Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC11.15□□□□□ -0.62
HMCN1Q96RW7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
HMCN1Q96RW7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HMCN1Q96RW7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HMCN1Q96RW7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
HMCN1Q96RW7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
HMCN1Q96RW7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
HMCN1Q96RW7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
HMCN1Q96RW7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC10.58□□□□□ -0.72
HMCN1Q96RW7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
HMCN1Q96RW7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
HMCN1Q96RW7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
HMCN1Q96RW7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC10.45□□□□□ -0.74
HMCN1Q96RW7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
HMCN1Q96RW7 ZNRF2P1-201ENST00000441407 443 ntBASIC10.43□□□□□ -0.74
HMCN1Q96RW7 AC006077.2-201ENST00000623591 457 ntBASIC10.36□□□□□ -0.75
HMCN1Q96RW7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
HMCN1Q96RW7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
HMCN1Q96RW7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC10.32□□□□□ -0.76
HMCN1Q96RW7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
HMCN1Q96RW7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
HMCN1Q96RW7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
HMCN1Q96RW7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC10.26□□□□□ -0.77
HMCN1Q96RW7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.25□□□□□ -0.77
HMCN1Q96RW7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
HMCN1Q96RW7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
HMCN1Q96RW7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC10.21□□□□□ -0.78
HMCN1Q96RW7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC10.2□□□□□ -0.78
HMCN1Q96RW7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
HMCN1Q96RW7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
HMCN1Q96RW7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
HMCN1Q96RW7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
HMCN1Q96RW7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC10.12□□□□□ -0.79
HMCN1Q96RW7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
HMCN1Q96RW7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
HMCN1Q96RW7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
HMCN1Q96RW7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
HMCN1Q96RW7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC10.08□□□□□ -0.8
HMCN1Q96RW7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
HMCN1Q96RW7 AP002365.1-201ENST00000603448 772 ntBASIC10.07□□□□□ -0.8
HMCN1Q96RW7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC10.05□□□□□ -0.8
HMCN1Q96RW7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
HMCN1Q96RW7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
HMCN1Q96RW7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC9.97□□□□□ -0.81
HMCN1Q96RW7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC9.96□□□□□ -0.81
HMCN1Q96RW7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
HMCN1Q96RW7 AL356512.1-201ENST00000607453 1739 ntBASIC9.94□□□□□ -0.82
HMCN1Q96RW7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
HMCN1Q96RW7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC9.93□□□□□ -0.82
HMCN1Q96RW7 RPS2P35-201ENST00000443417 897 ntBASIC9.9□□□□□ -0.82
HMCN1Q96RW7 AC015813.7-201ENST00000623294 581 ntBASIC9.88□□□□□ -0.83
HMCN1Q96RW7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
HMCN1Q96RW7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC9.86□□□□□ -0.83
HMCN1Q96RW7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC9.86□□□□□ -0.83
HMCN1Q96RW7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
HMCN1Q96RW7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
HMCN1Q96RW7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC9.82□□□□□ -0.84
HMCN1Q96RW7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC9.82□□□□□ -0.84
HMCN1Q96RW7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC9.81□□□□□ -0.84
HMCN1Q96RW7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC9.81□□□□□ -0.84
HMCN1Q96RW7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC9.81□□□□□ -0.84
HMCN1Q96RW7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
HMCN1Q96RW7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
HMCN1Q96RW7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HMCN1Q96RW7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
HMCN1Q96RW7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC9.76□□□□□ -0.85
HMCN1Q96RW7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC9.74□□□□□ -0.85
HMCN1Q96RW7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
HMCN1Q96RW7 RARRES2P7-201ENST00000567349 469 ntBASIC9.72□□□□□ -0.85
HMCN1Q96RW7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
HMCN1Q96RW7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
HMCN1Q96RW7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC9.69□□□□□ -0.86
HMCN1Q96RW7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC9.68□□□□□ -0.86
HMCN1Q96RW7 HLA-V-202ENST00000446817 847 ntBASIC9.67□□□□□ -0.86
HMCN1Q96RW7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
HMCN1Q96RW7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
HMCN1Q96RW7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
HMCN1Q96RW7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC9.65□□□□□ -0.86
HMCN1Q96RW7 SUZ12P1-203ENST00000578195 985 ntBASIC9.65□□□□□ -0.86
HMCN1Q96RW7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.87
HMCN1Q96RW7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HMCN1Q96RW7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HMCN1Q96RW7 DYNLL1-208ENST00000550178 581 ntBASIC9.64□□□□□ -0.87
HMCN1Q96RW7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HMCN1Q96RW7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HMCN1Q96RW7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HMCN1Q96RW7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
HMCN1Q96RW7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC9.62□□□□□ -0.87
HMCN1Q96RW7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC9.61□□□□□ -0.87
HMCN1Q96RW7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
HMCN1Q96RW7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
HMCN1Q96RW7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
HMCN1Q96RW7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
HMCN1Q96RW7 AC136428.2-201ENST00000563187 214 ntBASIC9.57□□□□□ -0.88
HMCN1Q96RW7 AC097358.2-201ENST00000607541 1159 ntBASIC9.56□□□□□ -0.88
HMCN1Q96RW7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC9.55□□□□□ -0.88
HMCN1Q96RW7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC9.55□□□□□ -0.88
HMCN1Q96RW7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC9.55□□□□□ -0.88
HMCN1Q96RW7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC9.55□□□□□ -0.88
HMCN1Q96RW7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms