Protein–RNA interactions for Protein: Q6V1P9

DCHS2, Protocadherin-23, humanhuman

Predictions only

Length 2,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS2Q6V1P9 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.95■■■□□ 2.39
DCHS2Q6V1P9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
DCHS2Q6V1P9 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.68■■■□□ 2.34
DCHS2Q6V1P9 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
DCHS2Q6V1P9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
DCHS2Q6V1P9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
DCHS2Q6V1P9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
DCHS2Q6V1P9 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
DCHS2Q6V1P9 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
DCHS2Q6V1P9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DCHS2Q6V1P9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.55■■■□□ 2.16
DCHS2Q6V1P9 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DCHS2Q6V1P9 AL356512.1-201ENST00000607453 1739 ntBASIC28.46■■■□□ 2.15
DCHS2Q6V1P9 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.45■■■□□ 2.14
DCHS2Q6V1P9 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
DCHS2Q6V1P9 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.36■■■□□ 2.13
DCHS2Q6V1P9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
DCHS2Q6V1P9 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
DCHS2Q6V1P9 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.06
DCHS2Q6V1P9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
DCHS2Q6V1P9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
DCHS2Q6V1P9 AC006077.2-201ENST00000623591 457 ntBASIC27.69■■■□□ 2.02
DCHS2Q6V1P9 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
DCHS2Q6V1P9 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
DCHS2Q6V1P9 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
DCHS2Q6V1P9 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.62■■■□□ 2.01
DCHS2Q6V1P9 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.61■■■□□ 2.01
DCHS2Q6V1P9 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
DCHS2Q6V1P9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
DCHS2Q6V1P9 ZNRF2P1-201ENST00000441407 443 ntBASIC27.43■■□□□ 1.98
DCHS2Q6V1P9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.31■■□□□ 1.96
DCHS2Q6V1P9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
DCHS2Q6V1P9 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.14■■□□□ 1.94
DCHS2Q6V1P9 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.13■■□□□ 1.93
DCHS2Q6V1P9 AC015813.7-201ENST00000623294 581 ntBASIC27.05■■□□□ 1.92
DCHS2Q6V1P9 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.04■■□□□ 1.92
DCHS2Q6V1P9 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DCHS2Q6V1P9 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
DCHS2Q6V1P9 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.86■■□□□ 1.89
DCHS2Q6V1P9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.8■■□□□ 1.88
DCHS2Q6V1P9 AP002365.1-201ENST00000603448 772 ntBASIC26.8■■□□□ 1.88
DCHS2Q6V1P9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
DCHS2Q6V1P9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
DCHS2Q6V1P9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.73■■□□□ 1.87
DCHS2Q6V1P9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DCHS2Q6V1P9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
DCHS2Q6V1P9 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DCHS2Q6V1P9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.63■■□□□ 1.85
DCHS2Q6V1P9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DCHS2Q6V1P9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
DCHS2Q6V1P9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.5■■□□□ 1.83
DCHS2Q6V1P9 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.49■■□□□ 1.83
DCHS2Q6V1P9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.49■■□□□ 1.83
DCHS2Q6V1P9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DCHS2Q6V1P9 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.44■■□□□ 1.82
DCHS2Q6V1P9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.42■■□□□ 1.82
DCHS2Q6V1P9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
DCHS2Q6V1P9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
DCHS2Q6V1P9 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DCHS2Q6V1P9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DCHS2Q6V1P9 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.28■■□□□ 1.8
DCHS2Q6V1P9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DCHS2Q6V1P9 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DCHS2Q6V1P9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
DCHS2Q6V1P9 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DCHS2Q6V1P9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
DCHS2Q6V1P9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
DCHS2Q6V1P9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.23■■□□□ 1.79
DCHS2Q6V1P9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
DCHS2Q6V1P9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
DCHS2Q6V1P9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
DCHS2Q6V1P9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
DCHS2Q6V1P9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.02■■□□□ 1.76
DCHS2Q6V1P9 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC26.01■■□□□ 1.75
DCHS2Q6V1P9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.01■■□□□ 1.75
DCHS2Q6V1P9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
DCHS2Q6V1P9 DYNLL1-208ENST00000550178 581 ntBASIC26■■□□□ 1.75
DCHS2Q6V1P9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.98■■□□□ 1.75
DCHS2Q6V1P9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.95■■□□□ 1.75
DCHS2Q6V1P9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.95■■□□□ 1.74
DCHS2Q6V1P9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.92■■□□□ 1.74
DCHS2Q6V1P9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
DCHS2Q6V1P9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DCHS2Q6V1P9 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
DCHS2Q6V1P9 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
DCHS2Q6V1P9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DCHS2Q6V1P9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
DCHS2Q6V1P9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
DCHS2Q6V1P9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.86■■□□□ 1.73
DCHS2Q6V1P9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.86■■□□□ 1.73
DCHS2Q6V1P9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
DCHS2Q6V1P9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
DCHS2Q6V1P9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
DCHS2Q6V1P9 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
DCHS2Q6V1P9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
DCHS2Q6V1P9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
DCHS2Q6V1P9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.77■■□□□ 1.72
DCHS2Q6V1P9 RARRES2P7-201ENST00000567349 469 ntBASIC25.76■■□□□ 1.71
DCHS2Q6V1P9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
DCHS2Q6V1P9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms