Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.18■■■■□ 3.54
TRANK1O15050 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.99■■■■□ 3.51
TRANK1O15050 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.81■■■■□ 3.48
TRANK1O15050 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
TRANK1O15050 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
TRANK1O15050 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
TRANK1O15050 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
TRANK1O15050 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
TRANK1O15050 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
TRANK1O15050 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.43■■■■□ 3.26
TRANK1O15050 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
TRANK1O15050 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.28■■■■□ 3.24
TRANK1O15050 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
TRANK1O15050 AL356512.1-201ENST00000607453 1739 ntBASIC35.2■■■■□ 3.22
TRANK1O15050 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.18■■■■□ 3.22
TRANK1O15050 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
TRANK1O15050 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.83■■■■□ 3.17
TRANK1O15050 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.66■■■■□ 3.14
TRANK1O15050 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.63■■■■□ 3.13
TRANK1O15050 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
TRANK1O15050 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.41■■■■□ 3.1
TRANK1O15050 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
TRANK1O15050 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
TRANK1O15050 AC006077.2-201ENST00000623591 457 ntBASIC34.31■■■■□ 3.08
TRANK1O15050 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.07
TRANK1O15050 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.24■■■■□ 3.07
TRANK1O15050 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.17■■■■□ 3.06
TRANK1O15050 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
TRANK1O15050 ZNRF2P1-201ENST00000441407 443 ntBASIC34.03■■■■□ 3.04
TRANK1O15050 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.98■■■■□ 3.03
TRANK1O15050 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.89■■■■□ 3.02
TRANK1O15050 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
TRANK1O15050 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.68■■■□□ 2.98
TRANK1O15050 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.64■■■□□ 2.98
TRANK1O15050 AC015813.7-201ENST00000623294 581 ntBASIC33.54■■■□□ 2.96
TRANK1O15050 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
TRANK1O15050 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.43■■■□□ 2.94
TRANK1O15050 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
TRANK1O15050 AP002365.1-201ENST00000603448 772 ntBASIC33.27■■■□□ 2.92
TRANK1O15050 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.24■■■□□ 2.91
TRANK1O15050 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
TRANK1O15050 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.15■■■□□ 2.9
TRANK1O15050 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.12■■■□□ 2.89
TRANK1O15050 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
TRANK1O15050 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC33.06■■■□□ 2.88
TRANK1O15050 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.05■■■□□ 2.88
TRANK1O15050 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
TRANK1O15050 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.95■■■□□ 2.87
TRANK1O15050 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
TRANK1O15050 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
TRANK1O15050 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.86■■■□□ 2.85
TRANK1O15050 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.85■■■□□ 2.85
TRANK1O15050 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
TRANK1O15050 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.8■■■□□ 2.84
TRANK1O15050 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.77■■■□□ 2.84
TRANK1O15050 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.71■■■□□ 2.83
TRANK1O15050 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
TRANK1O15050 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
TRANK1O15050 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
TRANK1O15050 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
TRANK1O15050 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
TRANK1O15050 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.55■■■□□ 2.8
TRANK1O15050 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
TRANK1O15050 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
TRANK1O15050 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
TRANK1O15050 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.53■■■□□ 2.8
TRANK1O15050 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
TRANK1O15050 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
TRANK1O15050 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
TRANK1O15050 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
TRANK1O15050 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
TRANK1O15050 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
TRANK1O15050 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.22■■■□□ 2.75
TRANK1O15050 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.22■■■□□ 2.75
TRANK1O15050 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
TRANK1O15050 DYNLL1-208ENST00000550178 581 ntBASIC32.19■■■□□ 2.74
TRANK1O15050 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.16■■■□□ 2.74
TRANK1O15050 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.14■■■□□ 2.74
TRANK1O15050 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.13■■■□□ 2.73
TRANK1O15050 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TRANK1O15050 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
TRANK1O15050 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.12■■■□□ 2.73
TRANK1O15050 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
TRANK1O15050 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
TRANK1O15050 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TRANK1O15050 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TRANK1O15050 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.06■■■□□ 2.72
TRANK1O15050 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
TRANK1O15050 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TRANK1O15050 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.03■■■□□ 2.72
TRANK1O15050 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
TRANK1O15050 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRANK1O15050 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TRANK1O15050 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
TRANK1O15050 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.97■■■□□ 2.71
TRANK1O15050 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRANK1O15050 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.91■■■□□ 2.7
TRANK1O15050 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRANK1O15050 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
TRANK1O15050 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms