Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC14.96□□□□□ -0.01
MACF1Q9UPN3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
MACF1Q9UPN3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MACF1Q9UPN3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MACF1Q9UPN3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MACF1Q9UPN3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MACF1Q9UPN3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
MACF1Q9UPN3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MACF1Q9UPN3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC14.28□□□□□ -0.12
MACF1Q9UPN3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MACF1Q9UPN3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MACF1Q9UPN3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
MACF1Q9UPN3 ZNRF2P1-201ENST00000441407 443 ntBASIC14.14□□□□□ -0.15
MACF1Q9UPN3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MACF1Q9UPN3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC14.08□□□□□ -0.16
MACF1Q9UPN3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MACF1Q9UPN3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MACF1Q9UPN3 AC006077.2-201ENST00000623591 457 ntBASIC13.97□□□□□ -0.17
MACF1Q9UPN3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
MACF1Q9UPN3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
MACF1Q9UPN3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MACF1Q9UPN3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
MACF1Q9UPN3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MACF1Q9UPN3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC13.8□□□□□ -0.2
MACF1Q9UPN3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC13.79□□□□□ -0.2
MACF1Q9UPN3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC13.79□□□□□ -0.2
MACF1Q9UPN3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC13.76□□□□□ -0.21
MACF1Q9UPN3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MACF1Q9UPN3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
MACF1Q9UPN3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MACF1Q9UPN3 AP002365.1-201ENST00000603448 772 ntBASIC13.72□□□□□ -0.21
MACF1Q9UPN3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC13.71□□□□□ -0.21
MACF1Q9UPN3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MACF1Q9UPN3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
MACF1Q9UPN3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC13.62□□□□□ -0.23
MACF1Q9UPN3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MACF1Q9UPN3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
MACF1Q9UPN3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MACF1Q9UPN3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MACF1Q9UPN3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
MACF1Q9UPN3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
MACF1Q9UPN3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.51□□□□□ -0.25
MACF1Q9UPN3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MACF1Q9UPN3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MACF1Q9UPN3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.48□□□□□ -0.25
MACF1Q9UPN3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC13.48□□□□□ -0.25
MACF1Q9UPN3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MACF1Q9UPN3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
MACF1Q9UPN3 RPS2P35-201ENST00000443417 897 ntBASIC13.41□□□□□ -0.26
MACF1Q9UPN3 AC015813.7-201ENST00000623294 581 ntBASIC13.4□□□□□ -0.26
MACF1Q9UPN3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC13.36□□□□□ -0.27
MACF1Q9UPN3 AL356512.1-201ENST00000607453 1739 ntBASIC13.34□□□□□ -0.27
MACF1Q9UPN3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC13.33□□□□□ -0.28
MACF1Q9UPN3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
MACF1Q9UPN3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
MACF1Q9UPN3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC13.26□□□□□ -0.29
MACF1Q9UPN3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
MACF1Q9UPN3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.25□□□□□ -0.29
MACF1Q9UPN3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC13.21□□□□□ -0.3
MACF1Q9UPN3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC13.19□□□□□ -0.3
MACF1Q9UPN3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
MACF1Q9UPN3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MACF1Q9UPN3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC13.17□□□□□ -0.3
MACF1Q9UPN3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MACF1Q9UPN3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MACF1Q9UPN3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC13.14□□□□□ -0.31
MACF1Q9UPN3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MACF1Q9UPN3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MACF1Q9UPN3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MACF1Q9UPN3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC13.08□□□□□ -0.32
MACF1Q9UPN3 SUZ12P1-203ENST00000578195 985 ntBASIC13.08□□□□□ -0.32
MACF1Q9UPN3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC13.06□□□□□ -0.32
MACF1Q9UPN3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
MACF1Q9UPN3 DYNLL1-208ENST00000550178 581 ntBASIC13.06□□□□□ -0.32
MACF1Q9UPN3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
MACF1Q9UPN3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC13.03□□□□□ -0.32
MACF1Q9UPN3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC13.03□□□□□ -0.32
MACF1Q9UPN3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC13.02□□□□□ -0.32
MACF1Q9UPN3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MACF1Q9UPN3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC13□□□□□ -0.33
MACF1Q9UPN3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
MACF1Q9UPN3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MACF1Q9UPN3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MACF1Q9UPN3 RARRES2P7-201ENST00000567349 469 ntBASIC12.99□□□□□ -0.33
MACF1Q9UPN3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MACF1Q9UPN3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MACF1Q9UPN3 AC097358.2-201ENST00000607541 1159 ntBASIC12.97□□□□□ -0.33
MACF1Q9UPN3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
MACF1Q9UPN3 AC136428.2-201ENST00000563187 214 ntBASIC12.95□□□□□ -0.34
MACF1Q9UPN3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MACF1Q9UPN3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
MACF1Q9UPN3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MACF1Q9UPN3 HLA-V-202ENST00000446817 847 ntBASIC12.91□□□□□ -0.34
MACF1Q9UPN3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
MACF1Q9UPN3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC12.91□□□□□ -0.34
MACF1Q9UPN3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC12.91□□□□□ -0.34
MACF1Q9UPN3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC12.9□□□□□ -0.34
MACF1Q9UPN3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC12.9□□□□□ -0.34
MACF1Q9UPN3 MIR7108-201ENST00000614319 87 ntBASIC12.89□□□□□ -0.35
MACF1Q9UPN3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms