Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.67■■□□□ 1.22
HERC2O95714 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
HERC2O95714 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HERC2O95714 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
HERC2O95714 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
HERC2O95714 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HERC2O95714 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HERC2O95714 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HERC2O95714 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.53■■□□□ 1.04
HERC2O95714 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HERC2O95714 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
HERC2O95714 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HERC2O95714 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.25■□□□□ 0.99
HERC2O95714 ZNRF2P1-201ENST00000441407 443 ntBASIC21.25■□□□□ 0.99
HERC2O95714 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HERC2O95714 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.05■□□□□ 0.96
HERC2O95714 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HERC2O95714 AC006077.2-201ENST00000623591 457 ntBASIC21.03■□□□□ 0.96
HERC2O95714 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HERC2O95714 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HERC2O95714 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HERC2O95714 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HERC2O95714 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HERC2O95714 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.83■□□□□ 0.92
HERC2O95714 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.81■□□□□ 0.92
HERC2O95714 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HERC2O95714 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.79■□□□□ 0.92
HERC2O95714 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.6■□□□□ 0.89
HERC2O95714 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HERC2O95714 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HERC2O95714 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
HERC2O95714 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HERC2O95714 AP002365.1-201ENST00000603448 772 ntBASIC20.57■□□□□ 0.88
HERC2O95714 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HERC2O95714 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC2O95714 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HERC2O95714 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
HERC2O95714 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
HERC2O95714 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HERC2O95714 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
HERC2O95714 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
HERC2O95714 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC2O95714 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HERC2O95714 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
HERC2O95714 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.26■□□□□ 0.83
HERC2O95714 AL356512.1-201ENST00000607453 1739 ntBASIC20.25■□□□□ 0.83
HERC2O95714 AC015813.7-201ENST00000623294 581 ntBASIC20.22■□□□□ 0.83
HERC2O95714 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HERC2O95714 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HERC2O95714 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
HERC2O95714 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.13■□□□□ 0.81
HERC2O95714 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.09■□□□□ 0.81
HERC2O95714 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
HERC2O95714 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.05■□□□□ 0.8
HERC2O95714 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HERC2O95714 RPS2P35-201ENST00000443417 897 ntBASIC20.03■□□□□ 0.8
HERC2O95714 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.03■□□□□ 0.8
HERC2O95714 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HERC2O95714 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HERC2O95714 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.96■□□□□ 0.79
HERC2O95714 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.96■□□□□ 0.79
HERC2O95714 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.96■□□□□ 0.79
HERC2O95714 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.89■□□□□ 0.78
HERC2O95714 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HERC2O95714 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.83■□□□□ 0.77
HERC2O95714 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC2O95714 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERC2O95714 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC2O95714 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.79■□□□□ 0.76
HERC2O95714 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERC2O95714 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERC2O95714 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.7■□□□□ 0.74
HERC2O95714 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HERC2O95714 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HERC2O95714 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HERC2O95714 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HERC2O95714 SUZ12P1-203ENST00000578195 985 ntBASIC19.64■□□□□ 0.73
HERC2O95714 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HERC2O95714 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.62■□□□□ 0.73
HERC2O95714 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.61■□□□□ 0.73
HERC2O95714 RARRES2P7-201ENST00000567349 469 ntBASIC19.6■□□□□ 0.73
HERC2O95714 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HERC2O95714 DYNLL1-208ENST00000550178 581 ntBASIC19.6■□□□□ 0.73
HERC2O95714 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.58■□□□□ 0.72
HERC2O95714 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HERC2O95714 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.55■□□□□ 0.72
HERC2O95714 AC136428.2-201ENST00000563187 214 ntBASIC19.54■□□□□ 0.72
HERC2O95714 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HERC2O95714 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.49■□□□□ 0.71
HERC2O95714 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.49■□□□□ 0.71
HERC2O95714 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HERC2O95714 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.47■□□□□ 0.71
HERC2O95714 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HERC2O95714 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HERC2O95714 AC097358.2-201ENST00000607541 1159 ntBASIC19.45■□□□□ 0.7
HERC2O95714 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HERC2O95714 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HERC2O95714 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HERC2O95714 AL031258.1-201ENST00000623562 325 ntBASIC19.39■□□□□ 0.69
HERC2O95714 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms