RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W SGS1P35187 1447 aa14.54□□□□□ -0.08
GGA2YHR108W INO80P53115 1489 aa14.27□□□□□ -0.12
GGA2YHR108W TCB3Q03640 1545 aaKnown RBP14.05□□□□□ -0.16
GGA2YHR108W SPA2P23201 1466 aaKnown RBP14□□□□□ -0.17
GGA2YHR108W SSN2P38931 1420 aa13.91□□□□□ -0.18
GGA2YHR108W TY1B-DR4Q07793 1604 aa13.84□□□□□ -0.19
GGA2YHR108W MON2P48563 1636 aaPredicted RBP13.72□□□□□ -0.21
GGA2YHR108W HSL1P34244 1518 aa13.6□□□□□ -0.23
GGA2YHR108W SPT6P23615 1451 aaKnown RBP13.57□□□□□ -0.24
GGA2YHR108W DRS1P32892 752 aaKnown RBP13.53□□□□□ -0.24
GGA2YHR108W SWR1Q05471 1514 aa13.5□□□□□ -0.25
GGA2YHR108W HIR3P47171 1648 aa13.36□□□□□ -0.27
GGA2YHR108W XRN1P22147 1528 aaKnown RBP13.3□□□□□ -0.28
GGA2YHR108W REV3P14284 1504 aa13.12□□□□□ -0.31
GGA2YHR108W DNA2P38859 1522 aa13.07□□□□□ -0.32
GGA2YHR108W KOG1P38873 1557 aa13.07□□□□□ -0.32
GGA2YHR108W THO2P53552 1597 aaKnown RBP13.05□□□□□ -0.32
GGA2YHR108W SIN3P22579 1536 aa13.04□□□□□ -0.32
GGA2YHR108W SSK2P53599 1579 aa12.96□□□□□ -0.33
GGA2YHR108W TAF2P23255 1407 aa12.94□□□□□ -0.34
GGA2YHR108W BUD4P47136 1447 aa12.9□□□□□ -0.34
GGA2YHR108W ESP1Q03018 1630 aa12.84□□□□□ -0.35
GGA2YHR108W MYO2P19524 1574 aaKnown RBP12.84□□□□□ -0.35
GGA2YHR108W ECM5Q03214 1411 aa12.82□□□□□ -0.36
GGA2YHR108W ATG2P53855 1592 aa12.77□□□□□ -0.37
GGA2YHR108W SKI3P17883 1432 aaKnown RBP12.74□□□□□ -0.37
GGA2YHR108W YPK9Q12697 1472 aa12.66□□□□□ -0.38
GGA2YHR108W MDS3P53094 1487 aa12.65□□□□□ -0.38
GGA2YHR108W PEP1P32319 1579 aa12.63□□□□□ -0.39
GGA2YHR108W POL1P13382 1468 aa12.62□□□□□ -0.39
GGA2YHR108W CHD1P32657 1468 aa12.59□□□□□ -0.39
GGA2YHR108W STU1P38198 1513 aa12.57□□□□□ -0.4
GGA2YHR108W SCC2Q04002 1493 aa12.53□□□□□ -0.4
GGA2YHR108W MMS22Q06164 1454 aa12.53□□□□□ -0.4
GGA2YHR108W YTA7P40340 1379 aa12.52□□□□□ -0.41
GGA2YHR108W RKR1Q04781 1562 aa12.48□□□□□ -0.41
GGA2YHR108W RPO31P04051 1460 aa12.48□□□□□ -0.41
GGA2YHR108W YOR1P53049 1477 aa12.44□□□□□ -0.42
GGA2YHR108W UFD4P33202 1483 aa12.42□□□□□ -0.42
GGA2YHR108W BPT1P14772 1559 aa12.41□□□□□ -0.42
GGA2YHR108W TOP2P06786 1428 aaKnown RBP12.4□□□□□ -0.42
GGA2YHR108W SMC4Q12267 1418 aa12.37□□□□□ -0.43
GGA2YHR108W YCF1P39109 1515 aaKnown RBP12.37□□□□□ -0.43
GGA2YHR108W MYO4P32492 1471 aa12.36□□□□□ -0.43
GGA2YHR108W SAS10Q12136 610 aaPredicted RBP12.32□□□□□ -0.44
GGA2YHR108W TY2B-LR1P0C2J3 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-FP0CX63 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-GR2P0CX64 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-CP25384 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-DR2Q03494 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY1B-DR1Q03855 1755 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-DR3Q07791 1770 aaKnown RBP12.3□□□□□ -0.44
GGA2YHR108W TY2B-OR1Q12113 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-DR1Q12472 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY2B-OR2Q12501 1770 aa12.3□□□□□ -0.44
GGA2YHR108W TY1B-DR3Q99231 1755 aa12.24□□□□□ -0.45
GGA2YHR108W TAF7Q05021 590 aa12.21□□□□□ -0.45
GGA2YHR108W TY2B-BQ12491 1770 aa12.19□□□□□ -0.46
GGA2YHR108W SNQ2P32568 1501 aaKnown RBP12.17□□□□□ -0.46
GGA2YHR108W STH1P32597 1359 aa12.16□□□□□ -0.46
GGA2YHR108W RQC2Q12532 1038 aaKnown RBP12.14□□□□□ -0.47
GGA2YHR108W SPP41P38904 1435 aa12.13□□□□□ -0.47
GGA2YHR108W TY1B-BRQ12193 1756 aa12.1□□□□□ -0.47
GGA2YHR108W TY1B-GR3Q12316 1755 aa12.1□□□□□ -0.47
GGA2YHR108W TY1B-ORQ92393 1755 aa12.1□□□□□ -0.47
GGA2YHR108W TY1B-HO13535 1793 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-DR5P0C2I2 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-DR6P0C2I3 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-LR2P0C2I5 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-LR3P0C2I6 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W TY1B-PR1P0C2I9 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W TY1B-PR2P0C2J0 1756 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-PR3P0C2J1 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W TY1B-JR1P47098 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-ML2Q03434 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W TY1B-ER1Q03612 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-ML1Q04711 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W TY1B-GR2Q12269 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-OLQ12273 1755 aa12.09□□□□□ -0.47
GGA2YHR108W TY1B-PLQ12414 1755 aaKnown RBP12.09□□□□□ -0.47
GGA2YHR108W CDC25P04821 1589 aa12.09□□□□□ -0.47
GGA2YHR108W MLP2P40457 1679 aa12.08□□□□□ -0.48
GGA2YHR108W TRM732Q03496 1420 aa12.06□□□□□ -0.48
GGA2YHR108W RSE1Q04693 1361 aaKnown RBP12.04□□□□□ -0.48
GGA2YHR108W PDR15Q04182 1529 aaKnown RBP12.04□□□□□ -0.48
GGA2YHR108W PAN1P32521 1480 aa12.03□□□□□ -0.48
GGA2YHR108W TSC11P40061 1430 aa12.03□□□□□ -0.48
GGA2YHR108W VTH1P40438 1549 aa12.03□□□□□ -0.48
GGA2YHR108W VTH2P40890 1549 aa12.03□□□□□ -0.48
GGA2YHR108W IKI3Q06706 1349 aaKnown RBP12.01□□□□□ -0.49
GGA2YHR108W IFH1P39520 1085 aa11.99□□□□□ -0.49
GGA2YHR108W ULS1Q08562 1619 aa11.97□□□□□ -0.49
GGA2YHR108W GEA1P47102 1408 aaPredicted RBP11.97□□□□□ -0.49
GGA2YHR108W ESC1Q03661 1658 aaKnown RBP11.94□□□□□ -0.5
GGA2YHR108W MTC1P47018 478 aaKnown RBP11.92□□□□□ -0.5
GGA2YHR108W SNT2P53127 1403 aa11.92□□□□□ -0.5
GGA2YHR108W TY1B-JR2P47100 1755 aaKnown RBP11.91□□□□□ -0.5
GGA2YHR108W TY1B-ER2Q03619 1755 aa11.91□□□□□ -0.5
GGA2YHR108W TY1B-MR1Q04214 1755 aa11.91□□□□□ -0.5
GGA2YHR108W TY1B-MR2Q04670 1755 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms