Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.9■■■□□ 2.86
CHD6Q8TD26 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.64■■■□□ 2.81
CHD6Q8TD26 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CHD6Q8TD26 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
CHD6Q8TD26 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHD6Q8TD26 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
CHD6Q8TD26 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CHD6Q8TD26 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.23■■■□□ 2.59
CHD6Q8TD26 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CHD6Q8TD26 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CHD6Q8TD26 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
CHD6Q8TD26 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CHD6Q8TD26 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.82■■■□□ 2.52
CHD6Q8TD26 AC006077.2-201ENST00000623591 457 ntBASIC30.59■■■□□ 2.49
CHD6Q8TD26 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHD6Q8TD26 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CHD6Q8TD26 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CHD6Q8TD26 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC30.49■■■□□ 2.47
CHD6Q8TD26 ZNRF2P1-201ENST00000441407 443 ntBASIC30.49■■■□□ 2.47
CHD6Q8TD26 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CHD6Q8TD26 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.24■■■□□ 2.43
CHD6Q8TD26 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD6Q8TD26 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CHD6Q8TD26 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
CHD6Q8TD26 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.05■■■□□ 2.4
CHD6Q8TD26 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.04■■■□□ 2.4
CHD6Q8TD26 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
CHD6Q8TD26 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHD6Q8TD26 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHD6Q8TD26 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CHD6Q8TD26 AP002365.1-201ENST00000603448 772 ntBASIC29.69■■■□□ 2.34
CHD6Q8TD26 AL356512.1-201ENST00000607453 1739 ntBASIC29.69■■■□□ 2.34
CHD6Q8TD26 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.68■■■□□ 2.34
CHD6Q8TD26 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.64■■■□□ 2.33
CHD6Q8TD26 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.64■■■□□ 2.33
CHD6Q8TD26 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
CHD6Q8TD26 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
CHD6Q8TD26 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.59■■■□□ 2.33
CHD6Q8TD26 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.5■■■□□ 2.31
CHD6Q8TD26 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
CHD6Q8TD26 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.49■■■□□ 2.31
CHD6Q8TD26 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.44■■■□□ 2.3
CHD6Q8TD26 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
CHD6Q8TD26 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CHD6Q8TD26 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CHD6Q8TD26 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CHD6Q8TD26 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.29■■■□□ 2.28
CHD6Q8TD26 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CHD6Q8TD26 AC015813.7-201ENST00000623294 581 ntBASIC29.26■■■□□ 2.27
CHD6Q8TD26 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.07■■■□□ 2.24
CHD6Q8TD26 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD6Q8TD26 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.24
CHD6Q8TD26 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
CHD6Q8TD26 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.99■■■□□ 2.23
CHD6Q8TD26 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
CHD6Q8TD26 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.94■■■□□ 2.22
CHD6Q8TD26 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
CHD6Q8TD26 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.92■■■□□ 2.22
CHD6Q8TD26 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.92■■■□□ 2.22
CHD6Q8TD26 RPS2P35-201ENST00000443417 897 ntBASIC28.91■■■□□ 2.22
CHD6Q8TD26 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
CHD6Q8TD26 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.83■■■□□ 2.21
CHD6Q8TD26 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CHD6Q8TD26 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CHD6Q8TD26 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.7■■■□□ 2.19
CHD6Q8TD26 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.66■■■□□ 2.18
CHD6Q8TD26 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHD6Q8TD26 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.65■■■□□ 2.18
CHD6Q8TD26 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
CHD6Q8TD26 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHD6Q8TD26 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHD6Q8TD26 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHD6Q8TD26 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
CHD6Q8TD26 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.55■■■□□ 2.16
CHD6Q8TD26 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CHD6Q8TD26 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.53■■■□□ 2.16
CHD6Q8TD26 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CHD6Q8TD26 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
CHD6Q8TD26 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CHD6Q8TD26 RARRES2P7-201ENST00000567349 469 ntBASIC28.42■■■□□ 2.14
CHD6Q8TD26 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.4■■■□□ 2.14
CHD6Q8TD26 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
CHD6Q8TD26 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.32■■■□□ 2.12
CHD6Q8TD26 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CHD6Q8TD26 DYNLL1-208ENST00000550178 581 ntBASIC28.31■■■□□ 2.12
CHD6Q8TD26 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CHD6Q8TD26 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD6Q8TD26 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD6Q8TD26 SUZ12P1-203ENST00000578195 985 ntBASIC28.2■■■□□ 2.1
CHD6Q8TD26 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHD6Q8TD26 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHD6Q8TD26 AC136428.2-201ENST00000563187 214 ntBASIC28.15■■■□□ 2.1
CHD6Q8TD26 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.13■■■□□ 2.09
CHD6Q8TD26 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.12■■■□□ 2.09
CHD6Q8TD26 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CHD6Q8TD26 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.1■■■□□ 2.09
CHD6Q8TD26 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.1■■■□□ 2.09
CHD6Q8TD26 AC097358.2-201ENST00000607541 1159 ntBASIC28.1■■■□□ 2.09
CHD6Q8TD26 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
CHD6Q8TD26 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms