Protein–RNA interactions for Protein: O15018

PDZD2, PDZ domain-containing protein 2, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2O15018 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC29.83■■■□□ 2.37
PDZD2O15018 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.58■■■□□ 2.33
PDZD2O15018 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
PDZD2O15018 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PDZD2O15018 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
PDZD2O15018 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PDZD2O15018 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
PDZD2O15018 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
PDZD2O15018 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.15
PDZD2O15018 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.39■■■□□ 2.14
PDZD2O15018 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PDZD2O15018 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PDZD2O15018 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.19■■■□□ 2.1
PDZD2O15018 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
PDZD2O15018 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.08■■■□□ 2.09
PDZD2O15018 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PDZD2O15018 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PDZD2O15018 AL356512.1-201ENST00000607453 1739 ntBASIC27.79■■■□□ 2.04
PDZD2O15018 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
PDZD2O15018 AC006077.2-201ENST00000623591 457 ntBASIC27.58■■■□□ 2.01
PDZD2O15018 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PDZD2O15018 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC27.54■■■□□ 2
PDZD2O15018 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
PDZD2O15018 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.5■■□□□ 1.99
PDZD2O15018 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.45■■□□□ 1.98
PDZD2O15018 ZNRF2P1-201ENST00000441407 443 ntBASIC27.45■■□□□ 1.98
PDZD2O15018 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
PDZD2O15018 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PDZD2O15018 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PDZD2O15018 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.22■■□□□ 1.95
PDZD2O15018 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
PDZD2O15018 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
PDZD2O15018 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.99■■□□□ 1.91
PDZD2O15018 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PDZD2O15018 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PDZD2O15018 AC015813.7-201ENST00000623294 581 ntBASIC26.9■■□□□ 1.9
PDZD2O15018 AP002365.1-201ENST00000603448 772 ntBASIC26.8■■□□□ 1.88
PDZD2O15018 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
PDZD2O15018 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDZD2O15018 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.61■■□□□ 1.85
PDZD2O15018 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PDZD2O15018 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDZD2O15018 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDZD2O15018 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDZD2O15018 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.44■■□□□ 1.82
PDZD2O15018 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.44■■□□□ 1.82
PDZD2O15018 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
PDZD2O15018 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDZD2O15018 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PDZD2O15018 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.33■■□□□ 1.81
PDZD2O15018 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.3■■□□□ 1.8
PDZD2O15018 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
PDZD2O15018 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.29■■□□□ 1.8
PDZD2O15018 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.28■■□□□ 1.8
PDZD2O15018 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.28■■□□□ 1.8
PDZD2O15018 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDZD2O15018 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PDZD2O15018 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDZD2O15018 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.16■■□□□ 1.78
PDZD2O15018 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDZD2O15018 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDZD2O15018 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.13■■□□□ 1.77
PDZD2O15018 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.08■■□□□ 1.77
PDZD2O15018 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
PDZD2O15018 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDZD2O15018 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.06■■□□□ 1.76
PDZD2O15018 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDZD2O15018 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.04■■□□□ 1.76
PDZD2O15018 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.04■■□□□ 1.76
PDZD2O15018 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDZD2O15018 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.97■■□□□ 1.75
PDZD2O15018 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PDZD2O15018 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PDZD2O15018 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC25.9■■□□□ 1.74
PDZD2O15018 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PDZD2O15018 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PDZD2O15018 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PDZD2O15018 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PDZD2O15018 DYNLL1-208ENST00000550178 581 ntBASIC25.83■■□□□ 1.73
PDZD2O15018 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.82■■□□□ 1.72
PDZD2O15018 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PDZD2O15018 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.8■■□□□ 1.72
PDZD2O15018 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC25.8■■□□□ 1.72
PDZD2O15018 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.79■■□□□ 1.72
PDZD2O15018 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.78■■□□□ 1.72
PDZD2O15018 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PDZD2O15018 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PDZD2O15018 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.74■■□□□ 1.71
PDZD2O15018 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PDZD2O15018 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.73■■□□□ 1.71
PDZD2O15018 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDZD2O15018 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDZD2O15018 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDZD2O15018 RARRES2P7-201ENST00000567349 469 ntBASIC25.62■■□□□ 1.69
PDZD2O15018 RPS2P35-201ENST00000443417 897 ntBASIC25.61■■□□□ 1.69
PDZD2O15018 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.6■■□□□ 1.69
PDZD2O15018 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.6■■□□□ 1.69
PDZD2O15018 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.6■■□□□ 1.69
PDZD2O15018 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDZD2O15018 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms