP6P43593 YOL085CYOL085C 342 nt14.99□□□□□ -0.01
UBP6P43593 RPP1BYDL130W 321 nt14.92□□□□□ -0.02
UBP6P43593 RVS167YDR388W 1449 nt14.87□□□□□ -0.03
UBP6P43593 SCJ1YMR214W 1134 nt14.78□□□□□ -0.04
UBP6P43593 PKP1YIL042C 1185 nt14.77□□□□□ -0.05
UBP6P43593 PUT4YOR348C 1884 nt14.72□□□□□ -0.05
UBP6P43593 tP(UGG)O3tP(UGG)O3 72 nt14.41□□□□□ -0.1
UBP6P43593 SHR5YOL110W 714 nt14.3□□□□□ -0.12
UBP6P43593 PET122YER153C 765 nt14.29□□□□□ -0.12
UBP6P43593 ARE1YCR048W 1833 nt14.25□□□□□ -0.13
UBP6P43593 POA1YBR022W 534 nt14.15□□□□□ -0.14
UBP6P43593 URN1YPR152C 1398 nt14.14□□□□□ -0.15
UBP6P43593 OPI9YLR338W 858 nt14.06□□□□□ -0.16
UBP6P43593 SAH1YER043C 1350 nt14.05□□□□□ -0.16
UBP6P43593 YHR049C-AYHR049C-A 297 nt14.02□□□□□ -0.17
UBP6P43593 DEP1YAL013W 1218 nt13.99□□□□□ -0.17
UBP6P43593 BSC6YOL137W 1494 nt13.99□□□□□ -0.17
UBP6P43593 SCR1SCR1 522 nt13.98□□□□□ -0.17
UBP6P43593 SPT5YML010W 3192 nt13.96□□□□□ -0.17
UBP6P43593 YDJ1YNL064C 1230 nt13.96□□□□□ -0.17
UBP6P43593 Q0182Q0182 405 nt13.89□□□□□ -0.19
UBP6P43593 RRN5YLR141W 1092 nt13.84□□□□□ -0.19
UBP6P43593 RPN10YHR200W 807 nt13.8□□□□□ -0.2
UBP6P43593 ATS1YAL020C 1002 nt13.79□□□□□ -0.2
UBP6P43593 YNL208WYNL208W 600 nt13.76□□□□□ -0.21
UBP6P43593 SSA4YER103W 1929 nt13.7□□□□□ -0.22
UBP6P43593 GAR1YHR089C 618 nt13.67□□□□□ -0.22
UBP6P43593 PUN1YLR414C 792 nt13.62□□□□□ -0.23
UBP6P43593 BUD23YCR047C 828 nt13.6□□□□□ -0.23
UBP6P43593 YER088W-BYER088W-B 147 nt13.58□□□□□ -0.24
UBP6P43593 PTC2YER089C 1395 nt13.52□□□□□ -0.25
UBP6P43593 MOT3YMR070W 1473 nt13.49□□□□□ -0.25
UBP6P43593 YJR018WYJR018W 363 nt13.47□□□□□ -0.25
UBP6P43593 NAB2YGL122C 1578 nt13.41□□□□□ -0.26
UBP6P43593 RSB1YOR049C 1065 nt13.39□□□□□ -0.27
UBP6P43593 BDF1YLR399C 2061 nt13.29□□□□□ -0.28
UBP6P43593 YJR120WYJR120W 351 nt13.25□□□□□ -0.29
UBP6P43593 TIR1YER011W 765 nt13.24□□□□□ -0.29
UBP6P43593 FIS1YIL065C 468 nt13.21□□□□□ -0.29
UBP6P43593 MEP2YNL142W 1500 nt13.21□□□□□ -0.29
UBP6P43593 SSA1YAL005C 1929 nt13.2□□□□□ -0.3
UBP6P43593 DAL1YIR027C 1383 nt13.16□□□□□ -0.3
UBP6P43593 TAT1YBR069C 1860 nt13.1□□□□□ -0.31
UBP6P43593 INM2YDR287W 879 nt13.05□□□□□ -0.32
UBP6P43593 RPP2BYDR382W 333 nt13.04□□□□□ -0.32
UBP6P43593 FPR4YLR449W 1179 nt13.04□□□□□ -0.32
UBP6P43593 PHO4YFR034C 939 nt13.03□□□□□ -0.32
UBP6P43593 DCW1YKL046C 1350 nt13.01□□□□□ -0.33
UBP6P43593 YPS1YLR120C 1710 nt12.97□□□□□ -0.33
UBP6P43593 SRB2YHR041C 633 nt12.93□□□□□ -0.34
UBP6P43593 PST2YDR032C 597 nt12.85□□□□□ -0.35
UBP6P43593 YBL100CYBL100C 315 nt12.84□□□□□ -0.35
UBP6P43593 YBR220CYBR220C 1683 nt12.81□□□□□ -0.36
UBP6P43593 YDR095CYDR095C 411 nt12.81□□□□□ -0.36
UBP6P43593 YHR165W-AYHR165W-A 312 nt12.8□□□□□ -0.36
UBP6P43593 EMI2YDR516C 1503 nt12.79□□□□□ -0.36
UBP6P43593 BDH2YAL061W 1254 nt12.76□□□□□ -0.37
UBP6P43593 FUN26YAL022C 1554 nt12.69□□□□□ -0.38
UBP6P43593 YMR090WYMR090W 684 nt12.67□□□□□ -0.38
UBP6P43593 YDL221WYDL221W 552 nt12.65□□□□□ -0.38
UBP6P43593 PAC11YDR488C 1602 nt12.65□□□□□ -0.38
UBP6P43593 SDH1YKL148C 1923 nt12.62□□□□□ -0.39
UBP6P43593 CAC2YML102W 1407 nt12.62□□□□□ -0.39
UBP6P43593 PTP1YDL230W 1008 nt12.61□□□□□ -0.39
UBP6P43593 WWM1YFL010C 636 nt12.59□□□□□ -0.39
UBP6P43593 TRM9YML014W 840 nt12.56□□□□□ -0.4
UBP6P43593 RPP2AYOL039W 321 nt12.55□□□□□ -0.4
UBP6P43593 ALF1YNL148C 765 nt12.54□□□□□ -0.4
UBP6P43593 LSM3YLR438C-A 270 nt12.53□□□□□ -0.4
UBP6P43593 CCT6YDR188W 1641 nt12.51□□□□□ -0.41
UBP6P43593 PCH2YBR186W 1695 nt12.47□□□□□ -0.41
UBP6P43593 SIS1YNL007C 1059 nt12.45□□□□□ -0.42
UBP6P43593 GUT2YIL155C 1950 nt12.45□□□□□ -0.42
UBP6P43593 IRC15YPL017C 1500 nt12.43□□□□□ -0.42
UBP6P43593 SCC4YER147C 1875 nt12.43□□□□□ -0.42
UBP6P43593 YFL021C-AYFL021C-A 855 nt12.41□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms