Protein–RNA interactions for Protein: Q8NHX4

SPATA3, Spermatogenesis-associated protein 3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA3Q8NHX4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.88■■■□□ 2.05
SPATA3Q8NHX4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
SPATA3Q8NHX4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
SPATA3Q8NHX4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPATA3Q8NHX4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPATA3Q8NHX4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SPATA3Q8NHX4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SPATA3Q8NHX4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SPATA3Q8NHX4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC26.56■■□□□ 1.84
SPATA3Q8NHX4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SPATA3Q8NHX4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPATA3Q8NHX4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SPATA3Q8NHX4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SPATA3Q8NHX4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
SPATA3Q8NHX4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC25.99■■□□□ 1.75
SPATA3Q8NHX4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPATA3Q8NHX4 ZNRF2P1-201ENST00000441407 443 ntBASIC25.86■■□□□ 1.73
SPATA3Q8NHX4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC25.83■■□□□ 1.73
SPATA3Q8NHX4 AC006077.2-201ENST00000623591 457 ntBASIC25.77■■□□□ 1.72
SPATA3Q8NHX4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.75■■□□□ 1.71
SPATA3Q8NHX4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SPATA3Q8NHX4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SPATA3Q8NHX4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SPATA3Q8NHX4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SPATA3Q8NHX4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
SPATA3Q8NHX4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.46■■□□□ 1.67
SPATA3Q8NHX4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
SPATA3Q8NHX4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.4■■□□□ 1.66
SPATA3Q8NHX4 AL356512.1-201ENST00000607453 1739 ntBASIC25.39■■□□□ 1.65
SPATA3Q8NHX4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPATA3Q8NHX4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SPATA3Q8NHX4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.25■■□□□ 1.63
SPATA3Q8NHX4 AP002365.1-201ENST00000603448 772 ntBASIC25.14■■□□□ 1.62
SPATA3Q8NHX4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
SPATA3Q8NHX4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC24.99■■□□□ 1.59
SPATA3Q8NHX4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPATA3Q8NHX4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SPATA3Q8NHX4 AC015813.7-201ENST00000623294 581 ntBASIC24.94■■□□□ 1.58
SPATA3Q8NHX4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
SPATA3Q8NHX4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.86■■□□□ 1.57
SPATA3Q8NHX4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPATA3Q8NHX4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
SPATA3Q8NHX4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.74■■□□□ 1.55
SPATA3Q8NHX4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SPATA3Q8NHX4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC24.74■■□□□ 1.55
SPATA3Q8NHX4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPATA3Q8NHX4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPATA3Q8NHX4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
SPATA3Q8NHX4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.6■■□□□ 1.53
SPATA3Q8NHX4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SPATA3Q8NHX4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SPATA3Q8NHX4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
SPATA3Q8NHX4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SPATA3Q8NHX4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPATA3Q8NHX4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.4■■□□□ 1.5
SPATA3Q8NHX4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.37■■□□□ 1.49
SPATA3Q8NHX4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.37■■□□□ 1.49
SPATA3Q8NHX4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPATA3Q8NHX4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPATA3Q8NHX4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.34■■□□□ 1.49
SPATA3Q8NHX4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SPATA3Q8NHX4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SPATA3Q8NHX4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC24.3■■□□□ 1.48
SPATA3Q8NHX4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
SPATA3Q8NHX4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC24.27■■□□□ 1.48
SPATA3Q8NHX4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.26■■□□□ 1.47
SPATA3Q8NHX4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.26■■□□□ 1.47
SPATA3Q8NHX4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPATA3Q8NHX4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC24.21■■□□□ 1.47
SPATA3Q8NHX4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.2■■□□□ 1.46
SPATA3Q8NHX4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.19■■□□□ 1.46
SPATA3Q8NHX4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.15■■□□□ 1.46
SPATA3Q8NHX4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SPATA3Q8NHX4 RPS2P35-201ENST00000443417 897 ntBASIC24.1■■□□□ 1.45
SPATA3Q8NHX4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.09■■□□□ 1.45
SPATA3Q8NHX4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SPATA3Q8NHX4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.07■■□□□ 1.44
SPATA3Q8NHX4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SPATA3Q8NHX4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SPATA3Q8NHX4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SPATA3Q8NHX4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC24.03■■□□□ 1.44
SPATA3Q8NHX4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SPATA3Q8NHX4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC23.99■■□□□ 1.43
SPATA3Q8NHX4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPATA3Q8NHX4 DYNLL1-208ENST00000550178 581 ntBASIC23.98■■□□□ 1.43
SPATA3Q8NHX4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SPATA3Q8NHX4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SPATA3Q8NHX4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPATA3Q8NHX4 RARRES2P7-201ENST00000567349 469 ntBASIC23.92■■□□□ 1.42
SPATA3Q8NHX4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPATA3Q8NHX4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SPATA3Q8NHX4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.88■■□□□ 1.41
SPATA3Q8NHX4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.87■■□□□ 1.41
SPATA3Q8NHX4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC23.86■■□□□ 1.41
SPATA3Q8NHX4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC23.86■■□□□ 1.41
SPATA3Q8NHX4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.83■■□□□ 1.41
SPATA3Q8NHX4 AC097358.2-201ENST00000607541 1159 ntBASIC23.82■■□□□ 1.4
SPATA3Q8NHX4 AL031258.1-201ENST00000623562 325 ntBASIC23.78■■□□□ 1.4
SPATA3Q8NHX4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SPATA3Q8NHX4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms