Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.38■■■□□ 2.13
CRLF1O75462 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
CRLF1O75462 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
CRLF1O75462 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
CRLF1O75462 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CRLF1O75462 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CRLF1O75462 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CRLF1O75462 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CRLF1O75462 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.06■■□□□ 1.92
CRLF1O75462 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CRLF1O75462 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CRLF1O75462 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.73■■□□□ 1.87
CRLF1O75462 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CRLF1O75462 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.66■■□□□ 1.86
CRLF1O75462 AL356512.1-201ENST00000607453 1739 ntBASIC26.62■■□□□ 1.85
CRLF1O75462 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CRLF1O75462 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
CRLF1O75462 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
CRLF1O75462 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRLF1O75462 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRLF1O75462 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.26■■□□□ 1.79
CRLF1O75462 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF1O75462 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CRLF1O75462 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CRLF1O75462 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CRLF1O75462 ZNRF2P1-201ENST00000441407 443 ntBASIC26.04■■□□□ 1.76
CRLF1O75462 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.01■■□□□ 1.75
CRLF1O75462 AC006077.2-201ENST00000623591 457 ntBASIC26■■□□□ 1.75
CRLF1O75462 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
CRLF1O75462 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.86■■□□□ 1.73
CRLF1O75462 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CRLF1O75462 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
CRLF1O75462 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.71■■□□□ 1.71
CRLF1O75462 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CRLF1O75462 AC015813.7-201ENST00000623294 581 ntBASIC25.57■■□□□ 1.68
CRLF1O75462 AP002365.1-201ENST00000603448 772 ntBASIC25.37■■□□□ 1.65
CRLF1O75462 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
CRLF1O75462 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CRLF1O75462 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.28■■□□□ 1.64
CRLF1O75462 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CRLF1O75462 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.19■■□□□ 1.62
CRLF1O75462 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CRLF1O75462 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CRLF1O75462 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CRLF1O75462 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
CRLF1O75462 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
CRLF1O75462 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25.06■■□□□ 1.6
CRLF1O75462 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC25.05■■□□□ 1.6
CRLF1O75462 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.01■■□□□ 1.59
CRLF1O75462 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
CRLF1O75462 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC24.98■■□□□ 1.59
CRLF1O75462 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC24.98■■□□□ 1.59
CRLF1O75462 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
CRLF1O75462 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC24.93■■□□□ 1.58
CRLF1O75462 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
CRLF1O75462 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CRLF1O75462 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
CRLF1O75462 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.89■■□□□ 1.57
CRLF1O75462 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CRLF1O75462 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CRLF1O75462 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC24.81■■□□□ 1.56
CRLF1O75462 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CRLF1O75462 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CRLF1O75462 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CRLF1O75462 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.72■■□□□ 1.55
CRLF1O75462 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.69■■□□□ 1.54
CRLF1O75462 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CRLF1O75462 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.67■■□□□ 1.54
CRLF1O75462 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CRLF1O75462 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CRLF1O75462 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CRLF1O75462 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.61■■□□□ 1.53
CRLF1O75462 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CRLF1O75462 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CRLF1O75462 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CRLF1O75462 DYNLL1-208ENST00000550178 581 ntBASIC24.53■■□□□ 1.52
CRLF1O75462 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CRLF1O75462 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
CRLF1O75462 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CRLF1O75462 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CRLF1O75462 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.42■■□□□ 1.5
CRLF1O75462 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.42■■□□□ 1.5
CRLF1O75462 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
CRLF1O75462 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CRLF1O75462 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.4■■□□□ 1.5
CRLF1O75462 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CRLF1O75462 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.39■■□□□ 1.49
CRLF1O75462 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.39■■□□□ 1.49
CRLF1O75462 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.39■■□□□ 1.49
CRLF1O75462 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CRLF1O75462 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CRLF1O75462 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CRLF1O75462 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CRLF1O75462 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.33■■□□□ 1.49
CRLF1O75462 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CRLF1O75462 AL031258.1-201ENST00000623562 325 ntBASIC24.33■■□□□ 1.49
CRLF1O75462 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CRLF1O75462 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.31■■□□□ 1.48
CRLF1O75462 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.31■■□□□ 1.48
CRLF1O75462 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 782.7 ms