RNA–Protein interactions for RNA: ENST00000413910.5

DKC1-203, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 5

Gene DKC1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-203ENST00000413910 AEBP2Q6ZN18 517 aaPredicted RBP21.51■■□□□ 1.03
DKC1-203ENST00000413910 CHIC1Q5VXU3 224 aa21.29■■□□□ 1
DKC1-203ENST00000413910 PHF23Q9BUL5 403 aaPredicted RBP18.68■□□□□ 0.58
DKC1-203ENST00000413910 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.54
DKC1-203ENST00000413910 SENP3Q9H4L4 574 aaPredicted RBP18.33■□□□□ 0.52
DKC1-203ENST00000413910 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
DKC1-203ENST00000413910 FOXD1Q16676 465 aa16.9■□□□□ 0.3
DKC1-203ENST00000413910 ADRA2BP18089 450 aa16.4■□□□□ 0.22
DKC1-203ENST00000413910 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
DKC1-203ENST00000413910 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
DKC1-203ENST00000413910 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
DKC1-203ENST00000413910 ABCC9O60706 1549 aa15.66■□□□□ 0.1
DKC1-203ENST00000413910 MSH5O43196 834 aa15.6■□□□□ 0.09
DKC1-203ENST00000413910 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
DKC1-203ENST00000413910 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.05
DKC1-203ENST00000413910 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.05
DKC1-203ENST00000413910 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
DKC1-203ENST00000413910 NACADO15069 1562 aa15.32■□□□□ 0.04
DKC1-203ENST00000413910 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
DKC1-203ENST00000413910 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
DKC1-203ENST00000413910 KCNA4P22459 653 aa15.17■□□□□ 0.02
DKC1-203ENST00000413910 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
DKC1-203ENST00000413910 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
DKC1-203ENST00000413910 CNKSR2Q8WXI2 1034 aa14.91□□□□□ -0.02
DKC1-203ENST00000413910 MAPK8IP2Q13387 824 aaPredicted RBP14.79□□□□□ -0.04
DKC1-203ENST00000413910 SHROOM4Q9ULL8 1493 aa14.76□□□□□ -0.05
DKC1-203ENST00000413910 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
DKC1-203ENST00000413910 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
DKC1-203ENST00000413910 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
DKC1-203ENST00000413910 PABPN1Q86U42 306 aaKnown RBP eCLIP14.67□□□□□ -0.06
DKC1-203ENST00000413910 DMRT2Q9Y5R5 561 aa14.64□□□□□ -0.07
DKC1-203ENST00000413910 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
DKC1-203ENST00000413910 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
DKC1-203ENST00000413910 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
DKC1-203ENST00000413910 DNAJC5BQ9UF47 199 aa14.46□□□□□ -0.09
DKC1-203ENST00000413910 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
DKC1-203ENST00000413910 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
DKC1-203ENST00000413910 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
DKC1-203ENST00000413910 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
DKC1-203ENST00000413910 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
DKC1-203ENST00000413910 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
DKC1-203ENST00000413910 CC2D2AQ9P2K1 1620 aa14.16□□□□□ -0.14
DKC1-203ENST00000413910 SMARCA2P51531 1590 aa14.15□□□□□ -0.14
DKC1-203ENST00000413910 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
DKC1-203ENST00000413910 PEG3Q9GZU2 1588 aa14.12□□□□□ -0.15
DKC1-203ENST00000413910 ATAD2BQ9ULI0 1458 aa14.12□□□□□ -0.15
DKC1-203ENST00000413910 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
DKC1-203ENST00000413910 RSF1Q96T23 1441 aaPredicted RBP14.08□□□□□ -0.15
DKC1-203ENST00000413910 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
DKC1-203ENST00000413910 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
DKC1-203ENST00000413910 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
DKC1-203ENST00000413910 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
DKC1-203ENST00000413910 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
DKC1-203ENST00000413910 ZBTB22O15209 634 aa13.93□□□□□ -0.18
DKC1-203ENST00000413910 WIZO95785 1651 aa13.9□□□□□ -0.18
DKC1-203ENST00000413910 TOP2AP11388 1531 aaKnown RBP13.87□□□□□ -0.19
DKC1-203ENST00000413910 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
DKC1-203ENST00000413910 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
DKC1-203ENST00000413910 CADPSQ9ULU8 1353 aa13.75□□□□□ -0.21
DKC1-203ENST00000413910 POTEDQ86YR6 584 aa13.75□□□□□ -0.21
DKC1-203ENST00000413910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.74□□□□□ -0.215e-7■■■□□ 16.5
DKC1-203ENST00000413910 CCDC88BA6NC98 1476 aa13.72□□□□□ -0.21
DKC1-203ENST00000413910 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
DKC1-203ENST00000413910 LAMC3Q9Y6N6 1575 aa13.69□□□□□ -0.22
DKC1-203ENST00000413910 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
DKC1-203ENST00000413910 CFTRP13569 1480 aa13.67□□□□□ -0.22
DKC1-203ENST00000413910 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
DKC1-203ENST00000413910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.54□□□□□ -0.24
DKC1-203ENST00000413910 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
DKC1-203ENST00000413910 NESP48681 1621 aa13.53□□□□□ -0.24
DKC1-203ENST00000413910 ATXN8OSP0DMR3 200 aa13.53□□□□□ -0.24
DKC1-203ENST00000413910 FANCD2Q9BXW9 1451 aa13.51□□□□□ -0.25
DKC1-203ENST00000413910 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
DKC1-203ENST00000413910 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
DKC1-203ENST00000413910 CEP164Q9UPV0 1460 aa13.48□□□□□ -0.25
DKC1-203ENST00000413910 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
DKC1-203ENST00000413910 PRDM2Q13029 1718 aa13.44□□□□□ -0.26
DKC1-203ENST00000413910 MRC2Q9UBG0 1479 aa13.42□□□□□ -0.26
DKC1-203ENST00000413910 CUX2O14529 1486 aa13.39□□□□□ -0.27
DKC1-203ENST00000413910 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
DKC1-203ENST00000413910 APLP2Q06481 763 aa13.37□□□□□ -0.27
DKC1-203ENST00000413910 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
DKC1-203ENST00000413910 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
DKC1-203ENST00000413910 WDR62O43379 1518 aa13.34□□□□□ -0.27
DKC1-203ENST00000413910 THOC2Q8NI27 1593 aaKnown RBP13.32□□□□□ -0.28
DKC1-203ENST00000413910 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
DKC1-203ENST00000413910 DNMBPQ6XZF7 1577 aa13.3□□□□□ -0.28
DKC1-203ENST00000413910 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
DKC1-203ENST00000413910 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
DKC1-203ENST00000413910 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
DKC1-203ENST00000413910 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
DKC1-203ENST00000413910 SOGA1O94964 1423 aa13.22□□□□□ -0.29
DKC1-203ENST00000413910 CUX1P39880 1505 aa13.21□□□□□ -0.29
DKC1-203ENST00000413910 TOP2BQ02880 1626 aa13.21□□□□□ -0.3
DKC1-203ENST00000413910 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
DKC1-203ENST00000413910 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
DKC1-203ENST00000413910 ATF5Q9Y2D1 282 aaPredicted RBP13.19□□□□□ -0.3
DKC1-203ENST00000413910 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
DKC1-203ENST00000413910 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
DKC1-203ENST00000413910 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms