Protein–RNA interactions for Protein: P53925

YNL115C, Uncharacterized vacuolar membrane protein YNL115C, yeastyeast

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL115CP53925 YML009W-BYML009W-B 477 nt22.3■■□□□ 1.16
YNL115CP53925 NOP1YDL014W 984 nt21.87■■□□□ 1.09
YNL115CP53925 NSR1YGR159C 1245 nt21.74■■□□□ 1.07
YNL115CP53925 YKL036CYKL036C 393 nt20.7■□□□□ 0.9
YNL115CP53925 YJL027CYJL027C 417 nt19.39■□□□□ 0.69
YNL115CP53925 Q0297Q0297 156 nt19.38■□□□□ 0.69
YNL115CP53925 SRX1YKL086W 384 nt19.16■□□□□ 0.66
YNL115CP53925 SCS3YGL126W 1143 nt19.13■□□□□ 0.65
YNL115CP53925 MDJ1YFL016C 1536 nt18.83■□□□□ 0.6
YNL115CP53925 YCR051WYCR051W 669 nt18.18■□□□□ 0.5
YNL115CP53925 YOL085CYOL085C 342 nt17.94■□□□□ 0.46
YNL115CP53925 SCJ1YMR214W 1134 nt17.59■□□□□ 0.41
YNL115CP53925 PKP1YIL042C 1185 nt17.58■□□□□ 0.4
YNL115CP53925 RPP1BYDL130W 321 nt17.38■□□□□ 0.37
YNL115CP53925 ATS1YAL020C 1002 nt17.26■□□□□ 0.35
YNL115CP53925 TRN1tP(UGG)A 72 nt17.04■□□□□ 0.32
YNL115CP53925 SUF9tP(UGG)F 72 nt17.04■□□□□ 0.32
YNL115CP53925 SUF8tP(UGG)H 72 nt17.04■□□□□ 0.32
YNL115CP53925 tP(UGG)LtP(UGG)L 72 nt17.04■□□□□ 0.32
YNL115CP53925 SUF7tP(UGG)M 72 nt17.04■□□□□ 0.32
YNL115CP53925 tP(UGG)N1tP(UGG)N1 72 nt17.04■□□□□ 0.32
YNL115CP53925 tP(UGG)N2tP(UGG)N2 72 nt17.04■□□□□ 0.32
YNL115CP53925 tP(UGG)O1tP(UGG)O1 72 nt17.04■□□□□ 0.32
YNL115CP53925 SUF11tP(UGG)O2 72 nt17.04■□□□□ 0.32
YNL115CP53925 DBP2YNL112W 1641 nt16.92■□□□□ 0.3
YNL115CP53925 CCC1YLR220W 969 nt16.81■□□□□ 0.28
YNL115CP53925 PET122YER153C 765 nt16.55■□□□□ 0.24
YNL115CP53925 SCR1SCR1 522 nt16.45■□□□□ 0.22
YNL115CP53925 tP(UGG)O3tP(UGG)O3 72 nt16.28■□□□□ 0.2
YNL115CP53925 RRN5YLR141W 1092 nt16.12■□□□□ 0.17
YNL115CP53925 RTC3YHR087W 336 nt15.97■□□□□ 0.15
YNL115CP53925 PST2YDR032C 597 nt15.92■□□□□ 0.14
YNL115CP53925 YBR190WYBR190W 312 nt15.91■□□□□ 0.14
YNL115CP53925 RVS167YDR388W 1449 nt15.91■□□□□ 0.14
YNL115CP53925 RSB1YOR049C 1065 nt15.9■□□□□ 0.14
YNL115CP53925 YER088W-BYER088W-B 147 nt15.82■□□□□ 0.12
YNL115CP53925 YDJ1YNL064C 1230 nt15.75■□□□□ 0.11
YNL115CP53925 SHR5YOL110W 714 nt15.53■□□□□ 0.08
YNL115CP53925 YKL097CYKL097C 411 nt15.51■□□□□ 0.07
YNL115CP53925 Q0182Q0182 405 nt15.29■□□□□ 0.04
YNL115CP53925 GAR1YHR089C 618 nt15.28■□□□□ 0.04
YNL115CP53925 MOT3YMR070W 1473 nt15.18■□□□□ 0.02
YNL115CP53925 SHU1YHL006C 453 nt15.14■□□□□ 0.01
YNL115CP53925 DEP1YAL013W 1218 nt14.9□□□□□ -0.02
YNL115CP53925 YOR139CYOR139C 393 nt14.86□□□□□ -0.03
YNL115CP53925 URN1YPR152C 1398 nt14.77□□□□□ -0.04
YNL115CP53925 TIR1YER011W 765 nt14.76□□□□□ -0.05
YNL115CP53925 YAL037C-BYAL037C-B 975 nt14.73□□□□□ -0.05
YNL115CP53925 YNL208WYNL208W 600 nt14.73□□□□□ -0.05
YNL115CP53925 SSA3YBL075C 1950 nt14.67□□□□□ -0.06
YNL115CP53925 YGR139WYGR139W 339 nt14.66□□□□□ -0.06
YNL115CP53925 RPN10YHR200W 807 nt14.63□□□□□ -0.07
YNL115CP53925 NPL3YDR432W 1245 nt14.53□□□□□ -0.08
YNL115CP53925 SSA1YAL005C 1929 nt14.51□□□□□ -0.09
YNL115CP53925 OPI9YLR338W 858 nt14.47□□□□□ -0.09
YNL115CP53925 SRB2YHR041C 633 nt14.43□□□□□ -0.1
YNL115CP53925 MNP1YGL068W 585 nt14.28□□□□□ -0.12
YNL115CP53925 HOM6YJR139C 1080 nt14.28□□□□□ -0.12
YNL115CP53925 PUT4YOR348C 1884 nt14.27□□□□□ -0.13
YNL115CP53925 YGR021WYGR021W 873 nt14.26□□□□□ -0.13
YNL115CP53925 SAH1YER043C 1350 nt14.24□□□□□ -0.13
YNL115CP53925 tM(CAU)CtM(CAU)C 72 nt14.23□□□□□ -0.13
YNL115CP53925 IMT4tM(CAU)E 72 nt14.23□□□□□ -0.13
YNL115CP53925 IMT3tM(CAU)J3 72 nt14.23□□□□□ -0.13
YNL115CP53925 IMT1tM(CAU)O1 72 nt14.23□□□□□ -0.13
YNL115CP53925 IMT2tM(CAU)P 72 nt14.23□□□□□ -0.13
YNL115CP53925 YOL037CYOL037C 354 nt14.23□□□□□ -0.13
YNL115CP53925 WWM1YFL010C 636 nt14.21□□□□□ -0.13
YNL115CP53925 YJR018WYJR018W 363 nt14.12□□□□□ -0.15
YNL115CP53925 YJR120WYJR120W 351 nt14.11□□□□□ -0.15
YNL115CP53925 NME1NME1 340 nt14.1□□□□□ -0.15
YNL115CP53925 RKM5YLR137W 1104 nt14.06□□□□□ -0.16
YNL115CP53925 PUN1YLR414C 792 nt14.03□□□□□ -0.16
YNL115CP53925 ARE1YCR048W 1833 nt13.99□□□□□ -0.17
YNL115CP53925 YFL021C-AYFL021C-A 855 nt13.96□□□□□ -0.17
YNL115CP53925 RPP2BYDR382W 333 nt13.93□□□□□ -0.18
YNL115CP53925 YLR281CYLR281C 468 nt13.9□□□□□ -0.18
YNL115CP53925 PUS2YGL063W 1113 nt13.89□□□□□ -0.19
YNL115CP53925 BDH2YAL061W 1254 nt13.8□□□□□ -0.2
YNL115CP53925 POA1YBR022W 534 nt13.8□□□□□ -0.2
YNL115CP53925 PTC2YER089C 1395 nt13.77□□□□□ -0.21
YNL115CP53925 YHR049C-AYHR049C-A 297 nt13.77□□□□□ -0.21
YNL115CP53925 WHI5YOR083W 888 nt13.75□□□□□ -0.21
YNL115CP53925 LSM3YLR438C-A 270 nt13.72□□□□□ -0.21
YNL115CP53925 BSC6YOL137W 1494 nt13.63□□□□□ -0.23
YNL115CP53925 YPR011CYPR011C 981 nt13.59□□□□□ -0.23
YNL115CP53925 INM2YDR287W 879 nt13.54□□□□□ -0.24
YNL115CP53925 FMP45YDL222C 930 nt13.53□□□□□ -0.24
YNL115CP53925 MRPL8YJL063C 717 nt13.52□□□□□ -0.25
YNL115CP53925 NAB2YGL122C 1578 nt13.52□□□□□ -0.25
YNL115CP53925 DSK2YMR276W 1122 nt13.51□□□□□ -0.25
YNL115CP53925 YLR236CYLR236C 324 nt13.5□□□□□ -0.25
YNL115CP53925 YBL100CYBL100C 315 nt13.5□□□□□ -0.25
YNL115CP53925 BUD23YCR047C 828 nt13.46□□□□□ -0.25
YNL115CP53925 DAL1YIR027C 1383 nt13.45□□□□□ -0.26
YNL115CP53925 YCH1YGR203W 447 nt13.45□□□□□ -0.26
YNL115CP53925 FIS1YIL065C 468 nt13.43□□□□□ -0.26
YNL115CP53925 IMP2'YIL154C 1041 nt13.42□□□□□ -0.26
YNL115CP53925 TRM9YML014W 840 nt13.41□□□□□ -0.26
YNL115CP53925 FPR4YLR449W 1179 nt13.38□□□□□ -0.27
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms