RNA–Protein interactions for RNA: ENST00000474521.1

FGFR3-207, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 2

Gene FGFR3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-207ENST00000474521 NISCHQ9Y2I1 1504 aa42.82■■■■■ 4.45
FGFR3-207ENST00000474521 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
FGFR3-207ENST00000474521 ABCC9O60706 1549 aa37.2■■■■□ 3.55
FGFR3-207ENST00000474521 RB1CC1Q8TDY2 1594 aa35.84■■■■□ 3.33
FGFR3-207ENST00000474521 NACADO15069 1562 aa35.82■■■■□ 3.32
FGFR3-207ENST00000474521 DCAF8L2P0C7V8 631 aa35.78■■■■□ 3.32
FGFR3-207ENST00000474521 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
FGFR3-207ENST00000474521 MYO15BQ96JP2 1530 aa35.65■■■■□ 3.3
FGFR3-207ENST00000474521 DCAF1Q9Y4B6 1507 aa35.48■■■■□ 3.27
FGFR3-207ENST00000474521 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.18
FGFR3-207ENST00000474521 PABPN1Q86U42 306 aaKnown RBP eCLIP34.78■■■■□ 3.16
FGFR3-207ENST00000474521 BICRAQ9NZM4 1560 aa34.71■■■■□ 3.15
FGFR3-207ENST00000474521 SCRIBQ14160 1630 aa34.66■■■■□ 3.14
FGFR3-207ENST00000474521 SHROOM4Q9ULL8 1493 aa34.45■■■■□ 3.1
FGFR3-207ENST00000474521 DNAJC5BQ9UF47 199 aa34.16■■■■□ 3.06
FGFR3-207ENST00000474521 EIF4G1Q04637 1599 aaKnown RBP33.81■■■■□ 3
FGFR3-207ENST00000474521 CC2D2AQ9P2K1 1620 aa33.66■■■□□ 2.98
FGFR3-207ENST00000474521 CECR2Q9BXF3 1484 aa33.45■■■□□ 2.95
FGFR3-207ENST00000474521 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.91
FGFR3-207ENST00000474521 SMARCA4P51532 1647 aa33.2■■■□□ 2.9
FGFR3-207ENST00000474521 NCAPD3P42695 1498 aa33.07■■■□□ 2.88
FGFR3-207ENST00000474521 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
FGFR3-207ENST00000474521 SMARCA2P51531 1590 aa33.03■■■□□ 2.88
FGFR3-207ENST00000474521 MROH2BQ7Z745 1585 aa32.96■■■□□ 2.87
FGFR3-207ENST00000474521 PEG3Q9GZU2 1588 aa32.92■■■□□ 2.86
FGFR3-207ENST00000474521 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
FGFR3-207ENST00000474521 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
FGFR3-207ENST00000474521 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
FGFR3-207ENST00000474521 WIZO95785 1651 aa32.59■■■□□ 2.81
FGFR3-207ENST00000474521 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
FGFR3-207ENST00000474521 NESP48681 1621 aa32.18■■■□□ 2.74
FGFR3-207ENST00000474521 LAMC3Q9Y6N6 1575 aa32.17■■■□□ 2.74
FGFR3-207ENST00000474521 CADPSQ9ULU8 1353 aa32.1■■■□□ 2.73
FGFR3-207ENST00000474521 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
FGFR3-207ENST00000474521 PDS5BQ9NTI5 1447 aa31.99■■■□□ 2.71
FGFR3-207ENST00000474521 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
FGFR3-207ENST00000474521 CFTRP13569 1480 aa31.9■■■□□ 2.7
FGFR3-207ENST00000474521 CUX2O14529 1486 aa31.79■■■□□ 2.68
FGFR3-207ENST00000474521 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
FGFR3-207ENST00000474521 SUPT5HO00267 1087 aaKnown RBP31.78■■■□□ 2.68
FGFR3-207ENST00000474521 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
FGFR3-207ENST00000474521 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
FGFR3-207ENST00000474521 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
FGFR3-207ENST00000474521 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
FGFR3-207ENST00000474521 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
FGFR3-207ENST00000474521 WDR62O43379 1518 aa31.5■■■□□ 2.63
FGFR3-207ENST00000474521 URB2Q14146 1524 aaKnown RBP31.35■■■□□ 2.61
FGFR3-207ENST00000474521 ABCC8Q09428 1581 aa31.26■■■□□ 2.59
FGFR3-207ENST00000474521 TOPBP1Q92547 1522 aa31.18■■■□□ 2.58
FGFR3-207ENST00000474521 DNMBPQ6XZF7 1577 aa31.14■■■□□ 2.58
FGFR3-207ENST00000474521 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
FGFR3-207ENST00000474521 CUX1P39880 1505 aa30.93■■■□□ 2.54
FGFR3-207ENST00000474521 POLA1P09884 1462 aaPredicted RBP30.91■■■□□ 2.54
FGFR3-207ENST00000474521 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
FGFR3-207ENST00000474521 DNAJC5Q9H3Z4 198 aa30.83■■■□□ 2.53
FGFR3-207ENST00000474521 TARBP1Q13395 1621 aaKnown RBP30.83■■■□□ 2.53
FGFR3-207ENST00000474521 SOGA1O94964 1423 aa30.82■■■□□ 2.52
FGFR3-207ENST00000474521 ZNF608Q9ULD9 1512 aaPredicted RBP30.82■■■□□ 2.52
FGFR3-207ENST00000474521 WRNQ14191 1432 aaPredicted RBP eCLIP30.77■■■□□ 2.523e-7■■■□□ 16.4
FGFR3-207ENST00000474521 RAD54L2Q9Y4B4 1467 aa30.76■■■□□ 2.52
FGFR3-207ENST00000474521 EIF4G3O43432 1585 aaKnown RBP30.69■■■□□ 2.5
FGFR3-207ENST00000474521 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
FGFR3-207ENST00000474521 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
FGFR3-207ENST00000474521 AQRO60306 1485 aaKnown RBP eCLIP30.67■■■□□ 2.52e-12■■■□□ 15.3
FGFR3-207ENST00000474521 WDR97A6NE52 1622 aa30.65■■■□□ 2.5
FGFR3-207ENST00000474521 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
FGFR3-207ENST00000474521 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
FGFR3-207ENST00000474521 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
FGFR3-207ENST00000474521 OSCARQ8IYS5 282 aa30.51■■■□□ 2.47
FGFR3-207ENST00000474521 GRIN2BQ13224 1484 aa30.45■■■□□ 2.47
FGFR3-207ENST00000474521 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
FGFR3-207ENST00000474521 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
FGFR3-207ENST00000474521 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
FGFR3-207ENST00000474521 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
FGFR3-207ENST00000474521 PBRM1Q86U86 1689 aa30.33■■■□□ 2.45
FGFR3-207ENST00000474521 FBLN2P98095 1184 aa30.32■■■□□ 2.44
FGFR3-207ENST00000474521 CHD1O14646 1710 aa30.28■■■□□ 2.44
FGFR3-207ENST00000474521 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
FGFR3-207ENST00000474521 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
FGFR3-207ENST00000474521 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
FGFR3-207ENST00000474521 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
FGFR3-207ENST00000474521 FHAD1B1AJZ9 1412 aa30.12■■■□□ 2.41
FGFR3-207ENST00000474521 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
FGFR3-207ENST00000474521 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
FGFR3-207ENST00000474521 GRIN2AQ12879 1464 aa30.05■■■□□ 2.4
FGFR3-207ENST00000474521 IGF1RP08069 1367 aa30.03■■■□□ 2.4
FGFR3-207ENST00000474521 CLASP1Q7Z460 1538 aa30■■■□□ 2.39
FGFR3-207ENST00000474521 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
FGFR3-207ENST00000474521 NUP160Q12769 1436 aa29.92■■■□□ 2.38
FGFR3-207ENST00000474521 RIMBP3CA6NJZ7 1639 aa29.92■■■□□ 2.38
FGFR3-207ENST00000474521 RIMBP3BA6NNM3 1639 aa29.92■■■□□ 2.38
FGFR3-207ENST00000474521 RIMBP3Q9UFD9 1639 aa29.92■■■□□ 2.38
FGFR3-207ENST00000474521 CUL7Q14999 1698 aa29.91■■■□□ 2.38
FGFR3-207ENST00000474521 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
FGFR3-207ENST00000474521 CARMIL1Q5VZK9 1371 aa29.84■■■□□ 2.37
FGFR3-207ENST00000474521 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
FGFR3-207ENST00000474521 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
FGFR3-207ENST00000474521 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
FGFR3-207ENST00000474521 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
FGFR3-207ENST00000474521 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms