RNA–Protein interactions for RNA: ENST00000475204.5

SRSF11-212, Transcript of serine and arginine rich splicing factor 11, humanhuman

TSL 5

Gene SRSF11, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF11-212ENST00000475204 NISCHQ9Y2I1 1504 aa56.18■■■■■ 6.58
SRSF11-212ENST00000475204 CCDC180Q9P1Z9 1646 aa50.16■■■■■ 5.62
SRSF11-212ENST00000475204 ABCC9O60706 1549 aa49.03■■■■■ 5.44
SRSF11-212ENST00000475204 RB1CC1Q8TDY2 1594 aa47.19■■■■■ 5.14
SRSF11-212ENST00000475204 NACADO15069 1562 aa47.1■■■■■ 5.13
SRSF11-212ENST00000475204 ZCCHC6Q5VYS8 1495 aaKnown RBP46.79■■■■■ 5.08
SRSF11-212ENST00000475204 MYO15BQ96JP2 1530 aa46.78■■■■■ 5.08
SRSF11-212ENST00000475204 DCAF8L2P0C7V8 631 aa46.77■■■■■ 5.08
SRSF11-212ENST00000475204 DCAF1Q9Y4B6 1507 aa46.53■■■■■ 5.04
SRSF11-212ENST00000475204 UNC13AQ9UPW8 1703 aa46.35■■■■■ 5.01
SRSF11-212ENST00000475204 BICRAQ9NZM4 1560 aa45.82■■■■■ 4.93
SRSF11-212ENST00000475204 PABPN1Q86U42 306 aaKnown RBP eCLIP45.7■■■■■ 4.912e-6■■■■□ 19.7
SRSF11-212ENST00000475204 SCRIBQ14160 1630 aa45.65■■■■■ 4.9
SRSF11-212ENST00000475204 SHROOM4Q9ULL8 1493 aa45.28■■■■■ 4.84
SRSF11-212ENST00000475204 DNAJC5BQ9UF47 199 aa45.1■■■■■ 4.81
SRSF11-212ENST00000475204 EIF4G1Q04637 1599 aaKnown RBP44.58■■■■■ 4.73
SRSF11-212ENST00000475204 CC2D2AQ9P2K1 1620 aa44.45■■■■■ 4.71
SRSF11-212ENST00000475204 CECR2Q9BXF3 1484 aa44.08■■■■■ 4.65
SRSF11-212ENST00000475204 SMARCA4P51532 1647 aa43.7■■■■■ 4.59
SRSF11-212ENST00000475204 BAZ1AQ9NRL2 1556 aaPredicted RBP43.56■■■■■ 4.56
SRSF11-212ENST00000475204 ATAD2BQ9ULI0 1458 aa43.41■■■■■ 4.54
SRSF11-212ENST00000475204 NCAPD3P42695 1498 aa43.4■■■■■ 4.54
SRSF11-212ENST00000475204 SMARCA2P51531 1590 aa43.38■■■■■ 4.54
SRSF11-212ENST00000475204 MROH2BQ7Z745 1585 aa43.29■■■■■ 4.52
SRSF11-212ENST00000475204 PEG3Q9GZU2 1588 aa43.29■■■■■ 4.52
SRSF11-212ENST00000475204 HMGXB3Q12766 1538 aa43.25■■■■■ 4.51
SRSF11-212ENST00000475204 BAZ1BQ9UIG0 1483 aaKnown RBP43.03■■■■■ 4.48
SRSF11-212ENST00000475204 WIZO95785 1651 aa42.89■■■■■ 4.46
SRSF11-212ENST00000475204 RSF1Q96T23 1441 aaPredicted RBP42.69■■■■■ 4.42
SRSF11-212ENST00000475204 NESP48681 1621 aa42.42■■■■■ 4.38
SRSF11-212ENST00000475204 TOP2AP11388 1531 aaKnown RBP42.38■■■■■ 4.37
SRSF11-212ENST00000475204 LAMC3Q9Y6N6 1575 aa42.36■■■■■ 4.37
SRSF11-212ENST00000475204 ERCC6Q03468 1493 aa42.24■■■■■ 4.35
SRSF11-212ENST00000475204 CADPSQ9ULU8 1353 aa42.08■■■■■ 4.33
SRSF11-212ENST00000475204 KIF21AQ7Z4S6 1674 aa42.07■■■■■ 4.33
SRSF11-212ENST00000475204 PDS5BQ9NTI5 1447 aa41.96■■■■■ 4.31
SRSF11-212ENST00000475204 THOC2Q8NI27 1593 aaKnown RBP41.93■■■■■ 4.3
SRSF11-212ENST00000475204 CUX2O14529 1486 aa41.92■■■■■ 4.3
SRSF11-212ENST00000475204 CFTRP13569 1480 aa41.85■■■■■ 4.29
SRSF11-212ENST00000475204 CCDC88BA6NC98 1476 aa41.83■■■■■ 4.29
SRSF11-212ENST00000475204 PRDM2Q13029 1718 aa41.8■■■■■ 4.28
SRSF11-212ENST00000475204 FANCD2Q9BXW9 1451 aa41.64■■■■■ 4.26
SRSF11-212ENST00000475204 CEP164Q9UPV0 1460 aa41.61■■■■■ 4.25
SRSF11-212ENST00000475204 MRC2Q9UBG0 1479 aa41.59■■■■■ 4.25
SRSF11-212ENST00000475204 WDR62O43379 1518 aa41.52■■■■■ 4.24
SRSF11-212ENST00000475204 SUPT5HO00267 1087 aaKnown RBP41.35■■■■■ 4.21
SRSF11-212ENST00000475204 URB2Q14146 1524 aaKnown RBP41.27■■■■■ 4.2
SRSF11-212ENST00000475204 TOPBP1Q92547 1522 aa40.98■■■■■ 4.15
SRSF11-212ENST00000475204 ABCC8Q09428 1581 aa40.96■■■■■ 4.15
SRSF11-212ENST00000475204 DNMBPQ6XZF7 1577 aa40.96■■■■■ 4.15
SRSF11-212ENST00000475204 IFT140Q96RY7 1462 aa40.73■■■■■ 4.11
SRSF11-212ENST00000475204 DNAJC5Q9H3Z4 198 aa40.73■■■■■ 4.11
SRSF11-212ENST00000475204 CUX1P39880 1505 aa40.64■■■■■ 4.1
SRSF11-212ENST00000475204 TARBP1Q13395 1621 aaKnown RBP40.64■■■■■ 4.1
SRSF11-212ENST00000475204 POLA1P09884 1462 aaPredicted RBP40.62■■■■■ 4.09
SRSF11-212ENST00000475204 ZNF608Q9ULD9 1512 aaPredicted RBP40.57■■■■■ 4.09
SRSF11-212ENST00000475204 EIF4G3O43432 1585 aaKnown RBP40.5■■■■■ 4.07
SRSF11-212ENST00000475204 FGD5Q6ZNL6 1462 aa40.49■■■■■ 4.07
SRSF11-212ENST00000475204 RAD54L2Q9Y4B4 1467 aa40.41■■■■■ 4.06
SRSF11-212ENST00000475204 SOGA1O94964 1423 aa40.38■■■■■ 4.05
SRSF11-212ENST00000475204 WDR97A6NE52 1622 aa40.34■■■■■ 4.05
SRSF11-212ENST00000475204 BIVM-ERCC5R4GMW8 1640 aa40.34■■■■■ 4.05
SRSF11-212ENST00000475204 TOP2BQ02880 1626 aa40.28■■■■■ 4.04
SRSF11-212ENST00000475204 AQRO60306 1485 aaKnown RBP eCLIP40.28■■■■■ 4.043e-16■□□□□ 8.9
SRSF11-212ENST00000475204 SYNJ1O43426 1573 aa40.26■■■■■ 4.04
SRSF11-212ENST00000475204 WRNQ14191 1432 aaPredicted RBP eCLIP40.24■■■■■ 4.03
SRSF11-212ENST00000475204 TDRD9Q8NDG6 1382 aaKnown RBP40.15■■■■■ 4.02
SRSF11-212ENST00000475204 ABCA10Q8WWZ4 1543 aa40.11■■■■■ 4.01
SRSF11-212ENST00000475204 CHD1O14646 1710 aa40.1■■■■■ 4.01
SRSF11-212ENST00000475204 PBRM1Q86U86 1689 aa40.07■■■■■ 4
SRSF11-212ENST00000475204 ABCA5Q8WWZ7 1642 aa40.05■■■■■ 4
SRSF11-212ENST00000475204 OSCARQ8IYS5 282 aa40.04■■■■■ 4
SRSF11-212ENST00000475204 GRIN2BQ13224 1484 aa39.96■■■■□ 3.99
SRSF11-212ENST00000475204 GAPVD1Q14C86 1478 aa39.96■■■■□ 3.99
SRSF11-212ENST00000475204 SNAPC4Q5SXM2 1469 aa39.94■■■■□ 3.98
SRSF11-212ENST00000475204 MAGI1Q96QZ7 1491 aaPredicted RBP39.91■■■■□ 3.98
SRSF11-212ENST00000475204 SYNJ2O15056 1496 aa39.74■■■■□ 3.95
SRSF11-212ENST00000475204 FBLN2P98095 1184 aa39.72■■■■□ 3.95
SRSF11-212ENST00000475204 ADAMTS12P58397 1594 aa39.65■■■■□ 3.94
SRSF11-212ENST00000475204 ERICH3Q5RHP9 1530 aa39.65■■■■□ 3.94
SRSF11-212ENST00000475204 CHMP7Q8WUX9 453 aaPredicted RBP39.62■■■■□ 3.93
SRSF11-212ENST00000475204 RIMBP3CA6NJZ7 1639 aa39.61■■■■□ 3.93
SRSF11-212ENST00000475204 RIMBP3BA6NNM3 1639 aa39.61■■■■□ 3.93
SRSF11-212ENST00000475204 RIMBP3Q9UFD9 1639 aa39.61■■■■□ 3.93
SRSF11-212ENST00000475204 CLASP1Q7Z460 1538 aa39.57■■■■□ 3.93
SRSF11-212ENST00000475204 ARHGEF11O15085 1522 aa39.52■■■■□ 3.92
SRSF11-212ENST00000475204 GRIN2AQ12879 1464 aa39.48■■■■□ 3.91
SRSF11-212ENST00000475204 FHAD1B1AJZ9 1412 aa39.47■■■■□ 3.91
SRSF11-212ENST00000475204 KIF27Q86VH2 1401 aa39.4■■■■□ 3.9
SRSF11-212ENST00000475204 CEP170Q5SW79 1584 aa39.34■■■■□ 3.89
SRSF11-212ENST00000475204 CUL7Q14999 1698 aa39.32■■■■□ 3.88
SRSF11-212ENST00000475204 NUP160Q12769 1436 aa39.31■■■■□ 3.88
SRSF11-212ENST00000475204 TRIM41Q8WV44 630 aa39.27■■■■□ 3.88
SRSF11-212ENST00000475204 IGF1RP08069 1367 aa39.25■■■■□ 3.87
SRSF11-212ENST00000475204 ARAP1Q96P48 1450 aa39.18■■■■□ 3.86
SRSF11-212ENST00000475204 SHROOM2Q13796 1616 aa39.14■■■■□ 3.86
SRSF11-212ENST00000475204 RUSC2Q8N2Y8 1516 aa39.08■■■■□ 3.85
SRSF11-212ENST00000475204 CYB5RLQ6IPT4 315 aa39.02■■■■□ 3.84
SRSF11-212ENST00000475204 CARMIL1Q5VZK9 1371 aa39.01■■■■□ 3.84
SRSF11-212ENST00000475204 ERCC6L2Q5T890 1561 aa38.99■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms