RNA–Protein interactions for RNA: YOL072W

THP1, Transcript of Nuclear pore-associated protein, yeast

Gene THP1, Length 1,368 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THP1	YOL072W	ACE2	P21192	770 aa		5.74	□□□□□ -1.49
THP1	YOL072W	MAK31	P23059	88 aa		5.74	□□□□□ -1.49
THP1	YOL072W	BMH2	P34730	273 aa	Known RBP	5.74	□□□□□ -1.49
THP1	YOL072W	MAL31	P38156	614 aa		5.74	□□□□□ -1.49
THP1	YOL072W	RKM3	P38222	552 aa		5.74	□□□□□ -1.49
THP1	YOL072W	SHC1	P39000	512 aa		5.74	□□□□□ -1.49
THP1	YOL072W	VPS8	P39702	1274 aa		5.74	□□□□□ -1.49
THP1	YOL072W	KRE33	P53914	1056 aa	Known RBP	5.74	□□□□□ -1.49
THP1	YOL072W	VMS1	Q04311	632 aa	Known RBP	5.74	□□□□□ -1.49
THP1	YOL072W	LCD1	Q04377	747 aa		5.74	□□□□□ -1.49
THP1	YOL072W	SGD1	Q06132	899 aa		5.74	□□□□□ -1.49
THP1	YOL072W	RAD59	Q12223	238 aa		5.74	□□□□□ -1.49
THP1	YOL072W	TRS33	Q99394	268 aa		5.74	□□□□□ -1.49
THP1	YOL072W	HXK1	P04806	485 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	CDC6	P09119	513 aa		5.73	□□□□□ -1.49
THP1	YOL072W	PGI1	P12709	554 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	RGP1	P16664	663 aa		5.73	□□□□□ -1.49
THP1	YOL072W	CBP3	P21560	335 aa		5.73	□□□□□ -1.49
THP1	YOL072W	RNR3	P21672	869 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	BIO2	P32451	375 aa		5.73	□□□□□ -1.49
THP1	YOL072W	ALG2	P43636	503 aa		5.73	□□□□□ -1.49
THP1	YOL072W	TRM44	Q02648	567 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	ETT1	Q08421	412 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	DDP1	Q99321	188 aa	Known RBP	5.73	□□□□□ -1.49
THP1	YOL072W	MET6	P05694	767 aa	Known RBP	5.72	□□□□□ -1.49
THP1	YOL072W	GPA1	P08539	472 aa		5.72	□□□□□ -1.49
THP1	YOL072W	VPS1	P21576	704 aa	Known RBP	5.72	□□□□□ -1.49
THP1	YOL072W	SLY41	P22215	453 aa		5.72	□□□□□ -1.49
THP1	YOL072W	STV1	P37296	890 aa		5.72	□□□□□ -1.49
THP1	YOL072W	RXT2	P38255	430 aa		5.72	□□□□□ -1.49
THP1	YOL072W	NPR3	P38742	1146 aa		5.72	□□□□□ -1.49
THP1	YOL072W	YER130C	P39959	443 aa		5.72	□□□□□ -1.49
THP1	YOL072W	PCI8	P40512	444 aa		5.72	□□□□□ -1.49
THP1	YOL072W	VPS4	P52917	437 aa		5.72	□□□□□ -1.49
THP1	YOL072W	RPT6	Q01939	405 aa	Known RBP	5.72	□□□□□ -1.49
THP1	YOL072W	MYO5	Q04439	1219 aa	Known RBP	5.72	□□□□□ -1.49
THP1	YOL072W	PCL8	Q08966	492 aa		5.72	□□□□□ -1.49
THP1	YOL072W	DCS2	Q12123	353 aa		5.72	□□□□□ -1.49
THP1	YOL072W	CIT1	P00890	479 aa		5.71	□□□□□ -1.5
THP1	YOL072W	MSM1	P22438	575 aa		5.71	□□□□□ -1.5
THP1	YOL072W	RPL8B	P29453	256 aa	Known RBP	5.71	□□□□□ -1.5
THP1	YOL072W	GLY1	P37303	387 aa	Known RBP	5.71	□□□□□ -1.5
THP1	YOL072W	YBL036C	P38197	257 aa		5.71	□□□□□ -1.5
THP1	YOL072W	SQS1	P53866	767 aa	Known RBP	5.71	□□□□□ -1.5
THP1	YOL072W	YNL115C	P53925	644 aa		5.71	□□□□□ -1.5
THP1	YOL072W	SSL2	Q00578	843 aa		5.71	□□□□□ -1.5
THP1	YOL072W	GDE1	Q02979	1223 aa		5.71	□□□□□ -1.5
THP1	YOL072W	GIS4	Q04233	774 aa		5.71	□□□□□ -1.5
THP1	YOL072W	CRF1	Q04930	467 aa		5.71	□□□□□ -1.5
THP1	YOL072W	YDR341C	Q05506	607 aa	Known RBP	5.71	□□□□□ -1.5
THP1	YOL072W	ATG20	Q07528	640 aa		5.71	□□□□□ -1.5
THP1	YOL072W	GET3	Q12154	354 aa	Known RBP	5.71	□□□□□ -1.5
THP1	YOL072W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
THP1	YOL072W	PRE8	P23639	250 aa		5.7	□□□□□ -1.5
THP1	YOL072W	CHS3	P29465	1165 aa		5.7	□□□□□ -1.5
THP1	YOL072W	MIC60	P36112	540 aa		5.7	□□□□□ -1.5
THP1	YOL072W	YBL028C	P38202	106 aa		5.7	□□□□□ -1.5
THP1	YOL072W	YPT11	P48559	417 aa		5.7	□□□□□ -1.5
THP1	YOL072W	SCW11	P53189	542 aa		5.7	□□□□□ -1.5
THP1	YOL072W	EIS1	Q05050	843 aa	Known RBP	5.7	□□□□□ -1.5
THP1	YOL072W	HPF1	Q05164	967 aa		5.7	□□□□□ -1.5
THP1	YOL072W	YDL124W	Q07551	312 aa	Known RBP	5.7	□□□□□ -1.5
THP1	YOL072W	NBL1	Q3E7Y6	73 aa		5.7	□□□□□ -1.5
THP1	YOL072W	GSC2	P40989	1895 aa		5.69	□□□□□ -1.5
THP1	YOL072W	RPS9B	P05755	195 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	TAF13	P11747	167 aa		5.69	□□□□□ -1.5
THP1	YOL072W	ATE1	P16639	503 aa		5.69	□□□□□ -1.5
THP1	YOL072W	SRP54	P20424	541 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	SRM1	P21827	482 aa		5.69	□□□□□ -1.5
THP1	YOL072W	ADP1	P25371	1049 aa		5.69	□□□□□ -1.5
THP1	YOL072W	URA1	P28272	314 aa	Predicted RBP	5.69	□□□□□ -1.5
THP1	YOL072W	MCM4	P30665	933 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	SRP40	P32583	406 aa	Predicted RBP	5.69	□□□□□ -1.5
THP1	YOL072W	YKT6	P36015	200 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	RFT1	P38206	574 aa	Predicted RBP	5.69	□□□□□ -1.5
THP1	YOL072W	UTP7	P40055	554 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	FYV10	P40492	516 aa		5.69	□□□□□ -1.5
THP1	YOL072W	MTC3	P53077	123 aa		5.69	□□□□□ -1.5
THP1	YOL072W	FOL1	P53848	824 aa		5.69	□□□□□ -1.5
THP1	YOL072W	NAF1	P53919	492 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	SMD2	Q06217	110 aa	Known RBP	5.69	□□□□□ -1.5
THP1	YOL072W	PMA1	P05030	918 aa	Known RBP	5.68	□□□□□ -1.5
THP1	YOL072W	CBP1	P07252	654 aa		5.68	□□□□□ -1.5
THP1	YOL072W	SES1	P07284	462 aa	Known RBP	5.68	□□□□□ -1.5
THP1	YOL072W	NUC1	P08466	329 aa		5.68	□□□□□ -1.5
THP1	YOL072W	HPR1	P17629	752 aa	Known RBP	5.68	□□□□□ -1.5
THP1	YOL072W	MCM2	P29469	868 aa		5.68	□□□□□ -1.5
THP1	YOL072W	MRPL10	P36520	322 aa		5.68	□□□□□ -1.5
THP1	YOL072W	RRM3	P38766	723 aa		5.68	□□□□□ -1.5
THP1	YOL072W	NOC2	P39744	710 aa	Known RBP	5.68	□□□□□ -1.5
THP1	YOL072W	YIR007W	P40566	764 aa		5.68	□□□□□ -1.5
THP1	YOL072W	NUP85	P46673	744 aa		5.68	□□□□□ -1.5
THP1	YOL072W	FAR11	P53917	953 aa		5.68	□□□□□ -1.5
THP1	YOL072W	YNL108C	P53929	270 aa		5.68	□□□□□ -1.5
THP1	YOL072W	VPS30	Q02948	557 aa		5.68	□□□□□ -1.5
THP1	YOL072W	CLF1	Q12309	687 aa	Predicted RBP	5.68	□□□□□ -1.5
THP1	YOL072W	CEX1	Q12453	761 aa		5.68	□□□□□ -1.5
THP1	YOL072W	PTC5	Q12511	572 aa		5.68	□□□□□ -1.5
THP1	YOL072W	TIF1	P10081	395 aa	Known RBP	5.67	□□□□□ -1.5
THP1	YOL072W	SAM2	P19358	384 aa	Known RBP	5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms