Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 BPTF-205ENST00000424123 8295 ntAPPRIS ALT2 TSL 1 (best)4.58□□□□□ -1.682e-15■■□□□ 11.5
SRSF1Q07955 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.84■□□□□ 0.292e-7■■□□□ 11.5
SRSF1Q07955 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.292e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-206ENST00000474548 529 ntTSL 214.88□□□□□ -0.032e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-202ENST00000502814 653 ntTSL 323.62■■□□□ 1.377e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-207ENST00000512663 738 ntTSL 522.48■■□□□ 1.197e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-209ENST00000554947 1203 ntTSL 222.03■■□□□ 1.127e-7■■□□□ 11.5
SRSF1Q07955 SRSF11-212ENST00000475204 760 ntTSL 521.3■■□□□ 16e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-216ENST00000556175 775 ntTSL 320.79■□□□□ 0.927e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-203ENST00000507457 808 ntTSL 220.54■□□□□ 0.887e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.687e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-203ENST00000544691 1507 ntTSL 1 (best)17.58■□□□□ 0.417e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.377e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.84■□□□□ 0.297e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.247e-7■■□□□ 11.5
SRSF1Q07955 PGGHG-201ENST00000397660 578 ntTSL 515.41■□□□□ 0.068e-11■■□□□ 11.5
SRSF1Q07955 SDR39U1-218ENST00000556262 1960 ntTSL 215.25■□□□□ 0.037e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-204ENST00000507575 2092 ntTSL 214.85□□□□□ -0.037e-7■■□□□ 11.5
SRSF1Q07955 CSNK1D-223ENST00000584472 586 ntTSL 414.74□□□□□ -0.056e-8■■□□□ 11.5
SRSF1Q07955 CSNK1D-211ENST00000579316 692 ntTSL 214.73□□□□□ -0.056e-8■■□□□ 11.5
SRSF1Q07955 SDR39U1-220ENST00000556548 2336 ntTSL 214.63□□□□□ -0.077e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-215ENST00000555830 418 ntTSL 314.5□□□□□ -0.097e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.29□□□□□ -0.287e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-208ENST00000512811 471 ntTSL 513.05□□□□□ -0.327e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-206ENST00000508647 562 ntTSL 412.95□□□□□ -0.347e-7■■□□□ 11.5
SRSF1Q07955 ABCD4-203ENST00000465085 1123 ntTSL 312.54□□□□□ -0.47e-7■■□□□ 11.5
SRSF1Q07955 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC11.17□□□□□ -0.627e-7■■□□□ 11.5
SRSF1Q07955 CSNK1D-226ENST00000585026 563 ntTSL 510.72□□□□□ -0.696e-8■■□□□ 11.5
SRSF1Q07955 CSNK1D-210ENST00000579308 598 ntTSL 210.57□□□□□ -0.726e-8■■□□□ 11.5
SRSF1Q07955 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.847e-7■■□□□ 11.5
SRSF1Q07955 SDR39U1-207ENST00000553937 217 ntTSL 38.71□□□□□ -1.027e-7■■□□□ 11.5
SRSF1Q07955 SRSF11-215ENST00000486667 662 ntTSL 58.47□□□□□ -1.056e-7■■□□□ 11.5
SRSF1Q07955 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.192e-8■■□□□ 11.5
SRSF1Q07955 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.222e-8■■□□□ 11.5
SRSF1Q07955 MORF4L2-212ENST00000474653 573 ntTSL 25.22□□□□□ -1.575e-9■■□□□ 11.5
SRSF1Q07955 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.068e-10■■□□□ 11.5
SRSF1Q07955 SCMH1-217ENST00000498793 583 ntTSL 310.83□□□□□ -0.685e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-213ENST00000472037 735 ntTSL 310□□□□□ -0.815e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-212ENST00000460215 447 ntTSL 39.34□□□□□ -0.915e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC8.44□□□□□ -1.065e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.085e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC8.21□□□□□ -1.095e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC7.91□□□□□ -1.145e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.155e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC7.78□□□□□ -1.165e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC7.69□□□□□ -1.185e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-202ENST00000337495 3108 ntTSL 2 BASIC7.68□□□□□ -1.185e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC7.62□□□□□ -1.195e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC6.82□□□□□ -1.325e-7■■□□□ 11.5
SRSF1Q07955 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC6.46□□□□□ -1.385e-7■■□□□ 11.5
SRSF1Q07955 COL9A3-202ENST00000452372 596 ntTSL 518.78■□□□□ 0.61e-11■■□□□ 11.5
SRSF1Q07955 CDC6-203ENST00000577249 541 ntTSL 417.42■□□□□ 0.383e-9■■□□□ 11.5
SRSF1Q07955 CDC6-204ENST00000580824 696 ntTSL 313.92□□□□□ -0.183e-9■■□□□ 11.5
SRSF1Q07955 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.773e-9■■□□□ 11.5
SRSF1Q07955 FIRRE-201ENST00000427391 2926 ntTSL 2 BASIC8.81□□□□□ -13e-9■■□□□ 11.5
SRSF1Q07955 TMEM259-211ENST00000593068 1965 ntTSL 514.74□□□□□ -0.054e-8■■□□□ 11.5
SRSF1Q07955 TMEM259-212ENST00000607316 477 ntTSL 212.65□□□□□ -0.384e-8■■□□□ 11.5
SRSF1Q07955 MRPL38-204ENST00000464758 752 ntTSL 321.08■□□□□ 0.974e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-216ENST00000585475 580 ntTSL 520.15■□□□□ 0.824e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-213ENST00000493104 1116 ntTSL 218.4■□□□□ 0.544e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.484e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-203ENST00000461602 880 ntTSL 317.46■□□□□ 0.394e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-209ENST00000477736 843 ntTSL 216.76■□□□□ 0.274e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-214ENST00000493383 727 ntTSL 216.58■□□□□ 0.244e-7■■□□□ 11.5
SRSF1Q07955 MRPL38-215ENST00000494179 870 ntTSL 316.36■□□□□ 0.214e-7■■□□□ 11.5
SRSF1Q07955 AC087289.3-201ENST00000590947 1886 ntAPPRIS ALT2 TSL 213.38□□□□□ -0.274e-7■■□□□ 11.5
SRSF1Q07955 AC087289.3-202ENST00000593156 4270 ntTSL 29.58□□□□□ -0.884e-7■■□□□ 11.5
SRSF1Q07955 MATR3-235ENST00000506147 580 ntTSL 414.41□□□□□ -0.14e-8■■□□□ 11.5
SRSF1Q07955 MATR3-239ENST00000514694 587 ntTSL 414.04□□□□□ -0.164e-8■■□□□ 11.5
SRSF1Q07955 MATR3-238ENST00000512107 579 ntTSL 413.03□□□□□ -0.324e-8■■□□□ 11.5
SRSF1Q07955 MATR3-236ENST00000509644 750 ntTSL 313.02□□□□□ -0.334e-8■■□□□ 11.5
SRSF1Q07955 MATR3-234ENST00000505016 664 ntTSL 211.92□□□□□ -0.54e-8■■□□□ 11.5
SRSF1Q07955 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC9.84□□□□□ -0.834e-8■■□□□ 11.5
SRSF1Q07955 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.914e-8■■□□□ 11.5
SRSF1Q07955 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.414e-8■■□□□ 11.5
SRSF1Q07955 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC6.19□□□□□ -1.424e-8■■□□□ 11.5
SRSF1Q07955 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.12□□□□□ -1.594e-8■■□□□ 11.5
SRSF1Q07955 MVD-205ENST00000562981 537 ntTSL 216■□□□□ 0.154e-7■■□□□ 11.5
SRSF1Q07955 MVD-202ENST00000561895 499 ntTSL 211.16□□□□□ -0.624e-7■■□□□ 11.5
SRSF1Q07955 RAB18-205ENST00000484281 355 ntTSL 35.24□□□□□ -1.573e-6■■□□□ 11.5
SRSF1Q07955 ILF3-213ENST00000589283 599 ntTSL 312.28□□□□□ -0.442e-7■■□□□ 11.5
SRSF1Q07955 SPG7-204ENST00000561911 1025 ntTSL 513.88□□□□□ -0.199e-7■■□□□ 11.4
SRSF1Q07955 SPG7-218ENST00000568205 463 ntTSL 213.88□□□□□ -0.199e-7■■□□□ 11.4
SRSF1Q07955 SPG7-213ENST00000566221 734 ntTSL 313.25□□□□□ -0.299e-7■■□□□ 11.4
SRSF1Q07955 SPG7-215ENST00000566682 756 ntTSL 312.51□□□□□ -0.419e-7■■□□□ 11.4
SRSF1Q07955 SPG7-203ENST00000561702 2042 ntTSL 211.65□□□□□ -0.549e-7■■□□□ 11.4
SRSF1Q07955 SPG7-211ENST00000565370 686 ntTSL 311.61□□□□□ -0.559e-7■■□□□ 11.4
SRSF1Q07955 SPG7-222ENST00000569820 2305 ntTSL 59.31□□□□□ -0.929e-7■■□□□ 11.4
SRSF1Q07955 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.965e-7■■□□□ 11.4
SRSF1Q07955 UBE2G2-203ENST00000462569 762 ntTSL 219.55■□□□□ 0.724e-8■■□□□ 11.4
SRSF1Q07955 UBE2G2-207ENST00000490091 1512 ntTSL 1 (best)17.7■□□□□ 0.424e-8■■□□□ 11.4
SRSF1Q07955 UBE2G2-208ENST00000490450 424 ntTSL 38.45□□□□□ -1.064e-8■■□□□ 11.4
SRSF1Q07955 UBE2G2-210ENST00000496395 288 ntTSL 54.89□□□□□ -1.634e-8■■□□□ 11.4
SRSF1Q07955 BRI3-202ENST00000456357 667 ntTSL 216.7■□□□□ 0.262e-6■■□□□ 11.4
SRSF1Q07955 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC11.73□□□□□ -0.531e-6■■□□□ 11.4
SRSF1Q07955 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.611e-6■■□□□ 11.4
SRSF1Q07955 ABCC6-202ENST00000456970 4137 ntTSL 211□□□□□ -0.651e-6■■□□□ 11.4
SRSF1Q07955 LAMTOR5-205ENST00000531779 569 ntTSL 220.54■□□□□ 0.886e-9■■□□□ 11.4
SRSF1Q07955 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.61e-7■■□□□ 11.4
SRSF1Q07955 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.321e-7■■□□□ 11.4
Retrieved 100 of 14,836 protein–RNA pairs in 245.4 ms