RNA–Protein interactions for RNA: ENST00000555365.5

SDR39U1-212, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3 BASIC

Gene SDR39U1, Length 976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-212ENST00000555365 NISCHQ9Y2I1 1504 aa36.06■■■■□ 3.36
SDR39U1-212ENST00000555365 CCDC180Q9P1Z9 1646 aa31.74■■■□□ 2.67
SDR39U1-212ENST00000555365 ABCC9O60706 1549 aa30.37■■■□□ 2.45
SDR39U1-212ENST00000555365 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
SDR39U1-212ENST00000555365 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
SDR39U1-212ENST00000555365 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
SDR39U1-212ENST00000555365 MYO15BQ96JP2 1530 aa29.77■■■□□ 2.36
SDR39U1-212ENST00000555365 NACADO15069 1562 aa29.69■■■□□ 2.34
SDR39U1-212ENST00000555365 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
SDR39U1-212ENST00000555365 SCRIBQ14160 1630 aa29.01■■■□□ 2.23
SDR39U1-212ENST00000555365 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
SDR39U1-212ENST00000555365 UNC13AQ9UPW8 1703 aa28.8■■■□□ 2.2
SDR39U1-212ENST00000555365 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
SDR39U1-212ENST00000555365 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.152e-8■□□□□ 11.2
SDR39U1-212ENST00000555365 CECR2Q9BXF3 1484 aa27.99■■■□□ 2.07
SDR39U1-212ENST00000555365 BAZ1AQ9NRL2 1556 aaPredicted RBP27.92■■■□□ 2.06
SDR39U1-212ENST00000555365 SMARCA4P51532 1647 aa27.81■■■□□ 2.04
SDR39U1-212ENST00000555365 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
SDR39U1-212ENST00000555365 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
SDR39U1-212ENST00000555365 RSF1Q96T23 1441 aaPredicted RBP27.75■■■□□ 2.03
SDR39U1-212ENST00000555365 SUPT5HO00267 1087 aaKnown RBP27.57■■■□□ 2
SDR39U1-212ENST00000555365 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
SDR39U1-212ENST00000555365 SMARCA2P51531 1590 aa27.52■■■□□ 2
SDR39U1-212ENST00000555365 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
SDR39U1-212ENST00000555365 WIZO95785 1651 aa27.5■■□□□ 1.99
SDR39U1-212ENST00000555365 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
SDR39U1-212ENST00000555365 NCAPD3P42695 1498 aa27.39■■□□□ 1.98
SDR39U1-212ENST00000555365 BAZ1BQ9UIG0 1483 aaKnown RBP27.33■■□□□ 1.97
SDR39U1-212ENST00000555365 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
SDR39U1-212ENST00000555365 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
SDR39U1-212ENST00000555365 DNAJC5BQ9UF47 199 aa27.2■■□□□ 1.94
SDR39U1-212ENST00000555365 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
SDR39U1-212ENST00000555365 CADPSQ9ULU8 1353 aa26.64■■□□□ 1.86
SDR39U1-212ENST00000555365 CFTRP13569 1480 aa26.62■■□□□ 1.85
SDR39U1-212ENST00000555365 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
SDR39U1-212ENST00000555365 NESP48681 1621 aa26.47■■□□□ 1.83
SDR39U1-212ENST00000555365 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
SDR39U1-212ENST00000555365 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
SDR39U1-212ENST00000555365 FANCD2Q9BXW9 1451 aa26.33■■□□□ 1.81
SDR39U1-212ENST00000555365 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
SDR39U1-212ENST00000555365 ABCC8Q09428 1581 aa26.17■■□□□ 1.78
SDR39U1-212ENST00000555365 WRNQ14191 1432 aaPredicted RBP eCLIP26.16■■□□□ 1.78
SDR39U1-212ENST00000555365 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
SDR39U1-212ENST00000555365 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
SDR39U1-212ENST00000555365 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
SDR39U1-212ENST00000555365 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
SDR39U1-212ENST00000555365 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
SDR39U1-212ENST00000555365 CUX1P39880 1505 aa26.03■■□□□ 1.76
SDR39U1-212ENST00000555365 SYNJ1O43426 1573 aa26.01■■□□□ 1.75
SDR39U1-212ENST00000555365 DNMBPQ6XZF7 1577 aa26.01■■□□□ 1.75
SDR39U1-212ENST00000555365 TOP2BQ02880 1626 aa26■■□□□ 1.75
SDR39U1-212ENST00000555365 URB2Q14146 1524 aaKnown RBP25.99■■□□□ 1.75
SDR39U1-212ENST00000555365 BIVM-ERCC5R4GMW8 1640 aa25.98■■□□□ 1.75
SDR39U1-212ENST00000555365 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
SDR39U1-212ENST00000555365 THOC2Q8NI27 1593 aaKnown RBP25.93■■□□□ 1.74
SDR39U1-212ENST00000555365 WDR62O43379 1518 aa25.92■■□□□ 1.74
SDR39U1-212ENST00000555365 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
SDR39U1-212ENST00000555365 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
SDR39U1-212ENST00000555365 SOGA1O94964 1423 aa25.72■■□□□ 1.71
SDR39U1-212ENST00000555365 CUX2O14529 1486 aa25.67■■□□□ 1.7
SDR39U1-212ENST00000555365 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
SDR39U1-212ENST00000555365 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
SDR39U1-212ENST00000555365 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
SDR39U1-212ENST00000555365 TARBP1Q13395 1621 aaKnown RBP25.61■■□□□ 1.69
SDR39U1-212ENST00000555365 EEA1Q15075 1411 aa25.59■■□□□ 1.69
SDR39U1-212ENST00000555365 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
SDR39U1-212ENST00000555365 WDR97A6NE52 1622 aa25.56■■□□□ 1.68
SDR39U1-212ENST00000555365 RUSC2Q8N2Y8 1516 aa25.49■■□□□ 1.67
SDR39U1-212ENST00000555365 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
SDR39U1-212ENST00000555365 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
SDR39U1-212ENST00000555365 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
SDR39U1-212ENST00000555365 GAPVD1Q14C86 1478 aa25.44■■□□□ 1.66
SDR39U1-212ENST00000555365 ZNF608Q9ULD9 1512 aaPredicted RBP25.43■■□□□ 1.66
SDR39U1-212ENST00000555365 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
SDR39U1-212ENST00000555365 AQRO60306 1485 aaKnown RBP eCLIP25.4■■□□□ 1.66
SDR39U1-212ENST00000555365 EIF4G3O43432 1585 aaKnown RBP25.37■■□□□ 1.65
SDR39U1-212ENST00000555365 IGF1RP08069 1367 aa25.36■■□□□ 1.65
SDR39U1-212ENST00000555365 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
SDR39U1-212ENST00000555365 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
SDR39U1-212ENST00000555365 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
SDR39U1-212ENST00000555365 CUL7Q14999 1698 aa25.25■■□□□ 1.63
SDR39U1-212ENST00000555365 PRXQ9BXM0 1461 aa25.24■■□□□ 1.63
SDR39U1-212ENST00000555365 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SDR39U1-212ENST00000555365 KIF21BO75037 1637 aa25.21■■□□□ 1.63
SDR39U1-212ENST00000555365 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
SDR39U1-212ENST00000555365 SNAPC4Q5SXM2 1469 aa25.2■■□□□ 1.62
SDR39U1-212ENST00000555365 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
SDR39U1-212ENST00000555365 RAPGEF2Q9Y4G8 1499 aa25.17■■□□□ 1.62
SDR39U1-212ENST00000555365 ADAMTS12P58397 1594 aa25.17■■□□□ 1.62
SDR39U1-212ENST00000555365 GOLGA3Q08378 1498 aa25.15■■□□□ 1.62
SDR39U1-212ENST00000555365 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
SDR39U1-212ENST00000555365 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
SDR39U1-212ENST00000555365 EHMT2Q96KQ7 1210 aa25.04■■□□□ 1.6
SDR39U1-212ENST00000555365 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-212ENST00000555365 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
SDR39U1-212ENST00000555365 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
SDR39U1-212ENST00000555365 FBLN2P98095 1184 aa24.97■■□□□ 1.59
SDR39U1-212ENST00000555365 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
SDR39U1-212ENST00000555365 CHD1O14646 1710 aa24.89■■□□□ 1.57
SDR39U1-212ENST00000555365 NUP160Q12769 1436 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms