Protein–RNA interactions for Protein: P25554

SGF29, SAGA-associated factor 29, yeastyeast

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SGF29P25554 YML009W-BYML009W-B 477 nt21.03■□□□□ 0.96
SGF29P25554 NOP1YDL014W 984 nt20.7■□□□□ 0.9
SGF29P25554 NSR1YGR159C 1245 nt20.53■□□□□ 0.88
SGF29P25554 YKL036CYKL036C 393 nt19.53■□□□□ 0.72
SGF29P25554 YJL027CYJL027C 417 nt18.3■□□□□ 0.52
SGF29P25554 Q0297Q0297 156 nt18.27■□□□□ 0.52
SGF29P25554 SRX1YKL086W 384 nt18.08■□□□□ 0.48
SGF29P25554 SCS3YGL126W 1143 nt18■□□□□ 0.47
SGF29P25554 MDJ1YFL016C 1536 nt17.78■□□□□ 0.44
SGF29P25554 YCR051WYCR051W 669 nt17.15■□□□□ 0.34
SGF29P25554 YOL085CYOL085C 342 nt16.89■□□□□ 0.29
SGF29P25554 SCJ1YMR214W 1134 nt16.63■□□□□ 0.25
SGF29P25554 PKP1YIL042C 1185 nt16.52■□□□□ 0.24
SGF29P25554 RPP1BYDL130W 321 nt16.38■□□□□ 0.21
SGF29P25554 ATS1YAL020C 1002 nt16.24■□□□□ 0.19
SGF29P25554 TRN1tP(UGG)A 72 nt16.05■□□□□ 0.16
SGF29P25554 SUF9tP(UGG)F 72 nt16.05■□□□□ 0.16
SGF29P25554 SUF8tP(UGG)H 72 nt16.05■□□□□ 0.16
SGF29P25554 tP(UGG)LtP(UGG)L 72 nt16.05■□□□□ 0.16
SGF29P25554 SUF7tP(UGG)M 72 nt16.05■□□□□ 0.16
SGF29P25554 tP(UGG)N1tP(UGG)N1 72 nt16.05■□□□□ 0.16
SGF29P25554 tP(UGG)N2tP(UGG)N2 72 nt16.05■□□□□ 0.16
SGF29P25554 tP(UGG)O1tP(UGG)O1 72 nt16.05■□□□□ 0.16
SGF29P25554 SUF11tP(UGG)O2 72 nt16.05■□□□□ 0.16
SGF29P25554 DBP2YNL112W 1641 nt15.88■□□□□ 0.13
SGF29P25554 CCC1YLR220W 969 nt15.84■□□□□ 0.13
SGF29P25554 SCR1SCR1 522 nt15.58■□□□□ 0.08
SGF29P25554 PET122YER153C 765 nt15.57■□□□□ 0.08
SGF29P25554 tP(UGG)O3tP(UGG)O3 72 nt15.33■□□□□ 0.04
SGF29P25554 YBR190WYBR190W 312 nt15.18■□□□□ 0.02
SGF29P25554 RRN5YLR141W 1092 nt15.17■□□□□ 0.02
SGF29P25554 RVS167YDR388W 1449 nt15.09■□□□□ 0.01
SGF29P25554 RTC3YHR087W 336 nt15.04■□□□□ -0
SGF29P25554 RSB1YOR049C 1065 nt14.99□□□□□ -0.01
SGF29P25554 PST2YDR032C 597 nt14.97□□□□□ -0.01
SGF29P25554 YER088W-BYER088W-B 147 nt14.89□□□□□ -0.03
SGF29P25554 YDJ1YNL064C 1230 nt14.87□□□□□ -0.03
SGF29P25554 SHR5YOL110W 714 nt14.67□□□□□ -0.06
SGF29P25554 YKL097CYKL097C 411 nt14.63□□□□□ -0.07
SGF29P25554 GAR1YHR089C 618 nt14.39□□□□□ -0.11
SGF29P25554 SHU1YHL006C 453 nt14.22□□□□□ -0.13
SGF29P25554 DEP1YAL013W 1218 nt14.02□□□□□ -0.17
SGF29P25554 PUT4YOR348C 1884 nt13.98□□□□□ -0.17
SGF29P25554 YNL208WYNL208W 600 nt13.93□□□□□ -0.18
SGF29P25554 YOR139CYOR139C 393 nt13.93□□□□□ -0.18
SGF29P25554 URN1YPR152C 1398 nt13.93□□□□□ -0.18
SGF29P25554 TIR1YER011W 765 nt13.92□□□□□ -0.18
SGF29P25554 RPN10YHR200W 807 nt13.88□□□□□ -0.19
SGF29P25554 YAL037C-BYAL037C-B 975 nt13.81□□□□□ -0.2
SGF29P25554 NPL3YDR432W 1245 nt13.73□□□□□ -0.21
SGF29P25554 SSA3YBL075C 1950 nt13.7□□□□□ -0.22
SGF29P25554 OPI9YLR338W 858 nt13.68□□□□□ -0.22
SGF29P25554 ARE1YCR048W 1833 nt13.67□□□□□ -0.22
SGF29P25554 SAH1YER043C 1350 nt13.63□□□□□ -0.23
SGF29P25554 SSA1YAL005C 1929 nt13.62□□□□□ -0.23
SGF29P25554 POA1YBR022W 534 nt13.54□□□□□ -0.24
SGF29P25554 YHR049C-AYHR049C-A 297 nt13.5□□□□□ -0.25
SGF29P25554 YGR021WYGR021W 873 nt13.49□□□□□ -0.25
SGF29P25554 SRB2YHR041C 633 nt13.45□□□□□ -0.26
SGF29P25554 HOM6YJR139C 1080 nt13.45□□□□□ -0.26
SGF29P25554 YOL037CYOL037C 354 nt13.45□□□□□ -0.26
SGF29P25554 MNP1YGL068W 585 nt13.4□□□□□ -0.26
SGF29P25554 tM(CAU)CtM(CAU)C 72 nt13.37□□□□□ -0.27
SGF29P25554 IMT4tM(CAU)E 72 nt13.37□□□□□ -0.27
SGF29P25554 IMT3tM(CAU)J3 72 nt13.37□□□□□ -0.27
SGF29P25554 IMT1tM(CAU)O1 72 nt13.37□□□□□ -0.27
SGF29P25554 IMT2tM(CAU)P 72 nt13.37□□□□□ -0.27
SGF29P25554 WWM1YFL010C 636 nt13.36□□□□□ -0.27
SGF29P25554 YJR018WYJR018W 363 nt13.32□□□□□ -0.28
SGF29P25554 BSC6YOL137W 1494 nt13.29□□□□□ -0.28
SGF29P25554 PUN1YLR414C 792 nt13.27□□□□□ -0.29
SGF29P25554 RKM5YLR137W 1104 nt13.25□□□□□ -0.29
SGF29P25554 RPP2BYDR382W 333 nt13.22□□□□□ -0.29
SGF29P25554 YJR120WYJR120W 351 nt13.21□□□□□ -0.29
SGF29P25554 YFL021C-AYFL021C-A 855 nt13.19□□□□□ -0.3
SGF29P25554 BUD23YCR047C 828 nt13.17□□□□□ -0.3
SGF29P25554 PTC2YER089C 1395 nt13.12□□□□□ -0.31
SGF29P25554 PUS2YGL063W 1113 nt13.09□□□□□ -0.31
SGF29P25554 YLR281CYLR281C 468 nt13.07□□□□□ -0.32
SGF29P25554 MOT3YMR070W 1473 nt13.04□□□□□ -0.32
SGF29P25554 BDH2YAL061W 1254 nt13.03□□□□□ -0.32
SGF29P25554 Q0182Q0182 405 nt13.01□□□□□ -0.33
SGF29P25554 NAB2YGL122C 1578 nt12.99□□□□□ -0.33
SGF29P25554 LSM3YLR438C-A 270 nt12.98□□□□□ -0.33
SGF29P25554 WHI5YOR083W 888 nt12.94□□□□□ -0.34
SGF29P25554 SPT5YML010W 3192 nt12.88□□□□□ -0.35
SGF29P25554 FIS1YIL065C 468 nt12.85□□□□□ -0.35
SGF29P25554 INM2YDR287W 879 nt12.82□□□□□ -0.36
SGF29P25554 DAL1YIR027C 1383 nt12.78□□□□□ -0.36
SGF29P25554 MRPL8YJL063C 717 nt12.77□□□□□ -0.37
SGF29P25554 FMP45YDL222C 930 nt12.75□□□□□ -0.37
SGF29P25554 FPR4YLR449W 1179 nt12.75□□□□□ -0.37
SGF29P25554 YBL100CYBL100C 315 nt12.75□□□□□ -0.37
SGF29P25554 DSK2YMR276W 1122 nt12.74□□□□□ -0.37
SGF29P25554 IMP2'YIL154C 1041 nt12.72□□□□□ -0.37
SGF29P25554 TRM9YML014W 840 nt12.69□□□□□ -0.38
SGF29P25554 YPR011CYPR011C 981 nt12.69□□□□□ -0.38
SGF29P25554 YCH1YGR203W 447 nt12.68□□□□□ -0.38
SGF29P25554 PHO4YFR034C 939 nt12.67□□□□□ -0.38
SGF29P25554 YLR236CYLR236C 324 nt12.65□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms