Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF213Q63HN8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF213Q63HN8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF213Q63HN8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF213Q63HN8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF213Q63HN8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RNF213Q63HN8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF213Q63HN8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF213Q63HN8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF213Q63HN8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF213Q63HN8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF213Q63HN8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF213Q63HN8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF213Q63HN8 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF213Q63HN8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RNF213Q63HN8 ZNRF2P1-201ENST00000441407 443 ntBASIC18.02■□□□□ 0.47
RNF213Q63HN8 AC006077.2-201ENST00000623591 457 ntBASIC17.94■□□□□ 0.46
RNF213Q63HN8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF213Q63HN8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF213Q63HN8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF213Q63HN8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF213Q63HN8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF213Q63HN8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.77■□□□□ 0.43
RNF213Q63HN8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF213Q63HN8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF213Q63HN8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RNF213Q63HN8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF213Q63HN8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF213Q63HN8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF213Q63HN8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF213Q63HN8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF213Q63HN8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF213Q63HN8 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF213Q63HN8 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF213Q63HN8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF213Q63HN8 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF213Q63HN8 AP002365.1-201ENST00000603448 772 ntBASIC17.47■□□□□ 0.39
RNF213Q63HN8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
RNF213Q63HN8 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF213Q63HN8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF213Q63HN8 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
RNF213Q63HN8 AL356512.1-201ENST00000607453 1739 ntBASIC17.4■□□□□ 0.38
RNF213Q63HN8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RNF213Q63HN8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF213Q63HN8 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF213Q63HN8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF213Q63HN8 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF213Q63HN8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RNF213Q63HN8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RNF213Q63HN8 AC015813.7-201ENST00000623294 581 ntBASIC17.2■□□□□ 0.34
RNF213Q63HN8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF213Q63HN8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF213Q63HN8 RPS2P35-201ENST00000443417 897 ntBASIC17.11■□□□□ 0.33
RNF213Q63HN8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF213Q63HN8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF213Q63HN8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF213Q63HN8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RNF213Q63HN8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RNF213Q63HN8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17■□□□□ 0.31
RNF213Q63HN8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RNF213Q63HN8 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC16.98■□□□□ 0.31
RNF213Q63HN8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF213Q63HN8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF213Q63HN8 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF213Q63HN8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF213Q63HN8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF213Q63HN8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF213Q63HN8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF213Q63HN8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.87■□□□□ 0.29
RNF213Q63HN8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF213Q63HN8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF213Q63HN8 RARRES2P7-201ENST00000567349 469 ntBASIC16.79■□□□□ 0.28
RNF213Q63HN8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF213Q63HN8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RNF213Q63HN8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.74■□□□□ 0.27
RNF213Q63HN8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF213Q63HN8 DYNLL1-208ENST00000550178 581 ntBASIC16.73■□□□□ 0.27
RNF213Q63HN8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RNF213Q63HN8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RNF213Q63HN8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF213Q63HN8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RNF213Q63HN8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF213Q63HN8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF213Q63HN8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF213Q63HN8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF213Q63HN8 SUZ12P1-203ENST00000578195 985 ntBASIC16.68■□□□□ 0.26
RNF213Q63HN8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF213Q63HN8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF213Q63HN8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF213Q63HN8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RNF213Q63HN8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF213Q63HN8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF213Q63HN8 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF213Q63HN8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF213Q63HN8 AC136428.2-201ENST00000563187 214 ntBASIC16.58■□□□□ 0.24
RNF213Q63HN8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF213Q63HN8 AC097358.2-201ENST00000607541 1159 ntBASIC16.57■□□□□ 0.24
RNF213Q63HN8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF213Q63HN8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF213Q63HN8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms