Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 STXBP2-219ENST00000600702 770 ntTSL 216■□□□□ 0.151e-11■■■□□ 18.3
XRN2Q9H0D6 NFIC-207ENST00000589164 435 ntTSL 314.91□□□□□ -0.024e-6■■■□□ 18.3
XRN2Q9H0D6 DKC1-207ENST00000473552 656 ntTSL 210.93□□□□□ -0.661e-11■■■□□ 18.3
XRN2Q9H0D6 DKC1-203ENST00000413910 851 ntTSL 58.86□□□□□ -0.991e-11■■■□□ 18.3
XRN2Q9H0D6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.665e-6■■■□□ 18.2
XRN2Q9H0D6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.565e-6■■■□□ 18.2
XRN2Q9H0D6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.315e-6■■■□□ 18.2
XRN2Q9H0D6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.315e-6■■■□□ 18.2
XRN2Q9H0D6 HPCAL1-203ENST00000419810 4781 ntTSL 1 (best)13.17□□□□□ -0.35e-6■■■□□ 18.2
XRN2Q9H0D6 MKNK2-207ENST00000588014 2413 ntTSL 217■□□□□ 0.313e-6■■■□□ 18.2
XRN2Q9H0D6 MKNK2-208ENST00000589441 803 ntTSL 514.81□□□□□ -0.043e-6■■■□□ 18.2
XRN2Q9H0D6 MKNK2-206ENST00000587416 4093 ntTSL 212.69□□□□□ -0.383e-6■■■□□ 18.2
XRN2Q9H0D6 MKNK2-211ENST00000591142 875 ntTSL 2 BASIC10.83□□□□□ -0.683e-6■■■□□ 18.2
XRN2Q9H0D6 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.37e-7■■■□□ 18.2
XRN2Q9H0D6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.367e-7■■■□□ 18.2
XRN2Q9H0D6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.362e-7■■■□□ 18.2
XRN2Q9H0D6 GOLGA2-203ENST00000458730 704 ntTSL 520.02■□□□□ 0.81e-6■■■□□ 18.2
XRN2Q9H0D6 ANKRD11-207ENST00000562816 573 ntTSL 414.11□□□□□ -0.151e-6■■■□□ 18.2
XRN2Q9H0D6 EXOC3L4-206ENST00000560304 657 ntTSL 324.32■■□□□ 1.488e-7■■■□□ 18.2
XRN2Q9H0D6 EXOC3L4-204ENST00000559693 813 ntTSL 320■□□□□ 0.798e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.09■□□□□ 0.655e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-210ENST00000586944 4661 ntTSL 217.42■□□□□ 0.385e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.36■□□□□ 0.055e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.035e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.145e-7■■■□□ 18.2
XRN2Q9H0D6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.13□□□□□ -0.155e-7■■■□□ 18.2
XRN2Q9H0D6 DNM2-208ENST00000587329 498 ntTSL 312.94□□□□□ -0.344e-7■■■□□ 18.2
XRN2Q9H0D6 TRAF4-209ENST00000473421 585 ntTSL 315.7■□□□□ 0.15e-7■■■□□ 18.2
XRN2Q9H0D6 NCLN-203ENST00000587740 1210 ntTSL 1 (best)19.26■□□□□ 0.673e-7■■■□□ 18.2
XRN2Q9H0D6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.31■■■■□ 3.247e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.2■■■■□ 3.237e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-206ENST00000432186 905 ntTSL 222.12■■□□□ 1.137e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.84■□□□□ 0.617e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.82■□□□□ 0.447e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-214ENST00000492475 920 ntTSL 516.53■□□□□ 0.247e-6■■■□□ 18.2
XRN2Q9H0D6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.33■□□□□ 0.27e-6■■■□□ 18.2
XRN2Q9H0D6 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC11.82□□□□□ -0.527e-7■■■□□ 18.2
XRN2Q9H0D6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.072e-6■■■□□ 18.2
XRN2Q9H0D6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.74□□□□□ -0.052e-6■■■□□ 18.2
XRN2Q9H0D6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.91□□□□□ -0.182e-6■■■□□ 18.2
XRN2Q9H0D6 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.282e-6■■■□□ 18.2
XRN2Q9H0D6 SATB2-207ENST00000463386 372 ntTSL 413.19□□□□□ -0.32e-6■■■□□ 18.2
XRN2Q9H0D6 DVL1-203ENST00000472445 639 ntTSL 221.62■■□□□ 1.053e-6■■■□□ 18.2
XRN2Q9H0D6 BSDC1-202ENST00000373520 1630 ntTSL 217.47■□□□□ 0.391e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.25■□□□□ 0.191e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.13■□□□□ 0.171e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC14.81□□□□□ -0.041e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC13.06□□□□□ -0.321e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.421e-6■■■□□ 18.1
XRN2Q9H0D6 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)10.5□□□□□ -0.731e-6■■■□□ 18.1
XRN2Q9H0D6 FGFR3-209ENST00000507588 336 ntTSL 1 (best)22.46■■□□□ 1.192e-17■■■□□ 18.1
XRN2Q9H0D6 FGFR3-207ENST00000474521 545 ntTSL 220.6■□□□□ 0.892e-17■■■□□ 18.1
XRN2Q9H0D6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.74□□□□□ -0.058e-7■■■□□ 18.1
XRN2Q9H0D6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.118e-7■■■□□ 18.1
XRN2Q9H0D6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.53■■■■□ 3.121e-6■■■□□ 18.1
XRN2Q9H0D6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.791e-6■■■□□ 18.1
XRN2Q9H0D6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.721e-6■■■□□ 18.1
XRN2Q9H0D6 PQLC1-206ENST00000474967 2319 ntTSL 519.74■□□□□ 0.751e-6■■■□□ 18.1
XRN2Q9H0D6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.87■■□□□ 1.891e-6■■■□□ 18.1
XRN2Q9H0D6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■■■□□ 18.1
XRN2Q9H0D6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.99■□□□□ 0.951e-6■■■□□ 18.1
XRN2Q9H0D6 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.811e-6■■■□□ 18.1
XRN2Q9H0D6 MAP3K11-204ENST00000526293 571 ntTSL 418.22■□□□□ 0.511e-6■■■□□ 18.1
XRN2Q9H0D6 MAP3K11-207ENST00000529839 561 ntTSL 416.72■□□□□ 0.271e-6■■■□□ 18.1
XRN2Q9H0D6 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-6■■■□□ 18.1
XRN2Q9H0D6 ZNF337-203ENST00000481610 572 ntTSL 38.04□□□□□ -1.122e-6■■■□□ 18.1
XRN2Q9H0D6 GSE1-204ENST00000411612 872 ntTSL 525.77■■□□□ 1.727e-7■■■□□ 18.1
XRN2Q9H0D6 FOXK2-204ENST00000527313 779 ntTSL 324.42■■□□□ 1.56e-18■■■□□ 18.1
XRN2Q9H0D6 FOXK2-207ENST00000570585 756 ntTSL 316.81■□□□□ 0.286e-18■■■□□ 18.1
XRN2Q9H0D6 EIF1-204ENST00000469308 815 ntTSL 226.8■■□□□ 1.884e-7■■■□□ 18.1
XRN2Q9H0D6 EIF1-202ENST00000462917 2170 ntTSL 1 (best)19.27■□□□□ 0.684e-7■■■□□ 18.1
XRN2Q9H0D6 EIF1-201ENST00000310837 1120 ntTSL 1 (best)10.5□□□□□ -0.734e-7■■■□□ 18.1
XRN2Q9H0D6 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.67□□□□□ -1.024e-7■■■□□ 18.1
XRN2Q9H0D6 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.24e-7■■■□□ 18.1
XRN2Q9H0D6 EIF1-205ENST00000482111 1428 ntTSL 27.48□□□□□ -1.214e-7■■■□□ 18.1
XRN2Q9H0D6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.395e-7■■■□□ 18.1
XRN2Q9H0D6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.315e-7■■■□□ 18.1
XRN2Q9H0D6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.411e-10■■■□□ 18.1
XRN2Q9H0D6 FUS-209ENST00000566605 1787 ntTSL 1 (best)26.94■■□□□ 1.95e-9■■■□□ 18.1
XRN2Q9H0D6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.835e-9■■■□□ 18.1
XRN2Q9H0D6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.695e-9■■■□□ 18.1
XRN2Q9H0D6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.085e-9■■■□□ 18.1
XRN2Q9H0D6 FUS-206ENST00000487509 4920 ntTSL 213.48□□□□□ -0.255e-9■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-202ENST00000585423 494 ntTSL 231.89■■■□□ 2.76e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-203ENST00000586497 573 ntTSL 331.15■■■□□ 2.586e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.486e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.14■■■□□ 2.266e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.06■■■□□ 2.086e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.57■■□□□ 1.526e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.06■■□□□ 1.446e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-212ENST00000589791 1329 ntTSL 221.52■■□□□ 1.036e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-208ENST00000588450 2858 ntTSL 218.36■□□□□ 0.536e-8■■■□□ 18.1
XRN2Q9H0D6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.346e-8■■■□□ 18.1
XRN2Q9H0D6 MTA1-219ENST00000551236 461 ntTSL 314.24□□□□□ -0.131e-6■■■□□ 18.1
XRN2Q9H0D6 TEX22-202ENST00000548638 508 ntTSL 514.13□□□□□ -0.151e-6■■■□□ 18.1
XRN2Q9H0D6 BCAR1-221ENST00000569006 574 ntTSL 417.72■□□□□ 0.436e-7■■■□□ 18.1
XRN2Q9H0D6 KLHL8-206ENST00000506274 1924 ntTSL 228.3■■■□□ 2.121e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-204ENST00000504029 593 ntTSL 423.08■■□□□ 1.291e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.271e-11■■■□□ 18.1
XRN2Q9H0D6 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC9.32□□□□□ -0.921e-11■■■□□ 18.1
Retrieved 100 of 21,068 protein–RNA pairs in 117 ms