Protein–RNA interactions for Protein: O75074

LRP3, Low-density lipoprotein receptor-related protein 3, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3O75074 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.54■■■■□ 3.12
LRP3O75074 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.21■■■■□ 3.07
LRP3O75074 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.09■■■■□ 3.05
LRP3O75074 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
LRP3O75074 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
LRP3O75074 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.98■■■□□ 2.87
LRP3O75074 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.87
LRP3O75074 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.88■■■□□ 2.85
LRP3O75074 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
LRP3O75074 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
LRP3O75074 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
LRP3O75074 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.48■■■□□ 2.79
LRP3O75074 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LRP3O75074 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.4■■■□□ 2.78
LRP3O75074 AL356512.1-201ENST00000607453 1739 ntBASIC32.36■■■□□ 2.77
LRP3O75074 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
LRP3O75074 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
LRP3O75074 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
LRP3O75074 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
LRP3O75074 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LRP3O75074 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
LRP3O75074 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.86■■■□□ 2.69
LRP3O75074 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LRP3O75074 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
LRP3O75074 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
LRP3O75074 ZNRF2P1-201ENST00000441407 443 ntBASIC31.64■■■□□ 2.66
LRP3O75074 AC006077.2-201ENST00000623591 457 ntBASIC31.63■■■□□ 2.65
LRP3O75074 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.56■■■□□ 2.64
LRP3O75074 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.53■■■□□ 2.64
LRP3O75074 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.4■■■□□ 2.62
LRP3O75074 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
LRP3O75074 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.24■■■□□ 2.59
LRP3O75074 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
LRP3O75074 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
LRP3O75074 AC015813.7-201ENST00000623294 581 ntBASIC31.07■■■□□ 2.56
LRP3O75074 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.82■■■□□ 2.52
LRP3O75074 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
LRP3O75074 AP002365.1-201ENST00000603448 772 ntBASIC30.81■■■□□ 2.52
LRP3O75074 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
LRP3O75074 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
LRP3O75074 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LRP3O75074 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.54■■■□□ 2.48
LRP3O75074 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
LRP3O75074 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.5■■■□□ 2.47
LRP3O75074 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
LRP3O75074 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LRP3O75074 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.47■■■□□ 2.47
LRP3O75074 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.46■■■□□ 2.47
LRP3O75074 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.35■■■□□ 2.45
LRP3O75074 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.34■■■□□ 2.45
LRP3O75074 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
LRP3O75074 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
LRP3O75074 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.28■■■□□ 2.44
LRP3O75074 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.28■■■□□ 2.44
LRP3O75074 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
LRP3O75074 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
LRP3O75074 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
LRP3O75074 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.22■■■□□ 2.43
LRP3O75074 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.19■■■□□ 2.42
LRP3O75074 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.18■■■□□ 2.42
LRP3O75074 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LRP3O75074 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
LRP3O75074 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
LRP3O75074 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
LRP3O75074 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.01■■■□□ 2.39
LRP3O75074 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
LRP3O75074 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.93■■■□□ 2.38
LRP3O75074 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
LRP3O75074 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.92■■■□□ 2.38
LRP3O75074 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.91■■■□□ 2.38
LRP3O75074 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
LRP3O75074 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
LRP3O75074 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
LRP3O75074 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
LRP3O75074 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
LRP3O75074 DYNLL1-208ENST00000550178 581 ntBASIC29.77■■■□□ 2.36
LRP3O75074 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LRP3O75074 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LRP3O75074 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
LRP3O75074 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.66■■■□□ 2.34
LRP3O75074 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LRP3O75074 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LRP3O75074 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.64■■■□□ 2.34
LRP3O75074 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.64■■■□□ 2.34
LRP3O75074 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.62■■■□□ 2.33
LRP3O75074 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
LRP3O75074 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
LRP3O75074 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.6■■■□□ 2.33
LRP3O75074 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.58■■■□□ 2.33
LRP3O75074 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
LRP3O75074 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
LRP3O75074 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.57■■■□□ 2.32
LRP3O75074 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
LRP3O75074 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
LRP3O75074 AL031258.1-201ENST00000623562 325 ntBASIC29.54■■■□□ 2.32
LRP3O75074 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LRP3O75074 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LRP3O75074 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
LRP3O75074 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.51■■■□□ 2.31
LRP3O75074 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms