Protein–RNA interactions for Protein: P38810

SFB3, SED5-binding protein 3, yeastyeast

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB3P38810 YML009W-BYML009W-B 477 nt21.38■■□□□ 1.01
SFB3P38810 NSR1YGR159C 1245 nt20.92■□□□□ 0.94
SFB3P38810 NOP1YDL014W 984 nt20.89■□□□□ 0.93
SFB3P38810 YKL036CYKL036C 393 nt19.59■□□□□ 0.73
SFB3P38810 Q0297Q0297 156 nt18.39■□□□□ 0.53
SFB3P38810 YJL027CYJL027C 417 nt18.36■□□□□ 0.53
SFB3P38810 MDJ1YFL016C 1536 nt18.31■□□□□ 0.52
SFB3P38810 SRX1YKL086W 384 nt18.26■□□□□ 0.51
SFB3P38810 SCS3YGL126W 1143 nt17.99■□□□□ 0.47
SFB3P38810 YCR051WYCR051W 669 nt17.37■□□□□ 0.37
SFB3P38810 YOL085CYOL085C 342 nt16.95■□□□□ 0.3
SFB3P38810 PKP1YIL042C 1185 nt16.68■□□□□ 0.26
SFB3P38810 RPP1BYDL130W 321 nt16.5■□□□□ 0.23
SFB3P38810 TRN1tP(UGG)A 72 nt16.32■□□□□ 0.2
SFB3P38810 SUF9tP(UGG)F 72 nt16.32■□□□□ 0.2
SFB3P38810 SUF8tP(UGG)H 72 nt16.32■□□□□ 0.2
SFB3P38810 tP(UGG)LtP(UGG)L 72 nt16.32■□□□□ 0.2
SFB3P38810 SUF7tP(UGG)M 72 nt16.32■□□□□ 0.2
SFB3P38810 tP(UGG)N1tP(UGG)N1 72 nt16.32■□□□□ 0.2
SFB3P38810 tP(UGG)N2tP(UGG)N2 72 nt16.32■□□□□ 0.2
SFB3P38810 tP(UGG)O1tP(UGG)O1 72 nt16.32■□□□□ 0.2
SFB3P38810 SUF11tP(UGG)O2 72 nt16.32■□□□□ 0.2
SFB3P38810 SCJ1YMR214W 1134 nt16.32■□□□□ 0.2
SFB3P38810 DBP2YNL112W 1641 nt16.3■□□□□ 0.2
SFB3P38810 CCC1YLR220W 969 nt16.18■□□□□ 0.18
SFB3P38810 ATS1YAL020C 1002 nt16.17■□□□□ 0.18
SFB3P38810 PET122YER153C 765 nt15.74■□□□□ 0.11
SFB3P38810 SCR1SCR1 522 nt15.67■□□□□ 0.1
SFB3P38810 tP(UGG)O3tP(UGG)O3 72 nt15.55■□□□□ 0.08
SFB3P38810 YBR190WYBR190W 312 nt15.51■□□□□ 0.07
SFB3P38810 RVS167YDR388W 1449 nt15.43■□□□□ 0.06
SFB3P38810 RRN5YLR141W 1092 nt15.32■□□□□ 0.04
SFB3P38810 RTC3YHR087W 336 nt15.22■□□□□ 0.03
SFB3P38810 RSB1YOR049C 1065 nt15.12■□□□□ 0.01
SFB3P38810 YDJ1YNL064C 1230 nt15.02■□□□□ -0
SFB3P38810 YER088W-BYER088W-B 147 nt15.01□□□□□ -0.01
SFB3P38810 SHR5YOL110W 714 nt14.96□□□□□ -0.01
SFB3P38810 PST2YDR032C 597 nt14.91□□□□□ -0.02
SFB3P38810 GAR1YHR089C 618 nt14.67□□□□□ -0.06
SFB3P38810 YKL097CYKL097C 411 nt14.52□□□□□ -0.09
SFB3P38810 DEP1YAL013W 1218 nt14.45□□□□□ -0.1
SFB3P38810 URN1YPR152C 1398 nt14.35□□□□□ -0.11
SFB3P38810 SHU1YHL006C 453 nt14.25□□□□□ -0.13
SFB3P38810 YNL208WYNL208W 600 nt14.24□□□□□ -0.13
SFB3P38810 RPN10YHR200W 807 nt14.21□□□□□ -0.13
SFB3P38810 TIR1YER011W 765 nt14.15□□□□□ -0.14
SFB3P38810 PUT4YOR348C 1884 nt14.1□□□□□ -0.15
SFB3P38810 OPI9YLR338W 858 nt14.06□□□□□ -0.16
SFB3P38810 YAL037C-BYAL037C-B 975 nt13.94□□□□□ -0.18
SFB3P38810 SSA1YAL005C 1929 nt13.91□□□□□ -0.18
SFB3P38810 SAH1YER043C 1350 nt13.89□□□□□ -0.19
SFB3P38810 YOR139CYOR139C 393 nt13.86□□□□□ -0.19
SFB3P38810 ARE1YCR048W 1833 nt13.8□□□□□ -0.2
SFB3P38810 SRB2YHR041C 633 nt13.74□□□□□ -0.21
SFB3P38810 YJR018WYJR018W 363 nt13.71□□□□□ -0.21
SFB3P38810 NPL3YDR432W 1245 nt13.7□□□□□ -0.22
SFB3P38810 POA1YBR022W 534 nt13.68□□□□□ -0.22
SFB3P38810 PUN1YLR414C 792 nt13.66□□□□□ -0.22
SFB3P38810 YHR049C-AYHR049C-A 297 nt13.64□□□□□ -0.23
SFB3P38810 YGR021WYGR021W 873 nt13.6□□□□□ -0.23
SFB3P38810 WWM1YFL010C 636 nt13.59□□□□□ -0.23
SFB3P38810 MNP1YGL068W 585 nt13.58□□□□□ -0.24
SFB3P38810 HOM6YJR139C 1080 nt13.57□□□□□ -0.24
SFB3P38810 YJR120WYJR120W 351 nt13.56□□□□□ -0.24
SFB3P38810 RPP2BYDR382W 333 nt13.53□□□□□ -0.24
SFB3P38810 SSA3YBL075C 1950 nt13.51□□□□□ -0.25
SFB3P38810 YOL037CYOL037C 354 nt13.46□□□□□ -0.25
SFB3P38810 PTC2YER089C 1395 nt13.45□□□□□ -0.26
SFB3P38810 BSC6YOL137W 1494 nt13.4□□□□□ -0.26
SFB3P38810 RKM5YLR137W 1104 nt13.37□□□□□ -0.27
SFB3P38810 YFL021C-AYFL021C-A 855 nt13.35□□□□□ -0.27
SFB3P38810 BUD23YCR047C 828 nt13.34□□□□□ -0.27
SFB3P38810 BDH2YAL061W 1254 nt13.3□□□□□ -0.28
SFB3P38810 tM(CAU)CtM(CAU)C 72 nt13.29□□□□□ -0.28
SFB3P38810 IMT4tM(CAU)E 72 nt13.29□□□□□ -0.28
SFB3P38810 IMT3tM(CAU)J3 72 nt13.29□□□□□ -0.28
SFB3P38810 IMT1tM(CAU)O1 72 nt13.29□□□□□ -0.28
SFB3P38810 IMT2tM(CAU)P 72 nt13.29□□□□□ -0.28
SFB3P38810 NAB2YGL122C 1578 nt13.24□□□□□ -0.29
SFB3P38810 LSM3YLR438C-A 270 nt13.17□□□□□ -0.3
SFB3P38810 INM2YDR287W 879 nt13.16□□□□□ -0.3
SFB3P38810 FPR4YLR449W 1179 nt13.12□□□□□ -0.31
SFB3P38810 PUS2YGL063W 1113 nt13.11□□□□□ -0.31
SFB3P38810 YLR281CYLR281C 468 nt13.11□□□□□ -0.31
SFB3P38810 YBL100CYBL100C 315 nt13.11□□□□□ -0.31
SFB3P38810 DAL1YIR027C 1383 nt13.1□□□□□ -0.31
SFB3P38810 FIS1YIL065C 468 nt13.06□□□□□ -0.32
SFB3P38810 WHI5YOR083W 888 nt13.03□□□□□ -0.32
SFB3P38810 PHO4YFR034C 939 nt12.99□□□□□ -0.33
SFB3P38810 TRM9YML014W 840 nt12.99□□□□□ -0.33
SFB3P38810 FUN26YAL022C 1554 nt12.96□□□□□ -0.33
SFB3P38810 MOT3YMR070W 1473 nt12.92□□□□□ -0.34
SFB3P38810 CCT6YDR188W 1641 nt12.84□□□□□ -0.35
SFB3P38810 SPT5YML010W 3192 nt12.83□□□□□ -0.36
SFB3P38810 DSK2YMR276W 1122 nt12.8□□□□□ -0.36
SFB3P38810 FMP45YDL222C 930 nt12.79□□□□□ -0.36
SFB3P38810 YLR154C-GYLR154C-G 150 nt12.79□□□□□ -0.36
SFB3P38810 YPR011CYPR011C 981 nt12.77□□□□□ -0.37
SFB3P38810 YLR236CYLR236C 324 nt12.75□□□□□ -0.37
SFB3P38810 IMP2'YIL154C 1041 nt12.74□□□□□ -0.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms