RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B MRPS18P42847 217 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B YJL132WP47014 750 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B UFD2P54860 961 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B UTP14Q04500 899 aaKnown RBP2.84□□□□□ -1.96
YGR038C-BYGR038C-B HOS1Q12214 470 aa2.84□□□□□ -1.96
YGR038C-BYGR038C-B AI3P03877 415 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B ATP4P05626 244 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RVS161P25343 265 aaKnown RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B GLY1P37303 387 aaKnown RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B CDC27P38042 758 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RRP3P38712 501 aaKnown RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B SPT8P38915 602 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RGA1P39083 1007 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YJR054WP47114 497 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B EFM3P47163 339 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YNR065CP53751 1116 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RSC4Q02206 625 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B IOC4Q04213 475 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B ARP9Q05123 467 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B ECI1Q05871 280 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B EST2Q06163 884 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B GPI13Q07830 1017 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YDR056CQ12025 205 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B REC8Q12188 680 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B SFI1Q12369 946 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B IMP2'P32351 346 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RRM3P38766 723 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B PTI1P39927 425 aaPredicted RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B IRC4Q03036 179 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B MTC5Q03897 1148 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B VID22Q05934 901 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YOR223WQ12015 292 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B SPS1P08458 490 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B RPL35AP0CX84 120 aaKnown RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B RPL35BP0CX85 120 aaKnown RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B PXA2P34230 853 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B PCA1P38360 1216 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B THI6P41835 540 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B DPL1Q05567 589 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B AAD4Q07747 329 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B SGF29P25554 259 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B NTH2P35172 780 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B PCS60P38137 543 aaKnown RBP RIP-Chip data2.83□□□□□ -1.96not detected
YGR038C-BYGR038C-B GEM1P39722 662 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B SUR7P54003 302 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B VPS60Q03390 229 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B ARG7Q04728 441 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YLR455WQ06188 304 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B YSH1Q06224 779 aaPredicted RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B SPN1Q06505 410 aaPredicted RBP2.83□□□□□ -1.96
YGR038C-BYGR038C-B ATG23Q06671 453 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B NDE2Q07500 545 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B SFG1Q12507 346 aa2.83□□□□□ -1.96
YGR038C-BYGR038C-B GCD1P09032 578 aaPredicted RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B HSP78P33416 811 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PIN4P34217 668 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
YGR038C-BYGR038C-B DMA1P38823 416 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B ORC6P38826 435 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B AIM23P47015 356 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B YGR250CP53316 781 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B HDA3Q06623 655 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B ADY3Q07732 790 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B YEH1Q07804 573 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B NOP58Q12499 511 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B SRN2Q99176 213 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B CDC25P04821 1589 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B HAP4P14064 554 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B RAD53P22216 821 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PPH3P32345 308 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B SPT16P32558 1035 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B MRE11P32829 692 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B SFB3P38810 929 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PEX28P38848 579 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PRM9P39551 298 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B MRX1P40050 688 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B TGL3P40308 642 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B SUM1P46676 1062 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B DLD2P46681 530 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B MET13P53128 600 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B HOP2P53187 214 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B DSE4P53753 1117 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B UBX4P54730 416 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B MSC2Q03455 724 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B OYE2Q03558 400 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B CWC2Q12046 339 aaPredicted RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B PUS1Q12211 544 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B POL1P13382 1468 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B NIP1P32497 812 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B STB6P36085 766 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B REV7P38927 245 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B DAN4P47179 1161 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PSP1P50896 841 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B SUB1P54000 292 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B STE20Q03497 939 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B SLX4Q12098 748 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B SVS1Q12254 260 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B VCX1Q99385 411 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PHR1P05066 565 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
YGR038C-BYGR038C-B ATP1P07251 545 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B MIS1P09440 975 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms