Protein–RNA interactions for Protein: Q05871

ECI1, 3,2-trans-enoyl-CoA isomerase, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECI1Q05871 NSR1YGR159C 1245 nt21.32■■□□□ 1
ECI1Q05871 YML009W-BYML009W-B 477 nt21.16■□□□□ 0.98
ECI1Q05871 NOP1YDL014W 984 nt20.38■□□□□ 0.85
ECI1Q05871 MDJ1YFL016C 1536 nt19.3■□□□□ 0.68
ECI1Q05871 YKL036CYKL036C 393 nt18.5■□□□□ 0.55
ECI1Q05871 SRX1YKL086W 384 nt17.83■□□□□ 0.44
ECI1Q05871 YJL027CYJL027C 417 nt17.77■□□□□ 0.44
ECI1Q05871 Q0297Q0297 156 nt17.75■□□□□ 0.43
ECI1Q05871 DBP2YNL112W 1641 nt16.93■□□□□ 0.3
ECI1Q05871 YCR051WYCR051W 669 nt16.91■□□□□ 0.3
ECI1Q05871 SCS3YGL126W 1143 nt16.66■□□□□ 0.26
ECI1Q05871 YBR190WYBR190W 312 nt16.52■□□□□ 0.24
ECI1Q05871 TRN1tP(UGG)A 72 nt16.34■□□□□ 0.21
ECI1Q05871 SUF9tP(UGG)F 72 nt16.34■□□□□ 0.21
ECI1Q05871 SUF8tP(UGG)H 72 nt16.34■□□□□ 0.21
ECI1Q05871 tP(UGG)LtP(UGG)L 72 nt16.34■□□□□ 0.21
ECI1Q05871 SUF7tP(UGG)M 72 nt16.34■□□□□ 0.21
ECI1Q05871 tP(UGG)N1tP(UGG)N1 72 nt16.34■□□□□ 0.21
ECI1Q05871 tP(UGG)N2tP(UGG)N2 72 nt16.34■□□□□ 0.21
ECI1Q05871 tP(UGG)O1tP(UGG)O1 72 nt16.34■□□□□ 0.21
ECI1Q05871 SUF11tP(UGG)O2 72 nt16.34■□□□□ 0.21
ECI1Q05871 CCC1YLR220W 969 nt16.21■□□□□ 0.19
ECI1Q05871 RTC3YHR087W 336 nt16.15■□□□□ 0.18
ECI1Q05871 YOL085CYOL085C 342 nt16.05■□□□□ 0.16
ECI1Q05871 RPP1BYDL130W 321 nt15.92■□□□□ 0.14
ECI1Q05871 PKP1YIL042C 1185 nt15.89■□□□□ 0.13
ECI1Q05871 RVS167YDR388W 1449 nt15.78■□□□□ 0.12
ECI1Q05871 SCJ1YMR214W 1134 nt15.69■□□□□ 0.1
ECI1Q05871 tP(UGG)O3tP(UGG)O3 72 nt15.35■□□□□ 0.05
ECI1Q05871 PUT4YOR348C 1884 nt15.29■□□□□ 0.04
ECI1Q05871 PET122YER153C 765 nt15.28■□□□□ 0.04
ECI1Q05871 SHR5YOL110W 714 nt15.17■□□□□ 0.02
ECI1Q05871 SSA3YBL075C 1950 nt15.11■□□□□ 0.01
ECI1Q05871 URN1YPR152C 1398 nt14.99□□□□□ -0.01
ECI1Q05871 SCR1SCR1 522 nt14.98□□□□□ -0.01
ECI1Q05871 DEP1YAL013W 1218 nt14.92□□□□□ -0.02
ECI1Q05871 ARE1YCR048W 1833 nt14.91□□□□□ -0.02
ECI1Q05871 SAH1YER043C 1350 nt14.85□□□□□ -0.03
ECI1Q05871 OPI9YLR338W 858 nt14.84□□□□□ -0.03
ECI1Q05871 YDJ1YNL064C 1230 nt14.83□□□□□ -0.04
ECI1Q05871 RRN5YLR141W 1092 nt14.82□□□□□ -0.04
ECI1Q05871 POA1YBR022W 534 nt14.81□□□□□ -0.04
ECI1Q05871 ATS1YAL020C 1002 nt14.8□□□□□ -0.04
ECI1Q05871 YHR049C-AYHR049C-A 297 nt14.72□□□□□ -0.05
ECI1Q05871 RPN10YHR200W 807 nt14.64□□□□□ -0.07
ECI1Q05871 GAR1YHR089C 618 nt14.6□□□□□ -0.07
ECI1Q05871 YNL208WYNL208W 600 nt14.59□□□□□ -0.07
ECI1Q05871 BSC6YOL137W 1494 nt14.55□□□□□ -0.08
ECI1Q05871 YER088W-BYER088W-B 147 nt14.51□□□□□ -0.09
ECI1Q05871 PUN1YLR414C 792 nt14.39□□□□□ -0.11
ECI1Q05871 RSB1YOR049C 1065 nt14.39□□□□□ -0.11
ECI1Q05871 BUD23YCR047C 828 nt14.37□□□□□ -0.11
ECI1Q05871 PTC2YER089C 1395 nt14.31□□□□□ -0.12
ECI1Q05871 YJR018WYJR018W 363 nt14.28□□□□□ -0.12
ECI1Q05871 NAB2YGL122C 1578 nt14.13□□□□□ -0.15
ECI1Q05871 TIR1YER011W 765 nt14.11□□□□□ -0.15
ECI1Q05871 SPT5YML010W 3192 nt14.09□□□□□ -0.15
ECI1Q05871 SSA1YAL005C 1929 nt14.02□□□□□ -0.16
ECI1Q05871 YJR120WYJR120W 351 nt14.01□□□□□ -0.17
ECI1Q05871 FIS1YIL065C 468 nt13.91□□□□□ -0.18
ECI1Q05871 DAL1YIR027C 1383 nt13.89□□□□□ -0.19
ECI1Q05871 FPR4YLR449W 1179 nt13.88□□□□□ -0.19
ECI1Q05871 RPP2BYDR382W 333 nt13.86□□□□□ -0.19
ECI1Q05871 INM2YDR287W 879 nt13.8□□□□□ -0.2
ECI1Q05871 PST2YDR032C 597 nt13.77□□□□□ -0.21
ECI1Q05871 SSA4YER103W 1929 nt13.77□□□□□ -0.21
ECI1Q05871 PHO4YFR034C 939 nt13.77□□□□□ -0.21
ECI1Q05871 SRB2YHR041C 633 nt13.76□□□□□ -0.21
ECI1Q05871 MEP2YNL142W 1500 nt13.68□□□□□ -0.22
ECI1Q05871 YPS1YLR120C 1710 nt13.62□□□□□ -0.23
ECI1Q05871 YBL100CYBL100C 315 nt13.62□□□□□ -0.23
ECI1Q05871 BDH2YAL061W 1254 nt13.54□□□□□ -0.24
ECI1Q05871 YHR165W-AYHR165W-A 312 nt13.51□□□□□ -0.25
ECI1Q05871 DCW1YKL046C 1350 nt13.48□□□□□ -0.25
ECI1Q05871 YDR095CYDR095C 411 nt13.48□□□□□ -0.25
ECI1Q05871 WWM1YFL010C 636 nt13.46□□□□□ -0.25
ECI1Q05871 FUN26YAL022C 1554 nt13.45□□□□□ -0.26
ECI1Q05871 TRM9YML014W 840 nt13.35□□□□□ -0.27
ECI1Q05871 ALF1YNL148C 765 nt13.32□□□□□ -0.28
ECI1Q05871 SHU1YHL006C 453 nt13.31□□□□□ -0.28
ECI1Q05871 EMI2YDR516C 1503 nt13.29□□□□□ -0.28
ECI1Q05871 LSM3YLR438C-A 270 nt13.28□□□□□ -0.28
ECI1Q05871 YAL037C-BYAL037C-B 975 nt13.26□□□□□ -0.29
ECI1Q05871 BDF1YLR399C 2061 nt13.25□□□□□ -0.29
ECI1Q05871 PTP1YDL230W 1008 nt13.24□□□□□ -0.29
ECI1Q05871 RPP2AYOL039W 321 nt13.23□□□□□ -0.29
ECI1Q05871 CCT6YDR188W 1641 nt13.22□□□□□ -0.29
ECI1Q05871 CAC2YML102W 1407 nt13.22□□□□□ -0.29
ECI1Q05871 YGR021WYGR021W 873 nt13.2□□□□□ -0.3
ECI1Q05871 YFL021C-AYFL021C-A 855 nt13.19□□□□□ -0.3
ECI1Q05871 YMR090WYMR090W 684 nt13.19□□□□□ -0.3
ECI1Q05871 HOM6YJR139C 1080 nt13.17□□□□□ -0.3
ECI1Q05871 YDL221WYDL221W 552 nt13.15□□□□□ -0.3
ECI1Q05871 YBR220CYBR220C 1683 nt13.15□□□□□ -0.31
ECI1Q05871 SIS1YNL007C 1059 nt13.13□□□□□ -0.31
ECI1Q05871 SUF2tP(AGG)C 72 nt13.12□□□□□ -0.31
ECI1Q05871 SUF10tP(AGG)N 72 nt13.12□□□□□ -0.31
ECI1Q05871 MNP1YGL068W 585 nt13.08□□□□□ -0.32
ECI1Q05871 TAT1YBR069C 1860 nt13.07□□□□□ -0.32
ECI1Q05871 SDH1YKL148C 1923 nt13.05□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 193.7 ms