RNA–Protein interactions for RNA: ENST00000473552.1

DKC1-207, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-207ENST00000473552 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
DKC1-207ENST00000473552 CHIC1Q5VXU3 224 aa29.17■■■□□ 2.26
DKC1-207ENST00000473552 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
DKC1-207ENST00000473552 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
DKC1-207ENST00000473552 FOXD1Q16676 465 aa23.78■■□□□ 1.4
DKC1-207ENST00000473552 PLPPR3Q6T4P5 718 aa23.62■■□□□ 1.37
DKC1-207ENST00000473552 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
DKC1-207ENST00000473552 PPP6R1Q9UPN7 881 aa22.68■■□□□ 1.22
DKC1-207ENST00000473552 ADRA2BP18089 450 aa22.67■■□□□ 1.22
DKC1-207ENST00000473552 PIAS4Q8N2W9 510 aaPredicted RBP22.42■■□□□ 1.18
DKC1-207ENST00000473552 MSH5O43196 834 aa22.07■■□□□ 1.12
DKC1-207ENST00000473552 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
DKC1-207ENST00000473552 PPP4R3CPQ6ZMV5 832 aa20.77■□□□□ 0.92
DKC1-207ENST00000473552 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
DKC1-207ENST00000473552 POTEDQ86YR6 584 aa20.48■□□□□ 0.87
DKC1-207ENST00000473552 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
DKC1-207ENST00000473552 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
DKC1-207ENST00000473552 CNKSR2Q8WXI2 1034 aa20.25■□□□□ 0.83
DKC1-207ENST00000473552 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
DKC1-207ENST00000473552 KCNA4P22459 653 aa20.01■□□□□ 0.79
DKC1-207ENST00000473552 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
DKC1-207ENST00000473552 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
DKC1-207ENST00000473552 NPM3O75607 178 aaKnown RBP19.84■□□□□ 0.77
DKC1-207ENST00000473552 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
DKC1-207ENST00000473552 ABCC9O60706 1549 aa19.4■□□□□ 0.7
DKC1-207ENST00000473552 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
DKC1-207ENST00000473552 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
DKC1-207ENST00000473552 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
DKC1-207ENST00000473552 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
DKC1-207ENST00000473552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.636e-12■■■□□ 17.5
DKC1-207ENST00000473552 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
DKC1-207ENST00000473552 DCAF8L2P0C7V8 631 aa18.99■□□□□ 0.63
DKC1-207ENST00000473552 NACADO15069 1562 aa18.98■□□□□ 0.63
DKC1-207ENST00000473552 RB1CC1Q8TDY2 1594 aa18.91■□□□□ 0.62
DKC1-207ENST00000473552 RNF39Q9H2S5 420 aa18.85■□□□□ 0.61
DKC1-207ENST00000473552 SLC4A2P04920 1241 aa18.77■□□□□ 0.6
DKC1-207ENST00000473552 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
DKC1-207ENST00000473552 U3KPZ7 1027 aaPredicted RBP18.6■□□□□ 0.57
DKC1-207ENST00000473552 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
DKC1-207ENST00000473552 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
DKC1-207ENST00000473552 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
DKC1-207ENST00000473552 FOXD4L1Q9NU39 408 aa18.5■□□□□ 0.55
DKC1-207ENST00000473552 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
DKC1-207ENST00000473552 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
DKC1-207ENST00000473552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
DKC1-207ENST00000473552 ZBTB22O15209 634 aa18.37■□□□□ 0.53
DKC1-207ENST00000473552 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
DKC1-207ENST00000473552 SAMD1Q6SPF0 538 aaPredicted RBP18.28■□□□□ 0.52
DKC1-207ENST00000473552 BICRAQ9NZM4 1560 aa18.27■□□□□ 0.52
DKC1-207ENST00000473552 APLP2Q06481 763 aa18.25■□□□□ 0.51
DKC1-207ENST00000473552 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
DKC1-207ENST00000473552 CAPN15O75808 1086 aa18.16■□□□□ 0.5
DKC1-207ENST00000473552 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
DKC1-207ENST00000473552 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
DKC1-207ENST00000473552 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
DKC1-207ENST00000473552 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
DKC1-207ENST00000473552 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
DKC1-207ENST00000473552 ATXN8OSP0DMR3 200 aa17.88■□□□□ 0.45
DKC1-207ENST00000473552 DSG3P32926 999 aa17.86■□□□□ 0.45
DKC1-207ENST00000473552 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
DKC1-207ENST00000473552 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
DKC1-207ENST00000473552 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
DKC1-207ENST00000473552 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
DKC1-207ENST00000473552 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
DKC1-207ENST00000473552 ABCB7O75027 752 aa17.77■□□□□ 0.44
DKC1-207ENST00000473552 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
DKC1-207ENST00000473552 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
DKC1-207ENST00000473552 POLA2Q14181 598 aa17.65■□□□□ 0.42
DKC1-207ENST00000473552 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
DKC1-207ENST00000473552 WIZO95785 1651 aa17.61■□□□□ 0.41
DKC1-207ENST00000473552 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
DKC1-207ENST00000473552 CC2D2AQ9P2K1 1620 aa17.6■□□□□ 0.41
DKC1-207ENST00000473552 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
DKC1-207ENST00000473552 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
DKC1-207ENST00000473552 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
DKC1-207ENST00000473552 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
DKC1-207ENST00000473552 TOP2AP11388 1531 aaKnown RBP17.46■□□□□ 0.39
DKC1-207ENST00000473552 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
DKC1-207ENST00000473552 ZBTB12Q9Y330 459 aaPredicted RBP17.37■□□□□ 0.37
DKC1-207ENST00000473552 FBLN2P98095 1184 aa17.21■□□□□ 0.35
DKC1-207ENST00000473552 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
DKC1-207ENST00000473552 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
DKC1-207ENST00000473552 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
DKC1-207ENST00000473552 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
DKC1-207ENST00000473552 PRDM2Q13029 1718 aa17.03■□□□□ 0.32
DKC1-207ENST00000473552 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
DKC1-207ENST00000473552 CFTRP13569 1480 aa16.97■□□□□ 0.31
DKC1-207ENST00000473552 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
DKC1-207ENST00000473552 NESP48681 1621 aa16.9■□□□□ 0.3
DKC1-207ENST00000473552 SPDYE2BA6NHP3 402 aa16.86■□□□□ 0.29
DKC1-207ENST00000473552 SPDYE6P0CI01 402 aa16.86■□□□□ 0.29
DKC1-207ENST00000473552 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
DKC1-207ENST00000473552 PDS5BQ9NTI5 1447 aa16.82■□□□□ 0.28
DKC1-207ENST00000473552 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
DKC1-207ENST00000473552 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
DKC1-207ENST00000473552 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
DKC1-207ENST00000473552 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
DKC1-207ENST00000473552 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.28
DKC1-207ENST00000473552 ABCC8Q09428 1581 aa16.74■□□□□ 0.27
DKC1-207ENST00000473552 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms