Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.32■■■□□ 2.92
C1QTNF9BB2RNN3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
C1QTNF9BB2RNN3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.82■■■□□ 2.85
C1QTNF9BB2RNN3 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
C1QTNF9BB2RNN3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
C1QTNF9BB2RNN3 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
C1QTNF9BB2RNN3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
C1QTNF9BB2RNN3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
C1QTNF9BB2RNN3 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.81■■■□□ 2.68
C1QTNF9BB2RNN3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
C1QTNF9BB2RNN3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
C1QTNF9BB2RNN3 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
C1QTNF9BB2RNN3 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.36■■■□□ 2.61
C1QTNF9BB2RNN3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
C1QTNF9BB2RNN3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.22■■■□□ 2.59
C1QTNF9BB2RNN3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
C1QTNF9BB2RNN3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
C1QTNF9BB2RNN3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
C1QTNF9BB2RNN3 AL356512.1-201ENST00000607453 1739 ntBASIC30.92■■■□□ 2.54
C1QTNF9BB2RNN3 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.88■■■□□ 2.53
C1QTNF9BB2RNN3 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
C1QTNF9BB2RNN3 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
C1QTNF9BB2RNN3 ZNRF2P1-201ENST00000441407 443 ntBASIC30.74■■■□□ 2.51
C1QTNF9BB2RNN3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
C1QTNF9BB2RNN3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
C1QTNF9BB2RNN3 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
C1QTNF9BB2RNN3 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.62■■■□□ 2.49
C1QTNF9BB2RNN3 AC006077.2-201ENST00000623591 457 ntBASIC30.62■■■□□ 2.49
C1QTNF9BB2RNN3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
C1QTNF9BB2RNN3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.48■■■□□ 2.47
C1QTNF9BB2RNN3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
C1QTNF9BB2RNN3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.2■■■□□ 2.43
C1QTNF9BB2RNN3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
C1QTNF9BB2RNN3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
C1QTNF9BB2RNN3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
C1QTNF9BB2RNN3 AC015813.7-201ENST00000623294 581 ntBASIC29.98■■■□□ 2.39
C1QTNF9BB2RNN3 AP002365.1-201ENST00000603448 772 ntBASIC29.96■■■□□ 2.39
C1QTNF9BB2RNN3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.8■■■□□ 2.36
C1QTNF9BB2RNN3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
C1QTNF9BB2RNN3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
C1QTNF9BB2RNN3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.67■■■□□ 2.34
C1QTNF9BB2RNN3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
C1QTNF9BB2RNN3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
C1QTNF9BB2RNN3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
C1QTNF9BB2RNN3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.56■■■□□ 2.32
C1QTNF9BB2RNN3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.55■■■□□ 2.32
C1QTNF9BB2RNN3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
C1QTNF9BB2RNN3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.51■■■□□ 2.31
C1QTNF9BB2RNN3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.45■■■□□ 2.31
C1QTNF9BB2RNN3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
C1QTNF9BB2RNN3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
C1QTNF9BB2RNN3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
C1QTNF9BB2RNN3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.32■■■□□ 2.28
C1QTNF9BB2RNN3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.31■■■□□ 2.28
C1QTNF9BB2RNN3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
C1QTNF9BB2RNN3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
C1QTNF9BB2RNN3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.2■■■□□ 2.26
C1QTNF9BB2RNN3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.15■■■□□ 2.26
C1QTNF9BB2RNN3 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.15■■■□□ 2.26
C1QTNF9BB2RNN3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.14■■■□□ 2.26
C1QTNF9BB2RNN3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
C1QTNF9BB2RNN3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
C1QTNF9BB2RNN3 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
C1QTNF9BB2RNN3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
C1QTNF9BB2RNN3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.04■■■□□ 2.24
C1QTNF9BB2RNN3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.03■■■□□ 2.24
C1QTNF9BB2RNN3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
C1QTNF9BB2RNN3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.96■■■□□ 2.23
C1QTNF9BB2RNN3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.96■■■□□ 2.23
C1QTNF9BB2RNN3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.95■■■□□ 2.22
C1QTNF9BB2RNN3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.95■■■□□ 2.22
C1QTNF9BB2RNN3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.94■■■□□ 2.22
C1QTNF9BB2RNN3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
C1QTNF9BB2RNN3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
C1QTNF9BB2RNN3 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.93■■■□□ 2.22
C1QTNF9BB2RNN3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.88■■■□□ 2.21
C1QTNF9BB2RNN3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
C1QTNF9BB2RNN3 DYNLL1-208ENST00000550178 581 ntBASIC28.87■■■□□ 2.21
C1QTNF9BB2RNN3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.86■■■□□ 2.21
C1QTNF9BB2RNN3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.86■■■□□ 2.21
C1QTNF9BB2RNN3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
C1QTNF9BB2RNN3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
C1QTNF9BB2RNN3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
C1QTNF9BB2RNN3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
C1QTNF9BB2RNN3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
C1QTNF9BB2RNN3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.77■■■□□ 2.2
C1QTNF9BB2RNN3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
C1QTNF9BB2RNN3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.74■■■□□ 2.19
C1QTNF9BB2RNN3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
C1QTNF9BB2RNN3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
C1QTNF9BB2RNN3 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
C1QTNF9BB2RNN3 RPS2P35-201ENST00000443417 897 ntBASIC28.66■■■□□ 2.18
C1QTNF9BB2RNN3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.65■■■□□ 2.18
C1QTNF9BB2RNN3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.65■■■□□ 2.18
C1QTNF9BB2RNN3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.64■■■□□ 2.18
C1QTNF9BB2RNN3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
C1QTNF9BB2RNN3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
C1QTNF9BB2RNN3 AL031258.1-201ENST00000623562 325 ntBASIC28.62■■■□□ 2.17
C1QTNF9BB2RNN3 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.59■■■□□ 2.17
C1QTNF9BB2RNN3 RARRES2P7-201ENST00000567349 469 ntBASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms