Protein–RNA interactions for Protein: P0CX84

RPL35A, 60S ribosomal protein L35-A, yeastyeast

Known RBP Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL35AP0CX84 YML009W-BYML009W-B 477 nt17.76■□□□□ 0.43
RPL35AP0CX84 NSR1YGR159C 1245 nt17.72■□□□□ 0.43
RPL35AP0CX84 NOP1YDL014W 984 nt17.44■□□□□ 0.38
RPL35AP0CX84 YKL036CYKL036C 393 nt16.09■□□□□ 0.17
RPL35AP0CX84 MDJ1YFL016C 1536 nt15.48■□□□□ 0.07
RPL35AP0CX84 Q0297Q0297 156 nt15.26■□□□□ 0.03
RPL35AP0CX84 SRX1YKL086W 384 nt15.19■□□□□ 0.02
RPL35AP0CX84 YJL027CYJL027C 417 nt15□□□□□ -0.01
RPL35AP0CX84 SCS3YGL126W 1143 nt14.6□□□□□ -0.07
RPL35AP0CX84 YCR051WYCR051W 669 nt14.35□□□□□ -0.11
RPL35AP0CX84 YOL085CYOL085C 342 nt13.89□□□□□ -0.19
RPL35AP0CX84 DBP2YNL112W 1641 nt13.76□□□□□ -0.21
RPL35AP0CX84 RPP1BYDL130W 321 nt13.66□□□□□ -0.22
RPL35AP0CX84 TRN1tP(UGG)A 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 SUF9tP(UGG)F 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 SUF8tP(UGG)H 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 tP(UGG)LtP(UGG)L 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 SUF7tP(UGG)M 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 tP(UGG)N1tP(UGG)N1 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 tP(UGG)N2tP(UGG)N2 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 tP(UGG)O1tP(UGG)O1 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 SUF11tP(UGG)O2 72 nt13.66□□□□□ -0.22
RPL35AP0CX84 PKP1YIL042C 1185 nt13.57□□□□□ -0.24
RPL35AP0CX84 CCC1YLR220W 969 nt13.44□□□□□ -0.26
RPL35AP0CX84 YBR190WYBR190W 312 nt13.34□□□□□ -0.27
RPL35AP0CX84 SCJ1YMR214W 1134 nt13.19□□□□□ -0.3
RPL35AP0CX84 ATS1YAL020C 1002 nt13.12□□□□□ -0.31
RPL35AP0CX84 RVS167YDR388W 1449 nt13.09□□□□□ -0.31
RPL35AP0CX84 RTC3YHR087W 336 nt12.97□□□□□ -0.33
RPL35AP0CX84 SCR1SCR1 522 nt12.97□□□□□ -0.33
RPL35AP0CX84 PET122YER153C 765 nt12.96□□□□□ -0.33
RPL35AP0CX84 tP(UGG)O3tP(UGG)O3 72 nt12.94□□□□□ -0.34
RPL35AP0CX84 RRN5YLR141W 1092 nt12.63□□□□□ -0.39
RPL35AP0CX84 SHR5YOL110W 714 nt12.62□□□□□ -0.39
RPL35AP0CX84 YDJ1YNL064C 1230 nt12.59□□□□□ -0.39
RPL35AP0CX84 RSB1YOR049C 1065 nt12.39□□□□□ -0.43
RPL35AP0CX84 YER088W-BYER088W-B 147 nt12.38□□□□□ -0.43
RPL35AP0CX84 SSA3YBL075C 1950 nt12.22□□□□□ -0.45
RPL35AP0CX84 GAR1YHR089C 618 nt12.19□□□□□ -0.46
RPL35AP0CX84 URN1YPR152C 1398 nt12.17□□□□□ -0.46
RPL35AP0CX84 PST2YDR032C 597 nt12.15□□□□□ -0.46
RPL35AP0CX84 RPN10YHR200W 807 nt12.12□□□□□ -0.47
RPL35AP0CX84 DEP1YAL013W 1218 nt12.1□□□□□ -0.47
RPL35AP0CX84 YNL208WYNL208W 600 nt12.06□□□□□ -0.48
RPL35AP0CX84 OPI9YLR338W 858 nt12.03□□□□□ -0.48
RPL35AP0CX84 PUT4YOR348C 1884 nt11.97□□□□□ -0.49
RPL35AP0CX84 SAH1YER043C 1350 nt11.84□□□□□ -0.51
RPL35AP0CX84 TIR1YER011W 765 nt11.81□□□□□ -0.52
RPL35AP0CX84 ARE1YCR048W 1833 nt11.76□□□□□ -0.53
RPL35AP0CX84 PUN1YLR414C 792 nt11.72□□□□□ -0.53
RPL35AP0CX84 YKL097CYKL097C 411 nt11.71□□□□□ -0.53
RPL35AP0CX84 YJR018WYJR018W 363 nt11.65□□□□□ -0.54
RPL35AP0CX84 YHR049C-AYHR049C-A 297 nt11.6□□□□□ -0.55
RPL35AP0CX84 SSA1YAL005C 1929 nt11.6□□□□□ -0.55
RPL35AP0CX84 POA1YBR022W 534 nt11.58□□□□□ -0.56
RPL35AP0CX84 SHU1YHL006C 453 nt11.57□□□□□ -0.56
RPL35AP0CX84 RPP2BYDR382W 333 nt11.49□□□□□ -0.57
RPL35AP0CX84 PTC2YER089C 1395 nt11.47□□□□□ -0.57
RPL35AP0CX84 NAB2YGL122C 1578 nt11.37□□□□□ -0.59
RPL35AP0CX84 YJR120WYJR120W 351 nt11.37□□□□□ -0.59
RPL35AP0CX84 BUD23YCR047C 828 nt11.34□□□□□ -0.59
RPL35AP0CX84 YGR021WYGR021W 873 nt11.34□□□□□ -0.59
RPL35AP0CX84 BSC6YOL137W 1494 nt11.32□□□□□ -0.6
RPL35AP0CX84 INM2YDR287W 879 nt11.3□□□□□ -0.6
RPL35AP0CX84 SRB2YHR041C 633 nt11.3□□□□□ -0.6
RPL35AP0CX84 YAL037C-BYAL037C-B 975 nt11.3□□□□□ -0.6
RPL35AP0CX84 WWM1YFL010C 636 nt11.25□□□□□ -0.61
RPL35AP0CX84 BDH2YAL061W 1254 nt11.24□□□□□ -0.61
RPL35AP0CX84 DAL1YIR027C 1383 nt11.22□□□□□ -0.61
RPL35AP0CX84 HOM6YJR139C 1080 nt11.22□□□□□ -0.61
RPL35AP0CX84 YFL021C-AYFL021C-A 855 nt11.18□□□□□ -0.62
RPL35AP0CX84 LSM3YLR438C-A 270 nt11.16□□□□□ -0.62
RPL35AP0CX84 YOR139CYOR139C 393 nt11.15□□□□□ -0.62
RPL35AP0CX84 NPL3YDR432W 1245 nt11.13□□□□□ -0.63
RPL35AP0CX84 FIS1YIL065C 468 nt11.13□□□□□ -0.63
RPL35AP0CX84 FPR4YLR449W 1179 nt11.12□□□□□ -0.63
RPL35AP0CX84 YBL100CYBL100C 315 nt11.11□□□□□ -0.63
RPL35AP0CX84 FPS1YLL043W 2010 nt11.09□□□□□ -0.63
RPL35AP0CX84 YOL037CYOL037C 354 nt11.09□□□□□ -0.63
RPL35AP0CX84 MNP1YGL068W 585 nt11.08□□□□□ -0.64
RPL35AP0CX84 PHO4YFR034C 939 nt11.07□□□□□ -0.64
RPL35AP0CX84 RKM5YLR137W 1104 nt11.06□□□□□ -0.64
RPL35AP0CX84 TRM9YML014W 840 nt11.03□□□□□ -0.64
RPL35AP0CX84 FUN26YAL022C 1554 nt10.98□□□□□ -0.65
RPL35AP0CX84 CCT6YDR188W 1641 nt10.91□□□□□ -0.66
RPL35AP0CX84 NVJ2YPR091C 2313 nt10.86□□□□□ -0.67
RPL35AP0CX84 SUF2tP(AGG)C 72 nt10.86□□□□□ -0.67
RPL35AP0CX84 SUF10tP(AGG)N 72 nt10.86□□□□□ -0.67
RPL35AP0CX84 YPS1YLR120C 1710 nt10.85□□□□□ -0.67
RPL35AP0CX84 ALF1YNL148C 765 nt10.85□□□□□ -0.67
RPL35AP0CX84 YDR095CYDR095C 411 nt10.81□□□□□ -0.68
RPL35AP0CX84 YLR281CYLR281C 468 nt10.77□□□□□ -0.69
RPL35AP0CX84 tM(CAU)CtM(CAU)C 72 nt10.76□□□□□ -0.69
RPL35AP0CX84 IMT4tM(CAU)E 72 nt10.76□□□□□ -0.69
RPL35AP0CX84 IMT3tM(CAU)J3 72 nt10.76□□□□□ -0.69
RPL35AP0CX84 IMT1tM(CAU)O1 72 nt10.76□□□□□ -0.69
RPL35AP0CX84 IMT2tM(CAU)P 72 nt10.76□□□□□ -0.69
RPL35AP0CX84 SPT5YML010W 3192 nt10.73□□□□□ -0.69
RPL35AP0CX84 YHR165W-AYHR165W-A 312 nt10.72□□□□□ -0.69
RPL35AP0CX84 WHI5YOR083W 888 nt10.71□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms