Protein–RNA interactions for Protein: P32558

SPT16, FACT complex subunit SPT16, yeastyeast

Known RBP Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT16P32558 YML009W-BYML009W-B 477 nt19.79■□□□□ 0.76
SPT16P32558 NSR1YGR159C 1245 nt19.54■□□□□ 0.72
SPT16P32558 NOP1YDL014W 984 nt19.34■□□□□ 0.69
SPT16P32558 YKL036CYKL036C 393 nt18.05■□□□□ 0.48
SPT16P32558 MDJ1YFL016C 1536 nt17.56■□□□□ 0.4
SPT16P32558 Q0297Q0297 156 nt17.02■□□□□ 0.32
SPT16P32558 SRX1YKL086W 384 nt16.91■□□□□ 0.3
SPT16P32558 YJL027CYJL027C 417 nt16.88■□□□□ 0.29
SPT16P32558 SCS3YGL126W 1143 nt16.54■□□□□ 0.24
SPT16P32558 YCR051WYCR051W 669 nt16.04■□□□□ 0.16
SPT16P32558 YOL085CYOL085C 342 nt15.64■□□□□ 0.09
SPT16P32558 SSA3YBL075C 1950 nt15.42■□□□□ 0.06
SPT16P32558 PKP1YIL042C 1185 nt15.36■□□□□ 0.05
SPT16P32558 RPP1BYDL130W 321 nt15.27■□□□□ 0.04
SPT16P32558 DBP2YNL112W 1641 nt15.25■□□□□ 0.03
SPT16P32558 TRN1tP(UGG)A 72 nt15.17■□□□□ 0.02
SPT16P32558 SUF9tP(UGG)F 72 nt15.17■□□□□ 0.02
SPT16P32558 SUF8tP(UGG)H 72 nt15.17■□□□□ 0.02
SPT16P32558 tP(UGG)LtP(UGG)L 72 nt15.17■□□□□ 0.02
SPT16P32558 SUF7tP(UGG)M 72 nt15.17■□□□□ 0.02
SPT16P32558 tP(UGG)N1tP(UGG)N1 72 nt15.17■□□□□ 0.02
SPT16P32558 tP(UGG)N2tP(UGG)N2 72 nt15.17■□□□□ 0.02
SPT16P32558 tP(UGG)O1tP(UGG)O1 72 nt15.17■□□□□ 0.02
SPT16P32558 SUF11tP(UGG)O2 72 nt15.17■□□□□ 0.02
SPT16P32558 YBR190WYBR190W 312 nt15.11■□□□□ 0.01
SPT16P32558 CCC1YLR220W 969 nt14.99□□□□□ -0.01
SPT16P32558 SCJ1YMR214W 1134 nt14.94□□□□□ -0.02
SPT16P32558 ATS1YAL020C 1002 nt14.86□□□□□ -0.03
SPT16P32558 RTC3YHR087W 336 nt14.76□□□□□ -0.05
SPT16P32558 PET122YER153C 765 nt14.56□□□□□ -0.08
SPT16P32558 YGR139WYGR139W 339 nt14.53□□□□□ -0.08
SPT16P32558 RVS167YDR388W 1449 nt14.5□□□□□ -0.09
SPT16P32558 SCR1SCR1 522 nt14.44□□□□□ -0.1
SPT16P32558 tP(UGG)O3tP(UGG)O3 72 nt14.42□□□□□ -0.1
SPT16P32558 PUT4YOR348C 1884 nt14.25□□□□□ -0.13
SPT16P32558 SSA1YAL005C 1929 nt14.2□□□□□ -0.14
SPT16P32558 RRN5YLR141W 1092 nt14.15□□□□□ -0.14
SPT16P32558 Q0182Q0182 405 nt14.09□□□□□ -0.15
SPT16P32558 MOT3YMR070W 1473 nt14.03□□□□□ -0.16
SPT16P32558 YDJ1YNL064C 1230 nt13.95□□□□□ -0.18
SPT16P32558 FPS1YLL043W 2010 nt13.93□□□□□ -0.18
SPT16P32558 SHR5YOL110W 714 nt13.93□□□□□ -0.18
SPT16P32558 RSB1YOR049C 1065 nt13.91□□□□□ -0.18
SPT16P32558 YER088W-BYER088W-B 147 nt13.89□□□□□ -0.19
SPT16P32558 ARE1YCR048W 1833 nt13.78□□□□□ -0.2
SPT16P32558 POA1YBR022W 534 nt13.76□□□□□ -0.21
SPT16P32558 PST2YDR032C 597 nt13.73□□□□□ -0.21
SPT16P32558 YHR049C-AYHR049C-A 297 nt13.62□□□□□ -0.23
SPT16P32558 NVJ2YPR091C 2313 nt13.62□□□□□ -0.23
SPT16P32558 SAH1YER043C 1350 nt13.6□□□□□ -0.23
SPT16P32558 BSC6YOL137W 1494 nt13.59□□□□□ -0.23
SPT16P32558 GAR1YHR089C 618 nt13.58□□□□□ -0.24
SPT16P32558 NME1NME1 340 nt13.57□□□□□ -0.24
SPT16P32558 URN1YPR152C 1398 nt13.57□□□□□ -0.24
SPT16P32558 OPI9YLR338W 858 nt13.5□□□□□ -0.25
SPT16P32558 DEP1YAL013W 1218 nt13.48□□□□□ -0.25
SPT16P32558 PAC11YDR488C 1602 nt13.48□□□□□ -0.25
SPT16P32558 RPN10YHR200W 807 nt13.43□□□□□ -0.26
SPT16P32558 SPT5YML010W 3192 nt13.42□□□□□ -0.26
SPT16P32558 YNL208WYNL208W 600 nt13.34□□□□□ -0.27
SPT16P32558 YKL097CYKL097C 411 nt13.29□□□□□ -0.28
SPT16P32558 SSA4YER103W 1929 nt13.29□□□□□ -0.28
SPT16P32558 BUD23YCR047C 828 nt13.25□□□□□ -0.29
SPT16P32558 TIR1YER011W 765 nt13.13□□□□□ -0.31
SPT16P32558 SHU1YHL006C 453 nt13.12□□□□□ -0.31
SPT16P32558 PUN1YLR414C 792 nt13.11□□□□□ -0.31
SPT16P32558 CSM2YIL132C 642 nt13.08□□□□□ -0.32
SPT16P32558 PTC2YER089C 1395 nt13.07□□□□□ -0.32
SPT16P32558 NAB2YGL122C 1578 nt12.97□□□□□ -0.33
SPT16P32558 YJR018WYJR018W 363 nt12.92□□□□□ -0.34
SPT16P32558 PAU21YOR394W 495 nt12.87□□□□□ -0.35
SPT16P32558 PAU22YPL282C 495 nt12.87□□□□□ -0.35
SPT16P32558 BDF1YLR399C 2061 nt12.84□□□□□ -0.35
SPT16P32558 YAL037C-BYAL037C-B 975 nt12.83□□□□□ -0.36
SPT16P32558 MEP2YNL142W 1500 nt12.82□□□□□ -0.36
SPT16P32558 SRB2YHR041C 633 nt12.77□□□□□ -0.37
SPT16P32558 FIS1YIL065C 468 nt12.75□□□□□ -0.37
SPT16P32558 ARO7YPR060C 771 nt12.74□□□□□ -0.37
SPT16P32558 RPP2BYDR382W 333 nt12.73□□□□□ -0.37
SPT16P32558 YOR139CYOR139C 393 nt12.73□□□□□ -0.37
SPT16P32558 DAL1YIR027C 1383 nt12.69□□□□□ -0.38
SPT16P32558 YJR120WYJR120W 351 nt12.66□□□□□ -0.38
SPT16P32558 FPR4YLR449W 1179 nt12.66□□□□□ -0.38
SPT16P32558 TAT1YBR069C 1860 nt12.65□□□□□ -0.38
SPT16P32558 DCW1YKL046C 1350 nt12.62□□□□□ -0.39
SPT16P32558 WWM1YFL010C 636 nt12.59□□□□□ -0.39
SPT16P32558 PAM17YKR065C 594 nt12.59□□□□□ -0.39
SPT16P32558 RPM1RPM1 483 nt12.59□□□□□ -0.39
SPT16P32558 PHO4YFR034C 939 nt12.58□□□□□ -0.4
SPT16P32558 YGR021WYGR021W 873 nt12.58□□□□□ -0.4
SPT16P32558 HOM6YJR139C 1080 nt12.57□□□□□ -0.4
SPT16P32558 YPS1YLR120C 1710 nt12.56□□□□□ -0.4
SPT16P32558 NPL3YDR432W 1245 nt12.55□□□□□ -0.4
SPT16P32558 INM2YDR287W 879 nt12.53□□□□□ -0.4
SPT16P32558 MNP1YGL068W 585 nt12.52□□□□□ -0.41
SPT16P32558 REG2YBR050C 1017 nt12.48□□□□□ -0.41
SPT16P32558 YHR165W-AYHR165W-A 312 nt12.47□□□□□ -0.41
SPT16P32558 UME6YDR207C 2511 nt12.44□□□□□ -0.42
SPT16P32558 EMI2YDR516C 1503 nt12.42□□□□□ -0.42
SPT16P32558 BDH2YAL061W 1254 nt12.41□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms