RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B MTC1P47018 478 aaKnown RBP4.39□□□□□ -1.71
YGR038C-BYGR038C-B SCT1P32784 759 aa4.02□□□□□ -1.77
YGR038C-BYGR038C-B RQC2Q12532 1038 aaKnown RBP3.99□□□□□ -1.77
YGR038C-BYGR038C-B RSE1Q04693 1361 aaKnown RBP3.93□□□□□ -1.78
YGR038C-BYGR038C-B NAP1P25293 417 aaKnown RBP3.87□□□□□ -1.79
YGR038C-BYGR038C-B NSR1P27476 414 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YGR038C-BYGR038C-B INO80P53115 1489 aa3.85□□□□□ -1.79
YGR038C-BYGR038C-B YTA7P40340 1379 aa3.8□□□□□ -1.8
YGR038C-BYGR038C-B TAF7Q05021 590 aa3.78□□□□□ -1.8
YGR038C-BYGR038C-B URN1Q06525 465 aaKnown RBP3.78□□□□□ -1.8
YGR038C-BYGR038C-B BFR2Q06631 534 aaKnown RBP3.77□□□□□ -1.81
YGR038C-BYGR038C-B RTT106P40161 455 aa3.76□□□□□ -1.81
YGR038C-BYGR038C-B SPA2P23201 1466 aaKnown RBP3.76□□□□□ -1.81
YGR038C-BYGR038C-B ABP1P15891 592 aaKnown RBP3.75□□□□□ -1.81
YGR038C-BYGR038C-B TFA1P36100 482 aa3.74□□□□□ -1.81
YGR038C-BYGR038C-B MIF2P35201 549 aa3.74□□□□□ -1.81
YGR038C-BYGR038C-B SAS10Q12136 610 aaPredicted RBP3.74□□□□□ -1.81
YGR038C-BYGR038C-B DRS1P32892 752 aaKnown RBP3.72□□□□□ -1.81
YGR038C-BYGR038C-B PAF1P38351 445 aa3.72□□□□□ -1.81
YGR038C-BYGR038C-B LEU3P08638 886 aa3.71□□□□□ -1.82
YGR038C-BYGR038C-B ENP1P38333 483 aaKnown RBP3.66□□□□□ -1.82
YGR038C-BYGR038C-B YJL181WP46987 611 aa3.66□□□□□ -1.82
YGR038C-BYGR038C-B POL5P39985 1022 aaKnown RBP3.63□□□□□ -1.83
YGR038C-BYGR038C-B UBP1P25037 809 aa3.63□□□□□ -1.83
YGR038C-BYGR038C-B SIS2P36024 562 aa3.59□□□□□ -1.83
YGR038C-BYGR038C-B MRX12P47084 519 aa3.59□□□□□ -1.83
YGR038C-BYGR038C-B RRT14P40470 206 aa3.59□□□□□ -1.83
YGR038C-BYGR038C-B NOP7P53261 605 aaKnown RBP3.55□□□□□ -1.84
YGR038C-BYGR038C-B IFH1P39520 1085 aa3.55□□□□□ -1.84
YGR038C-BYGR038C-B PRI1P10363 409 aa3.54□□□□□ -1.84
YGR038C-BYGR038C-B NAB3P38996 802 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
YGR038C-BYGR038C-B CLB5P30283 435 aa3.5□□□□□ -1.85
YGR038C-BYGR038C-B PRP40P33203 583 aaKnown RBP3.49□□□□□ -1.85
YGR038C-BYGR038C-B SEN54Q02825 467 aaPredicted RBP3.47□□□□□ -1.85
YGR038C-BYGR038C-B BNR1P40450 1375 aa3.47□□□□□ -1.85
YGR038C-BYGR038C-B PSD2P53037 1138 aaKnown RBP3.46□□□□□ -1.86
YGR038C-BYGR038C-B LEO1P38439 464 aa3.45□□□□□ -1.86
YGR038C-BYGR038C-B TAF2P23255 1407 aa3.45□□□□□ -1.86
YGR038C-BYGR038C-B SUP35P05453 685 aaKnown RBP3.44□□□□□ -1.86
YGR038C-BYGR038C-B KOG1P38873 1557 aa3.44□□□□□ -1.86
YGR038C-BYGR038C-B SGS1P35187 1447 aa3.44□□□□□ -1.86
YGR038C-BYGR038C-B SPT5P27692 1063 aaKnown RBP3.44□□□□□ -1.86
YGR038C-BYGR038C-B YMR196WQ04336 1088 aa3.44□□□□□ -1.86
YGR038C-BYGR038C-B SKI3P17883 1432 aaKnown RBP3.44□□□□□ -1.86
YGR038C-BYGR038C-B STH1P32597 1359 aa3.44□□□□□ -1.86
YGR038C-BYGR038C-B YFR006WP43590 535 aa3.44□□□□□ -1.86
YGR038C-BYGR038C-B TCB3Q03640 1545 aaKnown RBP3.44□□□□□ -1.86
YGR038C-BYGR038C-B DRS2P39524 1355 aa3.43□□□□□ -1.86
YGR038C-BYGR038C-B TAF5P38129 798 aa3.43□□□□□ -1.86
YGR038C-BYGR038C-B ENP2P48234 707 aaKnown RBP3.43□□□□□ -1.86
YGR038C-BYGR038C-B LAM6Q08001 693 aa3.43□□□□□ -1.86
YGR038C-BYGR038C-B TIF4632P39936 914 aaKnown RBP3.43□□□□□ -1.86
YGR038C-BYGR038C-B CKB1P43639 278 aa3.43□□□□□ -1.86
YGR038C-BYGR038C-B YPR148CQ06523 435 aa3.42□□□□□ -1.86
YGR038C-BYGR038C-B BUD4P47136 1447 aa3.42□□□□□ -1.86
YGR038C-BYGR038C-B BUD21Q08492 214 aaPredicted RBP3.42□□□□□ -1.86
YGR038C-BYGR038C-B UGA2P38067 497 aa3.41□□□□□ -1.86
YGR038C-BYGR038C-B RTF1P53064 558 aa3.41□□□□□ -1.86
YGR038C-BYGR038C-B HUL5P53119 910 aa3.41□□□□□ -1.86
YGR038C-BYGR038C-B SWR1Q05471 1514 aa3.41□□□□□ -1.86
YGR038C-BYGR038C-B AVT3P36062 692 aa3.4□□□□□ -1.86
YGR038C-BYGR038C-B FPR3P38911 411 aaKnown RBP3.4□□□□□ -1.87
YGR038C-BYGR038C-B SAP155P43612 1002 aa3.39□□□□□ -1.87
YGR038C-BYGR038C-B NOP8Q08287 484 aaPredicted RBP3.39□□□□□ -1.87
YGR038C-BYGR038C-B CSE1P33307 960 aa3.38□□□□□ -1.87
YGR038C-BYGR038C-B SPT7P35177 1332 aa3.37□□□□□ -1.87
YGR038C-BYGR038C-B MEC3Q02574 474 aa3.37□□□□□ -1.87
YGR038C-BYGR038C-B TRM732Q03496 1420 aa3.37□□□□□ -1.87
YGR038C-BYGR038C-B SMC4Q12267 1418 aa3.37□□□□□ -1.87
YGR038C-BYGR038C-B SVF1Q05515 481 aa3.36□□□□□ -1.87
YGR038C-BYGR038C-B MET10P39692 1035 aa3.36□□□□□ -1.87
YGR038C-BYGR038C-B ALD3P54114 506 aa3.36□□□□□ -1.87
YGR038C-BYGR038C-B HPC2Q01448 625 aa3.36□□□□□ -1.87
YGR038C-BYGR038C-B FUN12P39730 1002 aaKnown RBP3.35□□□□□ -1.87
YGR038C-BYGR038C-B AIM7Q12156 149 aa3.35□□□□□ -1.87
YGR038C-BYGR038C-B FPR4Q06205 392 aaPredicted RBP3.35□□□□□ -1.87
YGR038C-BYGR038C-B RPS9BP05755 195 aaKnown RBP3.35□□□□□ -1.87
YGR038C-BYGR038C-B TPM1P17536 199 aaKnown RBP3.35□□□□□ -1.87
YGR038C-BYGR038C-B ALD2P47771 506 aa3.34□□□□□ -1.87
YGR038C-BYGR038C-B GEA2P39993 1459 aaKnown RBP3.33□□□□□ -1.88
YGR038C-BYGR038C-B RPP2BP02400 110 aaKnown RBP3.33□□□□□ -1.88
YGR038C-BYGR038C-B YAF9P53930 226 aa3.32□□□□□ -1.88
YGR038C-BYGR038C-B KEX1P09620 729 aa3.32□□□□□ -1.88
YGR038C-BYGR038C-B SPT6P23615 1451 aaKnown RBP3.31□□□□□ -1.88
YGR038C-BYGR038C-B SEC20P28791 383 aa3.31□□□□□ -1.88
YGR038C-BYGR038C-B IRC3Q06683 689 aa3.31□□□□□ -1.88
YGR038C-BYGR038C-B MMS1Q06211 1407 aa3.31□□□□□ -1.88
YGR038C-BYGR038C-B CHZ1P40019 153 aaPredicted RBP3.3□□□□□ -1.88
YGR038C-BYGR038C-B YFR016CP43597 1233 aaKnown RBP3.3□□□□□ -1.88
YGR038C-BYGR038C-B COG8Q04632 607 aa3.3□□□□□ -1.88
YGR038C-BYGR038C-B DAL5P15365 543 aa3.3□□□□□ -1.88
YGR038C-BYGR038C-B MDG1P53885 366 aa3.3□□□□□ -1.88
YGR038C-BYGR038C-B YEF3P16521 1044 aaKnown RBP3.29□□□□□ -1.88
YGR038C-BYGR038C-B PAP2P53632 584 aaKnown RBP3.29□□□□□ -1.88
YGR038C-BYGR038C-B ATG13Q06628 738 aa3.29□□□□□ -1.88
YGR038C-BYGR038C-B BRE1Q07457 700 aaKnown RBP3.29□□□□□ -1.88
YGR038C-BYGR038C-B RSC30P38781 883 aa3.29□□□□□ -1.88
YGR038C-BYGR038C-B ZDS2P54786 942 aa3.28□□□□□ -1.88
YGR038C-BYGR038C-B LTE1P07866 1435 aa3.28□□□□□ -1.88
YGR038C-BYGR038C-B ENV9Q08651 330 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms