RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 NISCHQ9Y2I1 1504 aa46.69■■■■■ 5.07
FGFR3-209ENST00000507588 CCDC180Q9P1Z9 1646 aa41.93■■■■■ 4.3
FGFR3-209ENST00000507588 ABCC9O60706 1549 aa41.29■■■■■ 4.2
FGFR3-209ENST00000507588 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
FGFR3-209ENST00000507588 NACADO15069 1562 aa39.44■■■■□ 3.9
FGFR3-209ENST00000507588 MYO15BQ96JP2 1530 aa39.08■■■■□ 3.85
FGFR3-209ENST00000507588 DCAF8L2P0C7V8 631 aa38.91■■■■□ 3.82
FGFR3-209ENST00000507588 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
FGFR3-209ENST00000507588 ZCCHC6Q5VYS8 1495 aaKnown RBP38.84■■■■□ 3.81
FGFR3-209ENST00000507588 DCAF1Q9Y4B6 1507 aa38.7■■■■□ 3.79
FGFR3-209ENST00000507588 BICRAQ9NZM4 1560 aa38.46■■■■□ 3.75
FGFR3-209ENST00000507588 PABPN1Q86U42 306 aaKnown RBP eCLIP38.36■■■■□ 3.73
FGFR3-209ENST00000507588 DNAJC5BQ9UF47 199 aa38.3■■■■□ 3.72
FGFR3-209ENST00000507588 SCRIBQ14160 1630 aa38.07■■■■□ 3.68
FGFR3-209ENST00000507588 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
FGFR3-209ENST00000507588 EIF4G1Q04637 1599 aaKnown RBP37.46■■■■□ 3.59
FGFR3-209ENST00000507588 CC2D2AQ9P2K1 1620 aa37.44■■■■□ 3.58
FGFR3-209ENST00000507588 CECR2Q9BXF3 1484 aa37.2■■■■□ 3.54
FGFR3-209ENST00000507588 SMARCA4P51532 1647 aa36.41■■■■□ 3.42
FGFR3-209ENST00000507588 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
FGFR3-209ENST00000507588 BAZ1AQ9NRL2 1556 aaPredicted RBP36.27■■■■□ 3.4
FGFR3-209ENST00000507588 ATAD2BQ9ULI0 1458 aa36.26■■■■□ 3.4
FGFR3-209ENST00000507588 SMARCA2P51531 1590 aa36.26■■■■□ 3.39
FGFR3-209ENST00000507588 HMGXB3Q12766 1538 aa36.21■■■■□ 3.39
FGFR3-209ENST00000507588 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
FGFR3-209ENST00000507588 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
FGFR3-209ENST00000507588 BAZ1BQ9UIG0 1483 aaKnown RBP35.94■■■■□ 3.34
FGFR3-209ENST00000507588 ERCC6Q03468 1493 aa35.65■■■■□ 3.3
FGFR3-209ENST00000507588 NESP48681 1621 aa35.6■■■■□ 3.29
FGFR3-209ENST00000507588 WIZO95785 1651 aa35.59■■■■□ 3.29
FGFR3-209ENST00000507588 CUX2O14529 1486 aa35.56■■■■□ 3.28
FGFR3-209ENST00000507588 LAMC3Q9Y6N6 1575 aa35.55■■■■□ 3.28
FGFR3-209ENST00000507588 THOC2Q8NI27 1593 aaKnown RBP35.34■■■■□ 3.25
FGFR3-209ENST00000507588 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
FGFR3-209ENST00000507588 RSF1Q96T23 1441 aaPredicted RBP35.31■■■■□ 3.24
FGFR3-209ENST00000507588 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
FGFR3-209ENST00000507588 TOP2AP11388 1531 aaKnown RBP35.19■■■■□ 3.22
FGFR3-209ENST00000507588 CADPSQ9ULU8 1353 aa35.19■■■■□ 3.22
FGFR3-209ENST00000507588 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
FGFR3-209ENST00000507588 CFTRP13569 1480 aa34.93■■■■□ 3.18
FGFR3-209ENST00000507588 MRC2Q9UBG0 1479 aa34.93■■■■□ 3.18
FGFR3-209ENST00000507588 WDR62O43379 1518 aa34.9■■■■□ 3.18
FGFR3-209ENST00000507588 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
FGFR3-209ENST00000507588 CEP164Q9UPV0 1460 aa34.86■■■■□ 3.17
FGFR3-209ENST00000507588 FANCD2Q9BXW9 1451 aa34.83■■■■□ 3.17
FGFR3-209ENST00000507588 CCDC88BA6NC98 1476 aa34.68■■■■□ 3.14
FGFR3-209ENST00000507588 URB2Q14146 1524 aaKnown RBP34.54■■■■□ 3.12
FGFR3-209ENST00000507588 TOPBP1Q92547 1522 aa34.24■■■■□ 3.07
FGFR3-209ENST00000507588 ABCC8Q09428 1581 aa34.2■■■■□ 3.07
FGFR3-209ENST00000507588 DNMBPQ6XZF7 1577 aa34.2■■■■□ 3.07
FGFR3-209ENST00000507588 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
FGFR3-209ENST00000507588 ZNF608Q9ULD9 1512 aaPredicted RBP34.01■■■■□ 3.04
FGFR3-209ENST00000507588 EIF4G3O43432 1585 aaKnown RBP33.98■■■■□ 3.03
FGFR3-209ENST00000507588 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
FGFR3-209ENST00000507588 POLA1P09884 1462 aaPredicted RBP33.91■■■■□ 3.02
FGFR3-209ENST00000507588 OSCARQ8IYS5 282 aa33.8■■■■□ 3
FGFR3-209ENST00000507588 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
FGFR3-209ENST00000507588 CUX1P39880 1505 aa33.79■■■■□ 3
FGFR3-209ENST00000507588 WDR97A6NE52 1622 aa33.75■■■□□ 2.99
FGFR3-209ENST00000507588 FGD5Q6ZNL6 1462 aa33.74■■■□□ 2.99
FGFR3-209ENST00000507588 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.981e-12■■■□□ 18.6
FGFR3-209ENST00000507588 RAD54L2Q9Y4B4 1467 aa33.69■■■□□ 2.98
FGFR3-209ENST00000507588 CHD1O14646 1710 aa33.69■■■□□ 2.98
FGFR3-209ENST00000507588 SOGA1O94964 1423 aa33.66■■■□□ 2.98
FGFR3-209ENST00000507588 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
FGFR3-209ENST00000507588 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
FGFR3-209ENST00000507588 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
FGFR3-209ENST00000507588 TDRD9Q8NDG6 1382 aaKnown RBP33.51■■■□□ 2.96
FGFR3-209ENST00000507588 PBRM1Q86U86 1689 aa33.47■■■□□ 2.95
FGFR3-209ENST00000507588 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
FGFR3-209ENST00000507588 BIVM-ERCC5R4GMW8 1640 aa33.46■■■□□ 2.95
FGFR3-209ENST00000507588 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
FGFR3-209ENST00000507588 MAGI1Q96QZ7 1491 aaPredicted RBP33.43■■■□□ 2.94
FGFR3-209ENST00000507588 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
FGFR3-209ENST00000507588 GRIN2BQ13224 1484 aa33.41■■■□□ 2.94
FGFR3-209ENST00000507588 ABCA10Q8WWZ4 1543 aa33.41■■■□□ 2.94
FGFR3-209ENST00000507588 TOP2BQ02880 1626 aa33.41■■■□□ 2.94
FGFR3-209ENST00000507588 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
FGFR3-209ENST00000507588 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
FGFR3-209ENST00000507588 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
FGFR3-209ENST00000507588 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.923e-7■■■□□ 16.4
FGFR3-209ENST00000507588 SYNJ2O15056 1496 aa33.28■■■□□ 2.92
FGFR3-209ENST00000507588 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
FGFR3-209ENST00000507588 FBLN2P98095 1184 aa33.27■■■□□ 2.92
FGFR3-209ENST00000507588 CHMP7Q8WUX9 453 aaPredicted RBP33.15■■■□□ 2.9
FGFR3-209ENST00000507588 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
FGFR3-209ENST00000507588 ARAP1Q96P48 1450 aa33.11■■■□□ 2.89
FGFR3-209ENST00000507588 ERICH3Q5RHP9 1530 aa33.02■■■□□ 2.88
FGFR3-209ENST00000507588 GRIN2AQ12879 1464 aa33■■■□□ 2.87
FGFR3-209ENST00000507588 CYB5RLQ6IPT4 315 aa32.93■■■□□ 2.86
FGFR3-209ENST00000507588 FHAD1B1AJZ9 1412 aa32.92■■■□□ 2.86
FGFR3-209ENST00000507588 CEP170Q5SW79 1584 aa32.91■■■□□ 2.86
FGFR3-209ENST00000507588 NUP160Q12769 1436 aa32.88■■■□□ 2.85
FGFR3-209ENST00000507588 SHROOM2Q13796 1616 aa32.8■■■□□ 2.84
FGFR3-209ENST00000507588 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.82
FGFR3-209ENST00000507588 CUL7Q14999 1698 aa32.69■■■□□ 2.82
FGFR3-209ENST00000507588 RUSC2Q8N2Y8 1516 aa32.66■■■□□ 2.82
FGFR3-209ENST00000507588 KIF27Q86VH2 1401 aa32.64■■■□□ 2.82
FGFR3-209ENST00000507588 IGF1RP08069 1367 aa32.53■■■□□ 2.8
FGFR3-209ENST00000507588 PRG4Q92954 1404 aaPredicted RBP32.44■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms