Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
GABREP78334 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.79■■■□□ 2.84
GABREP78334 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.34■■■□□ 2.77
GABREP78334 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
GABREP78334 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
GABREP78334 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
GABREP78334 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
GABREP78334 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
GABREP78334 AL356512.1-201ENST00000607453 1739 ntBASIC31.4■■■□□ 2.62
GABREP78334 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.33■■■□□ 2.61
GABREP78334 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
GABREP78334 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
GABREP78334 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.09■■■□□ 2.57
GABREP78334 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.07■■■□□ 2.56
GABREP78334 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
GABREP78334 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
GABREP78334 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
GABREP78334 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
GABREP78334 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
GABREP78334 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
GABREP78334 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
GABREP78334 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
GABREP78334 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.39■■■□□ 2.46
GABREP78334 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
GABREP78334 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
GABREP78334 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
GABREP78334 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.18■■■□□ 2.42
GABREP78334 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.16■■■□□ 2.42
GABREP78334 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
GABREP78334 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
GABREP78334 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.94■■■□□ 2.38
GABREP78334 ZNRF2P1-201ENST00000441407 443 ntBASIC29.9■■■□□ 2.38
GABREP78334 AC006077.2-201ENST00000623591 457 ntBASIC29.88■■■□□ 2.37
GABREP78334 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.87■■■□□ 2.37
GABREP78334 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.87■■■□□ 2.37
GABREP78334 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.75■■■□□ 2.35
GABREP78334 AC015813.7-201ENST00000623294 581 ntBASIC29.65■■■□□ 2.34
GABREP78334 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
GABREP78334 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
GABREP78334 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
GABREP78334 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.37■■■□□ 2.29
GABREP78334 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
GABREP78334 AP002365.1-201ENST00000603448 772 ntBASIC29.16■■■□□ 2.26
GABREP78334 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
GABREP78334 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
GABREP78334 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
GABREP78334 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
GABREP78334 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.06■■■□□ 2.24
GABREP78334 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
GABREP78334 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.96■■■□□ 2.23
GABREP78334 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
GABREP78334 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.93■■■□□ 2.22
GABREP78334 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
GABREP78334 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.91■■■□□ 2.22
GABREP78334 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.86■■■□□ 2.21
GABREP78334 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
GABREP78334 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.83■■■□□ 2.21
GABREP78334 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.83■■■□□ 2.21
GABREP78334 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
GABREP78334 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
GABREP78334 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.8■■■□□ 2.2
GABREP78334 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.79■■■□□ 2.2
GABREP78334 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
GABREP78334 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.73■■■□□ 2.19
GABREP78334 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
GABREP78334 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.62■■■□□ 2.17
GABREP78334 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.61■■■□□ 2.17
GABREP78334 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
GABREP78334 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.6■■■□□ 2.17
GABREP78334 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
GABREP78334 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
GABREP78334 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.54■■■□□ 2.16
GABREP78334 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
GABREP78334 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
GABREP78334 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
GABREP78334 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
GABREP78334 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
GABREP78334 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
GABREP78334 DYNLL1-208ENST00000550178 581 ntBASIC28.44■■■□□ 2.14
GABREP78334 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.4■■■□□ 2.14
GABREP78334 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
GABREP78334 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
GABREP78334 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
GABREP78334 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
GABREP78334 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
GABREP78334 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.33■■■□□ 2.13
GABREP78334 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.32■■■□□ 2.12
GABREP78334 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
GABREP78334 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
GABREP78334 AL031258.1-201ENST00000623562 325 ntBASIC28.2■■■□□ 2.1
GABREP78334 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.17■■■□□ 2.1
GABREP78334 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.17■■■□□ 2.1
GABREP78334 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
GABREP78334 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
GABREP78334 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
GABREP78334 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
GABREP78334 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.13■■■□□ 2.09
GABREP78334 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.13■■■□□ 2.09
GABREP78334 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
GABREP78334 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms