Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC44.88■■■■■ 4.78
SPON1Q9HCB6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC44.45■■■■■ 4.71
SPON1Q9HCB6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC44.08■■■■■ 4.65
SPON1Q9HCB6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC43.27■■■■■ 4.52
SPON1Q9HCB6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC43.24■■■■■ 4.51
SPON1Q9HCB6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC43.03■■■■■ 4.48
SPON1Q9HCB6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC42.97■■■■■ 4.47
SPON1Q9HCB6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC42.84■■■■■ 4.45
SPON1Q9HCB6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC42.78■■■■■ 4.44
SPON1Q9HCB6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC42.56■■■■■ 4.4
SPON1Q9HCB6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC42.25■■■■■ 4.35
SPON1Q9HCB6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC42.22■■■■■ 4.35
SPON1Q9HCB6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC42.13■■■■■ 4.33
SPON1Q9HCB6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC41.95■■■■■ 4.31
SPON1Q9HCB6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
SPON1Q9HCB6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC41.9■■■■■ 4.3
SPON1Q9HCB6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
SPON1Q9HCB6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC41.67■■■■■ 4.26
SPON1Q9HCB6 AL356512.1-201ENST00000607453 1739 ntBASIC41.52■■■■■ 4.24
SPON1Q9HCB6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC41.5■■■■■ 4.23
SPON1Q9HCB6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
SPON1Q9HCB6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC41.47■■■■■ 4.23
SPON1Q9HCB6 ZNRF2P1-201ENST00000441407 443 ntBASIC41.41■■■■■ 4.22
SPON1Q9HCB6 AC006077.2-201ENST00000623591 457 ntBASIC41.27■■■■■ 4.2
SPON1Q9HCB6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC41.25■■■■■ 4.19
SPON1Q9HCB6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC41.2■■■■■ 4.19
SPON1Q9HCB6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC41.19■■■■■ 4.18
SPON1Q9HCB6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC41.12■■■■■ 4.17
SPON1Q9HCB6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC40.99■■■■■ 4.15
SPON1Q9HCB6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC40.99■■■■■ 4.15
SPON1Q9HCB6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC40.76■■■■■ 4.12
SPON1Q9HCB6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC40.63■■■■■ 4.09
SPON1Q9HCB6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC40.45■■■■■ 4.07
SPON1Q9HCB6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC40.4■■■■■ 4.06
SPON1Q9HCB6 AC015813.7-201ENST00000623294 581 ntBASIC40.34■■■■■ 4.05
SPON1Q9HCB6 AP002365.1-201ENST00000603448 772 ntBASIC40.33■■■■■ 4.05
SPON1Q9HCB6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC40.3■■■■■ 4.04
SPON1Q9HCB6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC40.08■■■■■ 4.01
SPON1Q9HCB6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC40.08■■■■■ 4.01
SPON1Q9HCB6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC39.96■■■■□ 3.99
SPON1Q9HCB6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC39.91■■■■□ 3.98
SPON1Q9HCB6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC39.9■■■■□ 3.98
SPON1Q9HCB6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC39.76■■■■□ 3.96
SPON1Q9HCB6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC39.74■■■■□ 3.95
SPON1Q9HCB6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC39.73■■■■□ 3.95
SPON1Q9HCB6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC39.72■■■■□ 3.95
SPON1Q9HCB6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
SPON1Q9HCB6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC39.65■■■■□ 3.94
SPON1Q9HCB6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC39.6■■■■□ 3.93
SPON1Q9HCB6 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC39.59■■■■□ 3.93
SPON1Q9HCB6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
SPON1Q9HCB6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC39.42■■■■□ 3.9
SPON1Q9HCB6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC39.42■■■■□ 3.9
SPON1Q9HCB6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
SPON1Q9HCB6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
SPON1Q9HCB6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC39.28■■■■□ 3.88
SPON1Q9HCB6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
SPON1Q9HCB6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
SPON1Q9HCB6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC39.16■■■■□ 3.86
SPON1Q9HCB6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
SPON1Q9HCB6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC39.11■■■■□ 3.85
SPON1Q9HCB6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
SPON1Q9HCB6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC39.09■■■■□ 3.85
SPON1Q9HCB6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC39.07■■■■□ 3.85
SPON1Q9HCB6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC39.03■■■■□ 3.84
SPON1Q9HCB6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC39.02■■■■□ 3.84
SPON1Q9HCB6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC38.99■■■■□ 3.83
SPON1Q9HCB6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC38.98■■■■□ 3.83
SPON1Q9HCB6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC38.95■■■■□ 3.83
SPON1Q9HCB6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC38.95■■■■□ 3.83
SPON1Q9HCB6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC38.94■■■■□ 3.82
SPON1Q9HCB6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC38.92■■■■□ 3.82
SPON1Q9HCB6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SPON1Q9HCB6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.91■■■■□ 3.82
SPON1Q9HCB6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC38.91■■■■□ 3.82
SPON1Q9HCB6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC38.9■■■■□ 3.82
SPON1Q9HCB6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
SPON1Q9HCB6 DYNLL1-208ENST00000550178 581 ntBASIC38.79■■■■□ 3.8
SPON1Q9HCB6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.77■■■■□ 3.8
SPON1Q9HCB6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
SPON1Q9HCB6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC38.75■■■■□ 3.79
SPON1Q9HCB6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC38.71■■■■□ 3.79
SPON1Q9HCB6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC38.7■■■■□ 3.79
SPON1Q9HCB6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC38.68■■■■□ 3.78
SPON1Q9HCB6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC38.68■■■■□ 3.78
SPON1Q9HCB6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
SPON1Q9HCB6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
SPON1Q9HCB6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
SPON1Q9HCB6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
SPON1Q9HCB6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC38.61■■■■□ 3.77
SPON1Q9HCB6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
SPON1Q9HCB6 RPS2P35-201ENST00000443417 897 ntBASIC38.52■■■■□ 3.76
SPON1Q9HCB6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC38.51■■■■□ 3.76
SPON1Q9HCB6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
SPON1Q9HCB6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC38.5■■■■□ 3.75
SPON1Q9HCB6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC38.5■■■■□ 3.75
SPON1Q9HCB6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC38.48■■■■□ 3.75
SPON1Q9HCB6 AL031258.1-201ENST00000623562 325 ntBASIC38.47■■■■□ 3.75
SPON1Q9HCB6 RARRES2P7-201ENST00000567349 469 ntBASIC38.43■■■■□ 3.74
SPON1Q9HCB6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms