Protein–RNA interactions for Protein: Q96P71

NECAB3, N-terminal EF-hand calcium-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3Q96P71 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.56■■■■□ 3.44
NECAB3Q96P71 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.24■■■■□ 3.39
NECAB3Q96P71 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.04■■■■□ 3.36
NECAB3Q96P71 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
NECAB3Q96P71 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
NECAB3Q96P71 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
NECAB3Q96P71 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
NECAB3Q96P71 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
NECAB3Q96P71 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.92■■■■□ 3.18
NECAB3Q96P71 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
NECAB3Q96P71 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.53■■■■□ 3.12
NECAB3Q96P71 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.46■■■■□ 3.11
NECAB3Q96P71 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
NECAB3Q96P71 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.3■■■■□ 3.08
NECAB3Q96P71 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
NECAB3Q96P71 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
NECAB3Q96P71 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
NECAB3Q96P71 AL356512.1-201ENST00000607453 1739 ntBASIC33.93■■■■□ 3.02
NECAB3Q96P71 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
NECAB3Q96P71 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
NECAB3Q96P71 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.91■■■■□ 3.02
NECAB3Q96P71 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.91■■■■□ 3.02
NECAB3Q96P71 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
NECAB3Q96P71 ZNRF2P1-201ENST00000441407 443 ntBASIC33.75■■■□□ 2.99
NECAB3Q96P71 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.75■■■□□ 2.99
NECAB3Q96P71 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.68■■■□□ 2.98
NECAB3Q96P71 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
NECAB3Q96P71 AC006077.2-201ENST00000623591 457 ntBASIC33.59■■■□□ 2.97
NECAB3Q96P71 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.49■■■□□ 2.95
NECAB3Q96P71 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.48■■■□□ 2.95
NECAB3Q96P71 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
NECAB3Q96P71 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.13■■■□□ 2.89
NECAB3Q96P71 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.08■■■□□ 2.89
NECAB3Q96P71 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.03■■■□□ 2.88
NECAB3Q96P71 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
NECAB3Q96P71 AC015813.7-201ENST00000623294 581 ntBASIC32.93■■■□□ 2.86
NECAB3Q96P71 AP002365.1-201ENST00000603448 772 ntBASIC32.9■■■□□ 2.86
NECAB3Q96P71 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.76■■■□□ 2.83
NECAB3Q96P71 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
NECAB3Q96P71 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.62■■■□□ 2.81
NECAB3Q96P71 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.62■■■□□ 2.81
NECAB3Q96P71 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
NECAB3Q96P71 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
NECAB3Q96P71 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.51■■■□□ 2.79
NECAB3Q96P71 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.51■■■□□ 2.79
NECAB3Q96P71 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.46■■■□□ 2.79
NECAB3Q96P71 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.45■■■□□ 2.79
NECAB3Q96P71 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
NECAB3Q96P71 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.38■■■□□ 2.77
NECAB3Q96P71 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.37■■■□□ 2.77
NECAB3Q96P71 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
NECAB3Q96P71 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
NECAB3Q96P71 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.21■■■□□ 2.75
NECAB3Q96P71 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
NECAB3Q96P71 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
NECAB3Q96P71 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
NECAB3Q96P71 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.09■■■□□ 2.73
NECAB3Q96P71 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
NECAB3Q96P71 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
NECAB3Q96P71 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
NECAB3Q96P71 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.02■■■□□ 2.72
NECAB3Q96P71 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32■■■□□ 2.71
NECAB3Q96P71 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NECAB3Q96P71 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
NECAB3Q96P71 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.91■■■□□ 2.7
NECAB3Q96P71 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
NECAB3Q96P71 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.86■■■□□ 2.69
NECAB3Q96P71 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.85■■■□□ 2.69
NECAB3Q96P71 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.82■■■□□ 2.69
NECAB3Q96P71 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.82■■■□□ 2.68
NECAB3Q96P71 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
NECAB3Q96P71 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NECAB3Q96P71 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.79■■■□□ 2.68
NECAB3Q96P71 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.77■■■□□ 2.68
NECAB3Q96P71 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.76■■■□□ 2.67
NECAB3Q96P71 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NECAB3Q96P71 DYNLL1-208ENST00000550178 581 ntBASIC31.75■■■□□ 2.67
NECAB3Q96P71 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.74■■■□□ 2.67
NECAB3Q96P71 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.72■■■□□ 2.67
NECAB3Q96P71 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
NECAB3Q96P71 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NECAB3Q96P71 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.67■■■□□ 2.66
NECAB3Q96P71 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NECAB3Q96P71 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NECAB3Q96P71 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
NECAB3Q96P71 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.6■■■□□ 2.65
NECAB3Q96P71 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.59■■■□□ 2.65
NECAB3Q96P71 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NECAB3Q96P71 RPS2P35-201ENST00000443417 897 ntBASIC31.54■■■□□ 2.64
NECAB3Q96P71 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NECAB3Q96P71 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.51■■■□□ 2.63
NECAB3Q96P71 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
NECAB3Q96P71 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
NECAB3Q96P71 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.47■■■□□ 2.63
NECAB3Q96P71 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.47■■■□□ 2.63
NECAB3Q96P71 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NECAB3Q96P71 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
NECAB3Q96P71 AL031258.1-201ENST00000623562 325 ntBASIC31.45■■■□□ 2.63
NECAB3Q96P71 RARRES2P7-201ENST00000567349 469 ntBASIC31.39■■■□□ 2.62
NECAB3Q96P71 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms