Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.76■■■■□ 3.63
SLC4A7Q9Y6M7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.69■■■■□ 3.62
SLC4A7Q9Y6M7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC37.2■■■■□ 3.55
SLC4A7Q9Y6M7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
SLC4A7Q9Y6M7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
SLC4A7Q9Y6M7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.19■■■■□ 3.38
SLC4A7Q9Y6M7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.08■■■■□ 3.37
SLC4A7Q9Y6M7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.97■■■■□ 3.35
SLC4A7Q9Y6M7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.95■■■■□ 3.35
SLC4A7Q9Y6M7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
SLC4A7Q9Y6M7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
SLC4A7Q9Y6M7 AL356512.1-201ENST00000607453 1739 ntBASIC35.81■■■■□ 3.32
SLC4A7Q9Y6M7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.64■■■■□ 3.3
SLC4A7Q9Y6M7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.61■■■■□ 3.29
SLC4A7Q9Y6M7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
SLC4A7Q9Y6M7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
SLC4A7Q9Y6M7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.19■■■■□ 3.22
SLC4A7Q9Y6M7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.15■■■■□ 3.22
SLC4A7Q9Y6M7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.01■■■■□ 3.19
SLC4A7Q9Y6M7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.96■■■■□ 3.19
SLC4A7Q9Y6M7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
SLC4A7Q9Y6M7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
SLC4A7Q9Y6M7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.91■■■■□ 3.18
SLC4A7Q9Y6M7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
SLC4A7Q9Y6M7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
SLC4A7Q9Y6M7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
SLC4A7Q9Y6M7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.64■■■■□ 3.14
SLC4A7Q9Y6M7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.53■■■■□ 3.12
SLC4A7Q9Y6M7 ZNRF2P1-201ENST00000441407 443 ntBASIC34.43■■■■□ 3.1
SLC4A7Q9Y6M7 AC006077.2-201ENST00000623591 457 ntBASIC34.42■■■■□ 3.1
SLC4A7Q9Y6M7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.32■■■■□ 3.08
SLC4A7Q9Y6M7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC34.31■■■■□ 3.08
SLC4A7Q9Y6M7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
SLC4A7Q9Y6M7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.16■■■■□ 3.06
SLC4A7Q9Y6M7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
SLC4A7Q9Y6M7 AC015813.7-201ENST00000623294 581 ntBASIC34.06■■■■□ 3.04
SLC4A7Q9Y6M7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.06■■■■□ 3.04
SLC4A7Q9Y6M7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
SLC4A7Q9Y6M7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.97■■■■□ 3.03
SLC4A7Q9Y6M7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
SLC4A7Q9Y6M7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.57■■■□□ 2.97
SLC4A7Q9Y6M7 AP002365.1-201ENST00000603448 772 ntBASIC33.56■■■□□ 2.96
SLC4A7Q9Y6M7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.53■■■□□ 2.96
SLC4A7Q9Y6M7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.38■■■□□ 2.93
SLC4A7Q9Y6M7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.38■■■□□ 2.93
SLC4A7Q9Y6M7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
SLC4A7Q9Y6M7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.34■■■□□ 2.93
SLC4A7Q9Y6M7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
SLC4A7Q9Y6M7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
SLC4A7Q9Y6M7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.29■■■□□ 2.92
SLC4A7Q9Y6M7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.28■■■□□ 2.92
SLC4A7Q9Y6M7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.28■■■□□ 2.92
SLC4A7Q9Y6M7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
SLC4A7Q9Y6M7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SLC4A7Q9Y6M7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.16■■■□□ 2.9
SLC4A7Q9Y6M7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.15■■■□□ 2.9
SLC4A7Q9Y6M7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.13■■■□□ 2.89
SLC4A7Q9Y6M7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
SLC4A7Q9Y6M7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC33.12■■■□□ 2.89
SLC4A7Q9Y6M7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
SLC4A7Q9Y6M7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.99■■■□□ 2.87
SLC4A7Q9Y6M7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.95■■■□□ 2.87
SLC4A7Q9Y6M7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
SLC4A7Q9Y6M7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
SLC4A7Q9Y6M7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.86■■■□□ 2.85
SLC4A7Q9Y6M7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SLC4A7Q9Y6M7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
SLC4A7Q9Y6M7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.78■■■□□ 2.84
SLC4A7Q9Y6M7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
SLC4A7Q9Y6M7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
SLC4A7Q9Y6M7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
SLC4A7Q9Y6M7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SLC4A7Q9Y6M7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
SLC4A7Q9Y6M7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
SLC4A7Q9Y6M7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SLC4A7Q9Y6M7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SLC4A7Q9Y6M7 DYNLL1-208ENST00000550178 581 ntBASIC32.66■■■□□ 2.82
SLC4A7Q9Y6M7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
SLC4A7Q9Y6M7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
SLC4A7Q9Y6M7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SLC4A7Q9Y6M7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.59■■■□□ 2.81
SLC4A7Q9Y6M7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.56■■■□□ 2.8
SLC4A7Q9Y6M7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SLC4A7Q9Y6M7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SLC4A7Q9Y6M7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.52■■■□□ 2.8
SLC4A7Q9Y6M7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SLC4A7Q9Y6M7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.5■■■□□ 2.79
SLC4A7Q9Y6M7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
SLC4A7Q9Y6M7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
SLC4A7Q9Y6M7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
SLC4A7Q9Y6M7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.4■■■□□ 2.78
SLC4A7Q9Y6M7 AL031258.1-201ENST00000623562 325 ntBASIC32.39■■■□□ 2.78
SLC4A7Q9Y6M7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
SLC4A7Q9Y6M7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
SLC4A7Q9Y6M7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.32■■■□□ 2.76
SLC4A7Q9Y6M7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.3■■■□□ 2.76
SLC4A7Q9Y6M7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.3■■■□□ 2.76
SLC4A7Q9Y6M7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
SLC4A7Q9Y6M7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SLC4A7Q9Y6M7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms