RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W CDC48P25694 835 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W UTR4P32626 227 aa8.86□□□□□ -0.99
GGA2YHR108W SHP1P34223 423 aa8.86□□□□□ -0.99
GGA2YHR108W PEA2P40091 420 aa8.86□□□□□ -0.99
GGA2YHR108W PSY2P40164 858 aa8.86□□□□□ -0.99
GGA2YHR108W RPC17P47076 161 aa8.86□□□□□ -0.99
GGA2YHR108W UBP15P50101 1230 aa8.86□□□□□ -0.99
GGA2YHR108W CWC15Q03772 175 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W URH1Q04179 340 aa8.86□□□□□ -0.99
GGA2YHR108W YMR018WQ04364 514 aa8.86□□□□□ -0.99
GGA2YHR108W OMS1Q06668 471 aa8.86□□□□□ -0.99
GGA2YHR108W SMC5Q08204 1093 aa8.86□□□□□ -0.99
GGA2YHR108W APL5Q08951 932 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W SNF1P06782 633 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W VMA2P16140 517 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W YDJ1P25491 409 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W RAD54P32863 898 aa8.86□□□□□ -0.99
GGA2YHR108W BLI1P35727 113 aa8.86□□□□□ -0.99
GGA2YHR108W MCD4P36051 919 aa8.86□□□□□ -0.99
GGA2YHR108W HMF1P40037 129 aaKnown RBP8.86□□□□□ -0.99
GGA2YHR108W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
GGA2YHR108W VTC3Q02725 835 aa8.86□□□□□ -0.99
GGA2YHR108W GYL1Q04322 720 aa8.86□□□□□ -0.99
GGA2YHR108W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
GGA2YHR108W KIP1P28742 1111 aa8.85□□□□□ -0.99
GGA2YHR108W MUD1P32605 298 aaKnown RBP8.85□□□□□ -0.99
GGA2YHR108W GCG1P32656 232 aaKnown RBP8.85□□□□□ -0.99
GGA2YHR108W YKL050CP35736 922 aa8.85□□□□□ -0.99
GGA2YHR108W VPS41P38959 992 aa8.85□□□□□ -0.99
GGA2YHR108W VPS53P47061 822 aa8.85□□□□□ -0.99
GGA2YHR108W CTR1P49573 406 aa8.85□□□□□ -0.99
GGA2YHR108W MRS2Q01926 470 aa8.85□□□□□ -0.99
GGA2YHR108W NOC3Q07896 663 aaPredicted RBP8.85□□□□□ -0.99
GGA2YHR108W CDC19P00549 500 aaKnown RBP8.84□□□□□ -0.99
GGA2YHR108W RAD1P06777 1100 aa8.84□□□□□ -0.99
GGA2YHR108W MSH1P25846 959 aa8.84□□□□□ -0.99
GGA2YHR108W COT1P32798 439 aa8.84□□□□□ -0.99
GGA2YHR108W RCK2P38623 610 aa8.84□□□□□ -0.99
GGA2YHR108W ERC1P38767 581 aa8.84□□□□□ -0.99
GGA2YHR108W SAP1P39955 897 aaKnown RBP8.84□□□□□ -0.99
GGA2YHR108W TAM41P53230 385 aa8.84□□□□□ -0.99
GGA2YHR108W ECI1Q05871 280 aa8.84□□□□□ -0.99
GGA2YHR108W RIO1Q12196 484 aaKnown RBP8.84□□□□□ -0.99
GGA2YHR108W NAM7P30771 971 aaKnown RBP8.84□□□□□ -1
GGA2YHR108W SEC21P32074 935 aaKnown RBP8.84□□□□□ -1
GGA2YHR108W UBC6P33296 250 aaPredicted RBP8.84□□□□□ -1
GGA2YHR108W REG2P38232 338 aa8.84□□□□□ -1
GGA2YHR108W GPB2P39717 880 aa8.84□□□□□ -1
GGA2YHR108W CTK3P46963 296 aaPredicted RBP8.84□□□□□ -1
GGA2YHR108W RRT6P53117 311 aaPredicted RBP8.84□□□□□ -1
GGA2YHR108W EEB1Q02891 456 aa8.84□□□□□ -1
GGA2YHR108W DIG1Q03063 452 aaKnown RBP8.84□□□□□ -1
GGA2YHR108W YDL206WQ12424 762 aa8.84□□□□□ -1
GGA2YHR108W CDC33P07260 213 aaKnown RBP8.83□□□□□ -1
GGA2YHR108W VMA1P17255 1071 aaKnown RBP8.83□□□□□ -1
GGA2YHR108W TKL1P23254 680 aaKnown RBP8.83□□□□□ -1
GGA2YHR108W ECM32P32644 1121 aaKnown RBP8.83□□□□□ -1
GGA2YHR108W SEC8P32855 1065 aa8.83□□□□□ -1
GGA2YHR108W PIN4P34217 668 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
GGA2YHR108W TVP38P36164 337 aa8.83□□□□□ -1
GGA2YHR108W SPP381P38282 291 aaPredicted RBP8.83□□□□□ -1
GGA2YHR108W SPC72P39723 622 aa8.83□□□□□ -1
GGA2YHR108W YGR125WP53273 1036 aa8.83□□□□□ -1
GGA2YHR108W DEP1P31385 405 aa8.82□□□□□ -1
GGA2YHR108W LAS1P36146 502 aaPredicted RBP8.82□□□□□ -1
GGA2YHR108W TRZ1P36159 838 aaPredicted RBP8.82□□□□□ -1
GGA2YHR108W EXO5P38289 585 aa8.82□□□□□ -1
GGA2YHR108W RAD26P40352 1085 aa8.82□□□□□ -1
GGA2YHR108W NET1P47035 1189 aa8.82□□□□□ -1
GGA2YHR108W AVT1P47082 602 aa8.82□□□□□ -1
GGA2YHR108W ROD1Q02805 837 aa8.82□□□□□ -1
GGA2YHR108W CDC53Q12018 815 aaKnown RBP8.82□□□□□ -1
GGA2YHR108W SLX4Q12098 748 aa8.82□□□□□ -1
GGA2YHR108W ERP3Q12403 225 aa8.82□□□□□ -1
GGA2YHR108W BCH2P36122 765 aa8.81□□□□□ -1
GGA2YHR108W PTC4P38089 393 aa8.81□□□□□ -1
GGA2YHR108W RTT102P53330 157 aa8.81□□□□□ -1
GGA2YHR108W STE23Q06010 1027 aa8.81□□□□□ -1
GGA2YHR108W NCR1Q12200 1170 aa8.81□□□□□ -1
GGA2YHR108W OSW2Q12202 724 aa8.81□□□□□ -1
GGA2YHR108W SPO21Q12411 609 aa8.81□□□□□ -1
GGA2YHR108W AVT3P36062 692 aa8.81□□□□□ -1
GGA2YHR108W RGD1P38339 666 aa8.81□□□□□ -1
GGA2YHR108W HIS2P38635 335 aa8.81□□□□□ -1
GGA2YHR108W PNT1P38969 423 aa8.81□□□□□ -1
GGA2YHR108W SAK1P38990 1142 aa8.81□□□□□ -1
GGA2YHR108W YEL025CP39991 1188 aa8.81□□□□□ -1
GGA2YHR108W NPP2P39997 493 aa8.81□□□□□ -1
GGA2YHR108W SLD5Q03406 294 aa8.81□□□□□ -1
GGA2YHR108W AIM41Q12032 185 aa8.81□□□□□ -1
GGA2YHR108W YLR462WO13556 202 aa8.8□□□□□ -1
GGA2YHR108W SPT2P06843 333 aaPredicted RBP8.8□□□□□ -1
GGA2YHR108W PKC1P24583 1151 aa8.8□□□□□ -1
GGA2YHR108W YHL049CP38722 271 aa8.8□□□□□ -1
GGA2YHR108W YEL075CP39972 122 aa8.8□□□□□ -1
GGA2YHR108W YER189WP40104 122 aa8.8□□□□□ -1
GGA2YHR108W YFL064CP43540 174 aa8.8□□□□□ -1
GGA2YHR108W CLA4P48562 842 aa8.8□□□□□ -1
GGA2YHR108W HSH155P49955 971 aaKnown RBP8.8□□□□□ -1
GGA2YHR108W MDR1P53258 950 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms