RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 NISCHQ9Y2I1 1504 aa22.65■■□□□ 1.22
SDR39U1-207ENST00000553937 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
SDR39U1-207ENST00000553937 ABCC9O60706 1549 aa20.14■□□□□ 0.81
SDR39U1-207ENST00000553937 RB1CC1Q8TDY2 1594 aa19.27■□□□□ 0.67
SDR39U1-207ENST00000553937 NACADO15069 1562 aa19.15■□□□□ 0.66
SDR39U1-207ENST00000553937 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
SDR39U1-207ENST00000553937 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
SDR39U1-207ENST00000553937 MYO15BQ96JP2 1530 aa18.9■□□□□ 0.62
SDR39U1-207ENST00000553937 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
SDR39U1-207ENST00000553937 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
SDR39U1-207ENST00000553937 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
SDR39U1-207ENST00000553937 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
SDR39U1-207ENST00000553937 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
SDR39U1-207ENST00000553937 SCRIBQ14160 1630 aa18.54■□□□□ 0.56
SDR39U1-207ENST00000553937 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
SDR39U1-207ENST00000553937 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
SDR39U1-207ENST00000553937 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
SDR39U1-207ENST00000553937 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
SDR39U1-207ENST00000553937 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
SDR39U1-207ENST00000553937 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
SDR39U1-207ENST00000553937 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
SDR39U1-207ENST00000553937 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
SDR39U1-207ENST00000553937 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
SDR39U1-207ENST00000553937 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
SDR39U1-207ENST00000553937 PEG3Q9GZU2 1588 aa17.5■□□□□ 0.39
SDR39U1-207ENST00000553937 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
SDR39U1-207ENST00000553937 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
SDR39U1-207ENST00000553937 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
SDR39U1-207ENST00000553937 NESP48681 1621 aa17.36■□□□□ 0.37
SDR39U1-207ENST00000553937 WIZO95785 1651 aa17.32■□□□□ 0.36
SDR39U1-207ENST00000553937 CUX2O14529 1486 aa17.31■□□□□ 0.36
SDR39U1-207ENST00000553937 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
SDR39U1-207ENST00000553937 KIF21AQ7Z4S6 1674 aa17.25■□□□□ 0.35
SDR39U1-207ENST00000553937 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
SDR39U1-207ENST00000553937 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-207ENST00000553937 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
SDR39U1-207ENST00000553937 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-207ENST00000553937 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
SDR39U1-207ENST00000553937 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
SDR39U1-207ENST00000553937 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
SDR39U1-207ENST00000553937 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
SDR39U1-207ENST00000553937 WDR62O43379 1518 aa16.97■□□□□ 0.31
SDR39U1-207ENST00000553937 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
SDR39U1-207ENST00000553937 CFTRP13569 1480 aa16.94■□□□□ 0.3
SDR39U1-207ENST00000553937 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SDR39U1-207ENST00000553937 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.28
SDR39U1-207ENST00000553937 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
SDR39U1-207ENST00000553937 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
SDR39U1-207ENST00000553937 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
SDR39U1-207ENST00000553937 IFT140Q96RY7 1462 aa16.58■□□□□ 0.24
SDR39U1-207ENST00000553937 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
SDR39U1-207ENST00000553937 ZNF608Q9ULD9 1512 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-207ENST00000553937 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
SDR39U1-207ENST00000553937 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-207ENST00000553937 POLA1P09884 1462 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-207ENST00000553937 CHD1O14646 1710 aa16.45■□□□□ 0.22
SDR39U1-207ENST00000553937 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
SDR39U1-207ENST00000553937 CUX1P39880 1505 aa16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 SUPT5HO00267 1087 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 TRIM41Q8WV44 630 aa16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 FGD5Q6ZNL6 1462 aa16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
SDR39U1-207ENST00000553937 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
SDR39U1-207ENST00000553937 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
SDR39U1-207ENST00000553937 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
SDR39U1-207ENST00000553937 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
SDR39U1-207ENST00000553937 SOGA1O94964 1423 aa16.35■□□□□ 0.21
SDR39U1-207ENST00000553937 PBRM1Q86U86 1689 aa16.31■□□□□ 0.2
SDR39U1-207ENST00000553937 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
SDR39U1-207ENST00000553937 ARHGEF11O15085 1522 aa16.29■□□□□ 0.2
SDR39U1-207ENST00000553937 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
SDR39U1-207ENST00000553937 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
SDR39U1-207ENST00000553937 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
SDR39U1-207ENST00000553937 FBLN2P98095 1184 aa16.23■□□□□ 0.19
SDR39U1-207ENST00000553937 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
SDR39U1-207ENST00000553937 MAGI1Q96QZ7 1491 aaPredicted RBP16.22■□□□□ 0.19
SDR39U1-207ENST00000553937 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
SDR39U1-207ENST00000553937 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
SDR39U1-207ENST00000553937 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
SDR39U1-207ENST00000553937 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
SDR39U1-207ENST00000553937 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
SDR39U1-207ENST00000553937 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
SDR39U1-207ENST00000553937 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SDR39U1-207ENST00000553937 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
SDR39U1-207ENST00000553937 CHMP7Q8WUX9 453 aaPredicted RBP16.12■□□□□ 0.17
SDR39U1-207ENST00000553937 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
SDR39U1-207ENST00000553937 CYB5RLQ6IPT4 315 aa16.07■□□□□ 0.16
SDR39U1-207ENST00000553937 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
SDR39U1-207ENST00000553937 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
SDR39U1-207ENST00000553937 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
SDR39U1-207ENST00000553937 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
SDR39U1-207ENST00000553937 NUP160Q12769 1436 aa15.95■□□□□ 0.14
SDR39U1-207ENST00000553937 SHROOM2Q13796 1616 aa15.95■□□□□ 0.14
SDR39U1-207ENST00000553937 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
SDR39U1-207ENST00000553937 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
SDR39U1-207ENST00000553937 CUL7Q14999 1698 aa15.87■□□□□ 0.13
SDR39U1-207ENST00000553937 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
SDR39U1-207ENST00000553937 KIF27Q86VH2 1401 aa15.81■□□□□ 0.12
SDR39U1-207ENST00000553937 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms