Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC40.24■■■■■ 4.03
ZFYVE28Q9HCC9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC40.19■■■■■ 4.02
ZFYVE28Q9HCC9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC39.68■■■■□ 3.94
ZFYVE28Q9HCC9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
ZFYVE28Q9HCC9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
ZFYVE28Q9HCC9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC38.55■■■■□ 3.76
ZFYVE28Q9HCC9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC38.47■■■■□ 3.75
ZFYVE28Q9HCC9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC38.34■■■■□ 3.73
ZFYVE28Q9HCC9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC38.33■■■■□ 3.73
ZFYVE28Q9HCC9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.23■■■■□ 3.71
ZFYVE28Q9HCC9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
ZFYVE28Q9HCC9 AL356512.1-201ENST00000607453 1739 ntBASIC38.15■■■■□ 3.7
ZFYVE28Q9HCC9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.99■■■■□ 3.67
ZFYVE28Q9HCC9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC37.96■■■■□ 3.67
ZFYVE28Q9HCC9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
ZFYVE28Q9HCC9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
ZFYVE28Q9HCC9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC37.51■■■■□ 3.59
ZFYVE28Q9HCC9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC37.46■■■■□ 3.59
ZFYVE28Q9HCC9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC37.3■■■■□ 3.56
ZFYVE28Q9HCC9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.56
ZFYVE28Q9HCC9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
ZFYVE28Q9HCC9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
ZFYVE28Q9HCC9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC37.2■■■■□ 3.55
ZFYVE28Q9HCC9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC37.1■■■■□ 3.53
ZFYVE28Q9HCC9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC37.08■■■■□ 3.53
ZFYVE28Q9HCC9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
ZFYVE28Q9HCC9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.92■■■■□ 3.5
ZFYVE28Q9HCC9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC36.81■■■■□ 3.48
ZFYVE28Q9HCC9 ZNRF2P1-201ENST00000441407 443 ntBASIC36.73■■■■□ 3.47
ZFYVE28Q9HCC9 AC006077.2-201ENST00000623591 457 ntBASIC36.71■■■■□ 3.47
ZFYVE28Q9HCC9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC36.58■■■■□ 3.45
ZFYVE28Q9HCC9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.56■■■■□ 3.44
ZFYVE28Q9HCC9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
ZFYVE28Q9HCC9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC36.41■■■■□ 3.42
ZFYVE28Q9HCC9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
ZFYVE28Q9HCC9 AC015813.7-201ENST00000623294 581 ntBASIC36.33■■■■□ 3.41
ZFYVE28Q9HCC9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC36.3■■■■□ 3.4
ZFYVE28Q9HCC9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC36.28■■■■□ 3.4
ZFYVE28Q9HCC9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC36.18■■■■□ 3.38
ZFYVE28Q9HCC9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
ZFYVE28Q9HCC9 AP002365.1-201ENST00000603448 772 ntBASIC35.79■■■■□ 3.32
ZFYVE28Q9HCC9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC35.77■■■■□ 3.32
ZFYVE28Q9HCC9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
ZFYVE28Q9HCC9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC35.6■■■■□ 3.29
ZFYVE28Q9HCC9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
ZFYVE28Q9HCC9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
ZFYVE28Q9HCC9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC35.54■■■■□ 3.28
ZFYVE28Q9HCC9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
ZFYVE28Q9HCC9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC35.49■■■■□ 3.27
ZFYVE28Q9HCC9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC35.49■■■■□ 3.27
ZFYVE28Q9HCC9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
ZFYVE28Q9HCC9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.46■■■■□ 3.27
ZFYVE28Q9HCC9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
ZFYVE28Q9HCC9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
ZFYVE28Q9HCC9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC35.35■■■■□ 3.25
ZFYVE28Q9HCC9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC35.34■■■■□ 3.25
ZFYVE28Q9HCC9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
ZFYVE28Q9HCC9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC35.32■■■■□ 3.24
ZFYVE28Q9HCC9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC35.31■■■■□ 3.24
ZFYVE28Q9HCC9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
ZFYVE28Q9HCC9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC35.18■■■■□ 3.22
ZFYVE28Q9HCC9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC35.12■■■■□ 3.21
ZFYVE28Q9HCC9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC35.1■■■■□ 3.21
ZFYVE28Q9HCC9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
ZFYVE28Q9HCC9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC35.04■■■■□ 3.2
ZFYVE28Q9HCC9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
ZFYVE28Q9HCC9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC34.94■■■■□ 3.18
ZFYVE28Q9HCC9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.93■■■■□ 3.18
ZFYVE28Q9HCC9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
ZFYVE28Q9HCC9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
ZFYVE28Q9HCC9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ZFYVE28Q9HCC9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ZFYVE28Q9HCC9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
ZFYVE28Q9HCC9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
ZFYVE28Q9HCC9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC34.81■■■■□ 3.16
ZFYVE28Q9HCC9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ZFYVE28Q9HCC9 DYNLL1-208ENST00000550178 581 ntBASIC34.81■■■■□ 3.16
ZFYVE28Q9HCC9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
ZFYVE28Q9HCC9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC34.75■■■■□ 3.15
ZFYVE28Q9HCC9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
ZFYVE28Q9HCC9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC34.71■■■■□ 3.15
ZFYVE28Q9HCC9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
ZFYVE28Q9HCC9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
ZFYVE28Q9HCC9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC34.66■■■■□ 3.14
ZFYVE28Q9HCC9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
ZFYVE28Q9HCC9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC34.65■■■■□ 3.14
ZFYVE28Q9HCC9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
ZFYVE28Q9HCC9 AL031258.1-201ENST00000623562 325 ntBASIC34.54■■■■□ 3.12
ZFYVE28Q9HCC9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
ZFYVE28Q9HCC9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
ZFYVE28Q9HCC9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
ZFYVE28Q9HCC9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.48■■■■□ 3.11
ZFYVE28Q9HCC9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC34.47■■■■□ 3.11
ZFYVE28Q9HCC9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC34.45■■■■□ 3.11
ZFYVE28Q9HCC9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.44■■■■□ 3.1
ZFYVE28Q9HCC9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.44■■■■□ 3.1
ZFYVE28Q9HCC9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
ZFYVE28Q9HCC9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ZFYVE28Q9HCC9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC34.39■■■■□ 3.1
ZFYVE28Q9HCC9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC34.39■■■■□ 3.1
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms