Protein–RNA interactions for Protein: P49792

RANBP2, E3 SUMO-protein ligase RanBP2, humanhuman

Known RBP Predictions only

Length 3,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP2P49792 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.59■■■■□ 3.77
RANBP2P49792 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.21■■■■□ 3.71
RANBP2P49792 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.81■■■■□ 3.64
RANBP2P49792 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
RANBP2P49792 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.54
RANBP2P49792 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC37.11■■■■□ 3.53
RANBP2P49792 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
RANBP2P49792 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.69■■■■□ 3.46
RANBP2P49792 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.63■■■■□ 3.45
RANBP2P49792 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
RANBP2P49792 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC36.57■■■■□ 3.45
RANBP2P49792 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
RANBP2P49792 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.28■■■■□ 3.4
RANBP2P49792 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.26■■■■□ 3.4
RANBP2P49792 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.1■■■■□ 3.37
RANBP2P49792 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
RANBP2P49792 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
RANBP2P49792 AL356512.1-201ENST00000607453 1739 ntBASIC35.69■■■■□ 3.3
RANBP2P49792 AC006077.2-201ENST00000623591 457 ntBASIC35.62■■■■□ 3.29
RANBP2P49792 ZNRF2P1-201ENST00000441407 443 ntBASIC35.56■■■■□ 3.28
RANBP2P49792 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
RANBP2P49792 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.45■■■■□ 3.27
RANBP2P49792 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.44■■■■□ 3.26
RANBP2P49792 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
RANBP2P49792 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
RANBP2P49792 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
RANBP2P49792 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.37■■■■□ 3.25
RANBP2P49792 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.31■■■■□ 3.24
RANBP2P49792 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
RANBP2P49792 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.19■■■■□ 3.22
RANBP2P49792 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.91■■■■□ 3.18
RANBP2P49792 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
RANBP2P49792 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
RANBP2P49792 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
RANBP2P49792 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC34.72■■■■□ 3.15
RANBP2P49792 AP002365.1-201ENST00000603448 772 ntBASIC34.6■■■■□ 3.13
RANBP2P49792 AC015813.7-201ENST00000623294 581 ntBASIC34.55■■■■□ 3.12
RANBP2P49792 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.49■■■■□ 3.11
RANBP2P49792 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.48■■■■□ 3.11
RANBP2P49792 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.47■■■■□ 3.11
RANBP2P49792 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.43■■■■□ 3.1
RANBP2P49792 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
RANBP2P49792 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
RANBP2P49792 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.24■■■■□ 3.07
RANBP2P49792 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC34.2■■■■□ 3.07
RANBP2P49792 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC34.17■■■■□ 3.06
RANBP2P49792 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
RANBP2P49792 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
RANBP2P49792 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
RANBP2P49792 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.96■■■■□ 3.03
RANBP2P49792 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.94■■■■□ 3.02
RANBP2P49792 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.87■■■■□ 3.01
RANBP2P49792 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
RANBP2P49792 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC33.84■■■■□ 3.01
RANBP2P49792 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.82■■■■□ 3
RANBP2P49792 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
RANBP2P49792 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
RANBP2P49792 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC33.77■■■■□ 3
RANBP2P49792 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.77■■■■□ 3
RANBP2P49792 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.75■■■□□ 2.99
RANBP2P49792 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.71■■■□□ 2.99
RANBP2P49792 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.67■■■□□ 2.98
RANBP2P49792 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
RANBP2P49792 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.64■■■□□ 2.98
RANBP2P49792 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
RANBP2P49792 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
RANBP2P49792 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
RANBP2P49792 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.61■■■□□ 2.97
RANBP2P49792 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
RANBP2P49792 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
RANBP2P49792 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.57■■■□□ 2.96
RANBP2P49792 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.55■■■□□ 2.96
RANBP2P49792 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33.54■■■□□ 2.96
RANBP2P49792 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
RANBP2P49792 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.43■■■□□ 2.94
RANBP2P49792 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RANBP2P49792 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.41■■■□□ 2.94
RANBP2P49792 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.4■■■□□ 2.94
RANBP2P49792 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.4■■■□□ 2.94
RANBP2P49792 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
RANBP2P49792 DYNLL1-208ENST00000550178 581 ntBASIC33.39■■■□□ 2.94
RANBP2P49792 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
RANBP2P49792 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
RANBP2P49792 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.36■■■□□ 2.93
RANBP2P49792 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
RANBP2P49792 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.28■■■□□ 2.92
RANBP2P49792 RPS2P35-201ENST00000443417 897 ntBASIC33.27■■■□□ 2.92
RANBP2P49792 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.26■■■□□ 2.92
RANBP2P49792 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.25■■■□□ 2.91
RANBP2P49792 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.24■■■□□ 2.91
RANBP2P49792 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RANBP2P49792 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RANBP2P49792 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RANBP2P49792 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.12■■■□□ 2.89
RANBP2P49792 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
RANBP2P49792 AC136428.2-201ENST00000563187 214 ntBASIC33.04■■■□□ 2.88
RANBP2P49792 RARRES2P7-201ENST00000567349 469 ntBASIC33.02■■■□□ 2.88
RANBP2P49792 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
RANBP2P49792 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33■■■□□ 2.87
RANBP2P49792 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms