Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.31■■■■□ 3.08
RSPO4Q2I0M5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.99■■■■□ 3.03
RSPO4Q2I0M5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.79■■■■□ 3
RSPO4Q2I0M5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
RSPO4Q2I0M5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
RSPO4Q2I0M5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
RSPO4Q2I0M5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
RSPO4Q2I0M5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RSPO4Q2I0M5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.76■■■□□ 2.83
RSPO4Q2I0M5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RSPO4Q2I0M5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RSPO4Q2I0M5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.27■■■□□ 2.76
RSPO4Q2I0M5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
RSPO4Q2I0M5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
RSPO4Q2I0M5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.13■■■□□ 2.73
RSPO4Q2I0M5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RSPO4Q2I0M5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RSPO4Q2I0M5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
RSPO4Q2I0M5 AL356512.1-201ENST00000607453 1739 ntBASIC31.85■■■□□ 2.69
RSPO4Q2I0M5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.8■■■□□ 2.68
RSPO4Q2I0M5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RSPO4Q2I0M5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
RSPO4Q2I0M5 ZNRF2P1-201ENST00000441407 443 ntBASIC31.65■■■□□ 2.66
RSPO4Q2I0M5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
RSPO4Q2I0M5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RSPO4Q2I0M5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RSPO4Q2I0M5 AC006077.2-201ENST00000623591 457 ntBASIC31.54■■■□□ 2.64
RSPO4Q2I0M5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.5■■■□□ 2.63
RSPO4Q2I0M5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
RSPO4Q2I0M5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.37■■■□□ 2.61
RSPO4Q2I0M5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RSPO4Q2I0M5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.12■■■□□ 2.57
RSPO4Q2I0M5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
RSPO4Q2I0M5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
RSPO4Q2I0M5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
RSPO4Q2I0M5 AC015813.7-201ENST00000623294 581 ntBASIC30.88■■■□□ 2.53
RSPO4Q2I0M5 AP002365.1-201ENST00000603448 772 ntBASIC30.83■■■□□ 2.53
RSPO4Q2I0M5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.68■■■□□ 2.5
RSPO4Q2I0M5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
RSPO4Q2I0M5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RSPO4Q2I0M5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
RSPO4Q2I0M5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.52■■■□□ 2.48
RSPO4Q2I0M5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RSPO4Q2I0M5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.41■■■□□ 2.46
RSPO4Q2I0M5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.39■■■□□ 2.46
RSPO4Q2I0M5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.39■■■□□ 2.46
RSPO4Q2I0M5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
RSPO4Q2I0M5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.36■■■□□ 2.45
RSPO4Q2I0M5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.3■■■□□ 2.44
RSPO4Q2I0M5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
RSPO4Q2I0M5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
RSPO4Q2I0M5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.17■■■□□ 2.42
RSPO4Q2I0M5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.16■■■□□ 2.42
RSPO4Q2I0M5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RSPO4Q2I0M5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
RSPO4Q2I0M5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
RSPO4Q2I0M5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.04■■■□□ 2.4
RSPO4Q2I0M5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RSPO4Q2I0M5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RSPO4Q2I0M5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.99■■■□□ 2.39
RSPO4Q2I0M5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.98■■■□□ 2.39
RSPO4Q2I0M5 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RSPO4Q2I0M5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.91■■■□□ 2.38
RSPO4Q2I0M5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
RSPO4Q2I0M5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.9■■■□□ 2.38
RSPO4Q2I0M5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
RSPO4Q2I0M5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RSPO4Q2I0M5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.85■■■□□ 2.37
RSPO4Q2I0M5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.83■■■□□ 2.37
RSPO4Q2I0M5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.78■■■□□ 2.36
RSPO4Q2I0M5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.78■■■□□ 2.36
RSPO4Q2I0M5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RSPO4Q2I0M5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.77■■■□□ 2.36
RSPO4Q2I0M5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.76■■■□□ 2.35
RSPO4Q2I0M5 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.75■■■□□ 2.35
RSPO4Q2I0M5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.73■■■□□ 2.35
RSPO4Q2I0M5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.73■■■□□ 2.35
RSPO4Q2I0M5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RSPO4Q2I0M5 DYNLL1-208ENST00000550178 581 ntBASIC29.7■■■□□ 2.35
RSPO4Q2I0M5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
RSPO4Q2I0M5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.69■■■□□ 2.34
RSPO4Q2I0M5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RSPO4Q2I0M5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RSPO4Q2I0M5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
RSPO4Q2I0M5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RSPO4Q2I0M5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RSPO4Q2I0M5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.61■■■□□ 2.33
RSPO4Q2I0M5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RSPO4Q2I0M5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RSPO4Q2I0M5 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.55■■■□□ 2.32
RSPO4Q2I0M5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RSPO4Q2I0M5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.47■■■□□ 2.31
RSPO4Q2I0M5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.47■■■□□ 2.31
RSPO4Q2I0M5 RPS2P35-201ENST00000443417 897 ntBASIC29.46■■■□□ 2.31
RSPO4Q2I0M5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.46■■■□□ 2.31
RSPO4Q2I0M5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.46■■■□□ 2.31
RSPO4Q2I0M5 RARRES2P7-201ENST00000567349 469 ntBASIC29.44■■■□□ 2.3
RSPO4Q2I0M5 AL031258.1-201ENST00000623562 325 ntBASIC29.44■■■□□ 2.3
RSPO4Q2I0M5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RSPO4Q2I0M5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 426.7 ms